data_2I8E # _model_server_result.job_id suHg_nWnApo7RdEQrqnLAw _model_server_result.datetime_utc '2025-02-27 22:22:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i8e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":105}' # _entry.id 2I8E # _exptl.entry_id 2I8E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2I8E _cell.length_a 64.277 _cell.length_b 64.277 _cell.length_c 39.529 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I8E _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_765 -x+2,-y+1,z -1 0 0 0 -1 0 0 0 1 96.4155 55.665515 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 2 A ALA 2 1_555 A N MSE 3 A MSE 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale2 A C MSE 3 A MSE 3 1_555 A N LEU 4 A LEU 4 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.32 ? covale ? covale3 A C MSE 3 A MSE 3 1_555 A N LEU 4 A LEU 4 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.336 ? covale ? covale4 A C PHE 37 A PHE 37 1_555 A N MSE 38 A MSE 38 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale5 A C MSE 38 A MSE 38 1_555 A N GLY 39 A GLY 39 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2I8E _atom_sites.fract_transf_matrix[1][1] 0.015558 _atom_sites.fract_transf_matrix[1][2] 0.008982 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017964 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025298 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 102 1 IOD IOD . C 2 IOD A 1 103 2 IOD IOD . D 2 IOD A 1 104 3 IOD IOD . E 2 IOD A 1 105 4 IOD IOD . F 3 HOH A 1 106 1 HOH HOH . F 3 HOH A 2 107 2 HOH HOH . F 3 HOH A 3 108 3 HOH HOH . F 3 HOH A 4 109 4 HOH HOH . F 3 HOH A 5 110 5 HOH HOH . F 3 HOH A 6 111 6 HOH HOH . F 3 HOH A 7 112 7 HOH HOH . F 3 HOH A 8 113 8 HOH HOH . F 3 HOH A 9 114 9 HOH HOH . F 3 HOH A 10 115 10 HOH HOH . F 3 HOH A 11 116 11 HOH HOH . F 3 HOH A 12 117 12 HOH HOH . F 3 HOH A 13 118 13 HOH HOH . F 3 HOH A 14 119 14 HOH HOH . F 3 HOH A 15 120 15 HOH HOH . F 3 HOH A 16 121 16 HOH HOH . F 3 HOH A 17 122 17 HOH HOH . F 3 HOH A 18 123 18 HOH HOH . F 3 HOH A 19 124 19 HOH HOH . F 3 HOH A 20 125 20 HOH HOH . F 3 HOH A 21 126 21 HOH HOH . F 3 HOH A 22 127 22 HOH HOH . F 3 HOH A 23 128 23 HOH HOH . F 3 HOH A 24 129 24 HOH HOH . F 3 HOH A 25 130 25 HOH HOH . F 3 HOH A 26 131 26 HOH HOH . F 3 HOH A 27 132 27 HOH HOH . F 3 HOH A 28 133 28 HOH HOH . F 3 HOH A 29 134 29 HOH HOH . F 3 HOH A 30 135 30 HOH HOH . F 3 HOH A 31 136 31 HOH HOH . F 3 HOH A 32 137 32 HOH HOH . F 3 HOH A 33 138 33 HOH HOH . F 3 HOH A 34 139 34 HOH HOH . F 3 HOH A 35 140 35 HOH HOH . F 3 HOH A 36 141 36 HOH HOH . F 3 HOH A 37 142 37 HOH HOH . F 3 HOH A 38 143 38 HOH HOH . F 3 HOH A 39 144 39 HOH HOH . F 3 HOH A 40 145 40 HOH HOH . F 3 HOH A 41 146 41 HOH HOH . F 3 HOH A 42 147 42 HOH HOH . F 3 HOH A 43 148 43 HOH HOH . F 3 HOH A 44 149 44 HOH HOH . F 3 HOH A 45 150 45 HOH HOH . F 3 HOH A 46 151 46 HOH HOH . F 3 HOH A 47 152 47 HOH HOH . F 3 HOH A 48 153 48 HOH HOH . F 3 HOH A 49 154 49 HOH HOH . F 3 HOH A 50 155 50 HOH HOH . F 3 HOH A 51 156 51 HOH HOH . F 3 HOH A 52 157 52 HOH HOH . F 3 HOH A 53 158 53 HOH HOH . F 3 HOH A 54 159 54 HOH HOH . F 3 HOH A 55 160 55 HOH HOH . F 3 HOH A 56 161 56 HOH HOH . F 3 HOH A 57 162 57 HOH HOH . F 3 HOH A 58 163 58 HOH HOH . F 3 HOH A 59 164 59 HOH HOH . F 3 HOH A 60 165 60 HOH HOH . F 3 HOH A 61 166 61 HOH HOH . F 3 HOH A 62 167 62 HOH HOH . F 3 HOH A 63 168 63 HOH HOH . F 3 HOH A 64 169 64 HOH HOH . F 3 HOH A 65 170 65 HOH HOH . F 3 HOH A 66 171 66 HOH HOH . F 3 HOH A 67 172 67 HOH HOH . F 3 HOH A 68 173 68 HOH HOH . F 3 HOH A 69 174 69 HOH HOH . F 3 HOH A 70 175 70 HOH HOH . F 3 HOH A 71 176 71 HOH HOH . F 3 HOH A 72 177 72 HOH HOH . F 3 HOH A 73 178 73 HOH HOH . F 3 HOH A 74 179 74 HOH HOH . F 3 HOH A 75 180 75 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 27.953 _atom_site.Cartn_y 27.3 _atom_site.Cartn_z 11.645 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 27.45 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 105 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #