data_2I8U # _model_server_result.job_id t43tIBGbxz0-j_xoK9zn5Q _model_server_result.datetime_utc '2024-10-19 03:59:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i8u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":800}' # _entry.id 2I8U # _exptl.entry_id 2I8U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.201 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "GUANOSINE-5'-DIPHOSPHATE" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I8U _cell.length_a 49.588 _cell.length_b 81.151 _cell.length_c 97.982 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I8U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 50 A GLY 50 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc2 A OE2 GLU 70 A GLU 70 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc3 A OE1 GLN 123 A GLN 123 1_555 C CA CA . A CA 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc4 C CA CA . A CA 202 1_555 D O2B GDP . A GDP 820 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc5 C CA CA . A CA 202 1_555 D O2A GDP . A GDP 820 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc6 C CA CA . A CA 202 1_555 G O HOH . A HOH 1049 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc7 B O GLY 50 B GLY 50 1_555 E CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc8 B OE2 GLU 70 B GLU 70 1_555 E CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc9 B OE1 GLN 123 B GLN 123 1_555 E CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc10 E CA CA . B CA 201 1_555 F O2A GDP . B GDP 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc11 E CA CA . B CA 201 1_555 F O2B GDP . B GDP 800 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc12 E CA CA . B CA 201 1_555 H O HOH . B HOH 1039 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? # _chem_comp.formula 'C10 H15 N5 O11 P2' _chem_comp.formula_weight 443.201 _chem_comp.id GDP _chem_comp.mon_nstd_flag n _chem_comp.name "GUANOSINE-5'-DIPHOSPHATE" _chem_comp.type 'rna linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PB O1B GDP doub 70 n n PB O2B GDP sing 71 n n PB O3B GDP sing 72 n n PB O3A GDP sing 73 n n O2B HOB2 GDP sing 74 n n O3B HOB3 GDP sing 75 n n O3A PA GDP sing 76 n n PA O1A GDP doub 77 n n PA O2A GDP sing 78 n n PA O5' GDP sing 79 n n O2A HOA2 GDP sing 80 n n O5' C5' GDP sing 81 n n C5' C4' GDP sing 82 n n C5' H5' GDP sing 83 n n C5' "H5''" GDP sing 84 n n C4' O4' GDP sing 85 n n C4' C3' GDP sing 86 n n C4' H4' GDP sing 87 n n O4' C1' GDP sing 88 n n C3' O3' GDP sing 89 n n C3' C2' GDP sing 90 n n C3' H3' GDP sing 91 n n O3' HO3' GDP sing 92 n n C2' O2' GDP sing 93 n n C2' C1' GDP sing 94 n n C2' H2' GDP sing 95 n n O2' HO2' GDP sing 96 n n C1' N9 GDP sing 97 n n C1' H1' GDP sing 98 n n N9 C8 GDP sing 99 n y N9 C4 GDP sing 100 n y C8 N7 GDP doub 101 n y C8 H8 GDP sing 102 n n N7 C5 GDP sing 103 n y C5 C6 GDP sing 104 n n C5 C4 GDP doub 105 n y C6 O6 GDP doub 106 n n C6 N1 GDP sing 107 n n N1 C2 GDP sing 108 n n N1 HN1 GDP sing 109 n n C2 N2 GDP sing 110 n n C2 N3 GDP doub 111 n n N2 HN21 GDP sing 112 n n N2 HN22 GDP sing 113 n n N3 C4 GDP sing 114 n n # _atom_sites.entry_id 2I8U _atom_sites.fract_transf_matrix[1][1] 0.020166 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012323 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 202 2 CA CA . D 3 GDP A 1 820 820 GDP GDP . E 2 CA B 1 201 1 CA CA . F 3 GDP B 1 800 800 GDP GDP . G 4 HOH A 1 821 2 HOH HOH . G 4 HOH A 2 822 5 HOH HOH . G 4 HOH A 3 823 8 HOH HOH . G 4 HOH A 4 824 11 HOH HOH . G 4 HOH A 5 825 13 HOH HOH . G 4 HOH A 6 826 14 HOH HOH . G 4 HOH A 7 827 16 HOH HOH . G 4 HOH A 8 828 19 HOH HOH . G 4 HOH A 9 829 20 HOH HOH . G 4 HOH A 10 830 21 HOH HOH . G 4 HOH A 11 831 22 HOH HOH . G 4 HOH A 12 832 26 HOH HOH . G 4 HOH A 13 833 27 HOH HOH . G 4 HOH A 14 834 28 HOH HOH . G 4 HOH A 15 835 33 HOH HOH . G 4 HOH A 16 836 36 HOH HOH . G 4 HOH A 17 837 37 HOH HOH . G 4 HOH A 18 838 40 HOH HOH . G 4 HOH A 19 839 42 HOH HOH . G 4 HOH A 20 840 44 HOH HOH . G 4 HOH A 21 841 46 HOH HOH . G 4 HOH A 22 842 47 HOH HOH . G 4 HOH A 23 843 48 HOH HOH . G 4 HOH A 24 844 49 HOH HOH . G 4 HOH A 25 845 50 HOH HOH . G 4 HOH A 26 846 51 HOH HOH . G 4 HOH A 27 847 53 HOH HOH . G 4 HOH A 28 848 54 HOH HOH . G 4 HOH A 29 849 56 HOH HOH . G 4 HOH A 30 850 57 HOH HOH . G 4 HOH A 31 851 60 HOH HOH . G 4 HOH A 32 852 61 HOH HOH . G 4 HOH A 33 853 62 HOH HOH . G 4 HOH A 34 854 63 HOH HOH . G 4 HOH A 35 855 64 HOH HOH . G 4 HOH A 36 856 66 HOH HOH . G 4 HOH A 37 857 68 HOH HOH . G 4 HOH A 38 858 73 HOH HOH . G 4 HOH A 39 859 74 HOH HOH . G 4 HOH A 40 860 78 HOH HOH . G 4 HOH A 41 861 81 HOH HOH . G 4 HOH A 42 862 83 HOH HOH . G 4 HOH A 43 863 85 HOH HOH . G 4 HOH A 44 864 89 HOH HOH . G 4 HOH A 45 865 92 HOH HOH . G 4 HOH A 46 866 93 HOH HOH . G 4 HOH A 47 867 94 HOH HOH . G 4 HOH A 48 868 95 HOH HOH . G 4 HOH A 49 869 96 HOH HOH . G 4 HOH A 50 870 99 HOH HOH . G 4 HOH A 51 871 100 HOH HOH . G 4 HOH A 52 872 103 HOH HOH . G 4 HOH A 53 873 105 HOH HOH . G 4 HOH A 54 874 111 HOH HOH . G 4 HOH A 55 875 113 HOH HOH . G 4 HOH A 56 876 114 HOH HOH . G 4 HOH A 57 877 117 HOH HOH . G 4 HOH A 58 878 118 HOH HOH . G 4 HOH A 59 879 120 HOH HOH . G 4 HOH A 60 880 129 HOH HOH . G 4 HOH A 61 881 130 HOH HOH . G 4 HOH A 62 882 131 HOH HOH . G 4 HOH A 63 883 133 HOH HOH . G 4 HOH A 64 884 134 HOH HOH . G 4 HOH A 65 885 138 HOH HOH . G 4 HOH A 66 886 141 HOH HOH . G 4 HOH A 67 887 143 HOH HOH . G 4 HOH A 68 888 144 HOH HOH . G 4 HOH A 69 889 146 HOH HOH . G 4 HOH A 70 890 147 HOH HOH . G 4 HOH A 71 891 149 HOH HOH . G 4 HOH A 72 892 151 HOH HOH . G 4 HOH A 73 893 152 HOH HOH . G 4 HOH A 74 894 158 HOH HOH . G 4 HOH A 75 895 159 HOH HOH . G 4 HOH A 76 896 160 HOH HOH . G 4 HOH A 77 897 161 HOH HOH . G 4 HOH A 78 898 165 HOH HOH . G 4 HOH A 79 899 167 HOH HOH . G 4 HOH A 80 900 168 HOH HOH . G 4 HOH A 81 901 169 HOH HOH . G 4 HOH A 82 902 171 HOH HOH . G 4 HOH A 83 903 172 HOH HOH . G 4 HOH A 84 904 173 HOH HOH . G 4 HOH A 85 905 174 HOH HOH . G 4 HOH A 86 906 175 HOH HOH . G 4 HOH A 87 907 178 HOH HOH . G 4 HOH A 88 908 185 HOH HOH . G 4 HOH A 89 909 186 HOH HOH . G 4 HOH A 90 910 189 HOH HOH . G 4 HOH A 91 911 190 HOH HOH . G 4 HOH A 92 912 191 HOH HOH . G 4 HOH A 93 913 192 HOH HOH . G 4 HOH A 94 914 193 HOH HOH . G 4 HOH A 95 915 196 HOH HOH . G 4 HOH A 96 916 199 HOH HOH . G 4 HOH A 97 917 200 HOH HOH . G 4 HOH A 98 918 201 HOH HOH . G 4 HOH A 99 919 202 HOH HOH . G 4 HOH A 100 920 203 HOH HOH . G 4 HOH A 101 921 204 HOH HOH . G 4 HOH A 102 922 207 HOH HOH . G 4 HOH A 103 923 210 HOH HOH . G 4 HOH A 104 924 214 HOH HOH . G 4 HOH A 105 925 215 HOH HOH . G 4 HOH A 106 926 217 HOH HOH . G 4 HOH A 107 927 220 HOH HOH . G 4 HOH A 108 928 221 HOH HOH . G 4 HOH A 109 929 224 HOH HOH . G 4 HOH A 110 930 227 HOH HOH . G 4 HOH A 111 931 228 HOH HOH . G 4 HOH A 112 932 230 HOH HOH . G 4 HOH A 113 933 232 HOH HOH . G 4 HOH A 114 934 233 HOH HOH . G 4 HOH A 115 935 235 HOH HOH . G 4 HOH A 116 936 240 HOH HOH . G 4 HOH A 117 937 244 HOH HOH . G 4 HOH A 118 938 248 HOH HOH . G 4 HOH A 119 939 249 HOH HOH . G 4 HOH A 120 940 251 HOH HOH . G 4 HOH A 121 941 253 HOH HOH . G 4 HOH A 122 942 255 HOH HOH . G 4 HOH A 123 943 263 HOH HOH . G 4 HOH A 124 944 265 HOH HOH . G 4 HOH A 125 945 267 HOH HOH . G 4 HOH A 126 946 268 HOH HOH . G 4 HOH A 127 947 269 HOH HOH . G 4 HOH A 128 948 270 HOH HOH . G 4 HOH A 129 949 272 HOH HOH . G 4 HOH A 130 950 273 HOH HOH . G 4 HOH A 131 951 275 HOH HOH . G 4 HOH A 132 952 276 HOH HOH . G 4 HOH A 133 953 277 HOH HOH . G 4 HOH A 134 954 279 HOH HOH . G 4 HOH A 135 955 280 HOH HOH . G 4 HOH A 136 956 283 HOH HOH . G 4 HOH A 137 957 284 HOH HOH . G 4 HOH A 138 958 286 HOH HOH . G 4 HOH A 139 959 287 HOH HOH . G 4 HOH A 140 960 289 HOH HOH . G 4 HOH A 141 961 291 HOH HOH . G 4 HOH A 142 962 293 HOH HOH . G 4 HOH A 143 963 295 HOH HOH . G 4 HOH A 144 964 296 HOH HOH . G 4 HOH A 145 965 297 HOH HOH . G 4 HOH A 146 966 298 HOH HOH . G 4 HOH A 147 967 299 HOH HOH . G 4 HOH A 148 968 302 HOH HOH . G 4 HOH A 149 969 304 HOH HOH . G 4 HOH A 150 970 306 HOH HOH . G 4 HOH A 151 971 307 HOH HOH . G 4 HOH A 152 972 308 HOH HOH . G 4 HOH A 153 973 309 HOH HOH . G 4 HOH A 154 974 310 HOH HOH . G 4 HOH A 155 975 311 HOH HOH . G 4 HOH A 156 976 314 HOH HOH . G 4 HOH A 157 977 315 HOH HOH . G 4 HOH A 158 978 317 HOH HOH . G 4 HOH A 159 979 318 HOH HOH . G 4 HOH A 160 980 319 HOH HOH . G 4 HOH A 161 981 321 HOH HOH . G 4 HOH A 162 982 327 HOH HOH . G 4 HOH A 163 983 328 HOH HOH . G 4 HOH A 164 984 329 HOH HOH . G 4 HOH A 165 985 331 HOH HOH . G 4 HOH A 166 986 333 HOH HOH . G 4 HOH A 167 987 334 HOH HOH . G 4 HOH A 168 988 336 HOH HOH . G 4 HOH A 169 989 338 HOH HOH . G 4 HOH A 170 990 339 HOH HOH . G 4 HOH A 171 991 340 HOH HOH . G 4 HOH A 172 992 341 HOH HOH . G 4 HOH A 173 993 344 HOH HOH . G 4 HOH A 174 994 346 HOH HOH . G 4 HOH A 175 995 347 HOH HOH . G 4 HOH A 176 996 349 HOH HOH . G 4 HOH A 177 997 350 HOH HOH . G 4 HOH A 178 998 351 HOH HOH . G 4 HOH A 179 999 355 HOH HOH . G 4 HOH A 180 1000 356 HOH HOH . G 4 HOH A 181 1001 358 HOH HOH . G 4 HOH A 182 1002 360 HOH HOH . G 4 HOH A 183 1003 362 HOH HOH . G 4 HOH A 184 1004 364 HOH HOH . G 4 HOH A 185 1005 366 HOH HOH . G 4 HOH A 186 1006 370 HOH HOH . G 4 HOH A 187 1007 372 HOH HOH . G 4 HOH A 188 1008 379 HOH HOH . G 4 HOH A 189 1009 383 HOH HOH . G 4 HOH A 190 1010 384 HOH HOH . G 4 HOH A 191 1011 386 HOH HOH . G 4 HOH A 192 1012 387 HOH HOH . G 4 HOH A 193 1013 388 HOH HOH . G 4 HOH A 194 1014 394 HOH HOH . G 4 HOH A 195 1015 400 HOH HOH . G 4 HOH A 196 1016 401 HOH HOH . G 4 HOH A 197 1017 402 HOH HOH . G 4 HOH A 198 1018 403 HOH HOH . G 4 HOH A 199 1019 406 HOH HOH . G 4 HOH A 200 1020 409 HOH HOH . G 4 HOH A 201 1021 410 HOH HOH . G 4 HOH A 202 1022 414 HOH HOH . G 4 HOH A 203 1023 415 HOH HOH . G 4 HOH A 204 1024 420 HOH HOH . G 4 HOH A 205 1025 426 HOH HOH . G 4 HOH A 206 1026 431 HOH HOH . G 4 HOH A 207 1027 434 HOH HOH . G 4 HOH A 208 1028 435 HOH HOH . G 4 HOH A 209 1029 440 HOH HOH . G 4 HOH A 210 1030 443 HOH HOH . G 4 HOH A 211 1031 447 HOH HOH . G 4 HOH A 212 1032 452 HOH HOH . G 4 HOH A 213 1033 453 HOH HOH . G 4 HOH A 214 1034 454 HOH HOH . G 4 HOH A 215 1035 459 HOH HOH . G 4 HOH A 216 1036 462 HOH HOH . G 4 HOH A 217 1037 464 HOH HOH . G 4 HOH A 218 1038 466 HOH HOH . G 4 HOH A 219 1039 469 HOH HOH . G 4 HOH A 220 1040 473 HOH HOH . G 4 HOH A 221 1041 477 HOH HOH . G 4 HOH A 222 1042 480 HOH HOH . G 4 HOH A 223 1043 481 HOH HOH . G 4 HOH A 224 1044 489 HOH HOH . G 4 HOH A 225 1045 490 HOH HOH . G 4 HOH A 226 1046 491 HOH HOH . G 4 HOH A 227 1047 498 HOH HOH . G 4 HOH A 228 1048 501 HOH HOH . G 4 HOH A 229 1049 502 HOH HOH . G 4 HOH A 230 1050 504 HOH HOH . G 4 HOH A 231 1051 505 HOH HOH . G 4 HOH A 232 1052 507 HOH HOH . G 4 HOH A 233 1053 508 HOH HOH . G 4 HOH A 234 1054 509 HOH HOH . G 4 HOH A 235 1055 511 HOH HOH . G 4 HOH A 236 1056 515 HOH HOH . G 4 HOH A 237 1057 516 HOH HOH . G 4 HOH A 238 1058 517 HOH HOH . G 4 HOH A 239 1059 521 HOH HOH . G 4 HOH A 240 1060 523 HOH HOH . G 4 HOH A 241 1061 524 HOH HOH . G 4 HOH A 242 1062 527 HOH HOH . G 4 HOH A 243 1063 529 HOH HOH . G 4 HOH A 244 1064 531 HOH HOH . G 4 HOH A 245 1065 533 HOH HOH . G 4 HOH A 246 1066 534 HOH HOH . G 4 HOH A 247 1067 535 HOH HOH . G 4 HOH A 248 1068 536 HOH HOH . G 4 HOH A 249 1069 538 HOH HOH . G 4 HOH A 250 1070 539 HOH HOH . G 4 HOH A 251 1071 541 HOH HOH . G 4 HOH A 252 1072 546 HOH HOH . G 4 HOH A 253 1073 547 HOH HOH . G 4 HOH A 254 1074 556 HOH HOH . G 4 HOH A 255 1075 561 HOH HOH . G 4 HOH A 256 1076 563 HOH HOH . G 4 HOH A 257 1077 567 HOH HOH . G 4 HOH A 258 1078 568 HOH HOH . G 4 HOH A 259 1079 571 HOH HOH . G 4 HOH A 260 1080 576 HOH HOH . G 4 HOH A 261 1081 577 HOH HOH . G 4 HOH A 262 1082 580 HOH HOH . G 4 HOH A 263 1083 583 HOH HOH . G 4 HOH A 264 1084 585 HOH HOH . G 4 HOH A 265 1085 608 HOH HOH . G 4 HOH A 266 1086 613 HOH HOH . G 4 HOH A 267 1087 629 HOH HOH . G 4 HOH A 268 1088 633 HOH HOH . G 4 HOH A 269 1089 635 HOH HOH . G 4 HOH A 270 1090 642 HOH HOH . G 4 HOH A 271 1091 656 HOH HOH . G 4 HOH A 272 1092 677 HOH HOH . G 4 HOH A 273 1093 685 HOH HOH . G 4 HOH A 274 1094 689 HOH HOH . H 4 HOH B 1 801 3 HOH HOH . H 4 HOH B 2 802 4 HOH HOH . H 4 HOH B 3 803 6 HOH HOH . H 4 HOH B 4 804 7 HOH HOH . H 4 HOH B 5 805 9 HOH HOH . H 4 HOH B 6 806 10 HOH HOH . H 4 HOH B 7 807 12 HOH HOH . H 4 HOH B 8 808 15 HOH HOH . H 4 HOH B 9 809 17 HOH HOH . H 4 HOH B 10 810 18 HOH HOH . H 4 HOH B 11 811 23 HOH HOH . H 4 HOH B 12 812 24 HOH HOH . H 4 HOH B 13 813 25 HOH HOH . H 4 HOH B 14 814 29 HOH HOH . H 4 HOH B 15 815 30 HOH HOH . H 4 HOH B 16 816 31 HOH HOH . H 4 HOH B 17 817 32 HOH HOH . H 4 HOH B 18 818 34 HOH HOH . H 4 HOH B 19 819 35 HOH HOH . H 4 HOH B 20 820 38 HOH HOH . H 4 HOH B 21 821 39 HOH HOH . H 4 HOH B 22 822 41 HOH HOH . H 4 HOH B 23 823 43 HOH HOH . H 4 HOH B 24 824 45 HOH HOH . H 4 HOH B 25 825 52 HOH HOH . H 4 HOH B 26 826 55 HOH HOH . H 4 HOH B 27 827 58 HOH HOH . H 4 HOH B 28 828 59 HOH HOH . H 4 HOH B 29 829 65 HOH HOH . H 4 HOH B 30 830 67 HOH HOH . H 4 HOH B 31 831 69 HOH HOH . H 4 HOH B 32 832 70 HOH HOH . H 4 HOH B 33 833 71 HOH HOH . H 4 HOH B 34 834 72 HOH HOH . H 4 HOH B 35 835 75 HOH HOH . H 4 HOH B 36 836 76 HOH HOH . H 4 HOH B 37 837 77 HOH HOH . H 4 HOH B 38 838 79 HOH HOH . H 4 HOH B 39 839 80 HOH HOH . H 4 HOH B 40 840 82 HOH HOH . H 4 HOH B 41 841 84 HOH HOH . H 4 HOH B 42 842 86 HOH HOH . H 4 HOH B 43 843 87 HOH HOH . H 4 HOH B 44 844 88 HOH HOH . H 4 HOH B 45 845 90 HOH HOH . H 4 HOH B 46 846 91 HOH HOH . H 4 HOH B 47 847 97 HOH HOH . H 4 HOH B 48 848 98 HOH HOH . H 4 HOH B 49 849 101 HOH HOH . H 4 HOH B 50 850 102 HOH HOH . H 4 HOH B 51 851 104 HOH HOH . H 4 HOH B 52 852 106 HOH HOH . H 4 HOH B 53 853 107 HOH HOH . H 4 HOH B 54 854 108 HOH HOH . H 4 HOH B 55 855 109 HOH HOH . H 4 HOH B 56 856 110 HOH HOH . H 4 HOH B 57 857 112 HOH HOH . H 4 HOH B 58 858 115 HOH HOH . H 4 HOH B 59 859 116 HOH HOH . H 4 HOH B 60 860 119 HOH HOH . H 4 HOH B 61 861 121 HOH HOH . H 4 HOH B 62 862 122 HOH HOH . H 4 HOH B 63 863 123 HOH HOH . H 4 HOH B 64 864 124 HOH HOH . H 4 HOH B 65 865 125 HOH HOH . H 4 HOH B 66 866 126 HOH HOH . H 4 HOH B 67 867 127 HOH HOH . H 4 HOH B 68 868 128 HOH HOH . H 4 HOH B 69 869 132 HOH HOH . H 4 HOH B 70 870 135 HOH HOH . H 4 HOH B 71 871 136 HOH HOH . H 4 HOH B 72 872 137 HOH HOH . H 4 HOH B 73 873 139 HOH HOH . H 4 HOH B 74 874 140 HOH HOH . H 4 HOH B 75 875 142 HOH HOH . H 4 HOH B 76 876 145 HOH HOH . H 4 HOH B 77 877 148 HOH HOH . H 4 HOH B 78 878 150 HOH HOH . H 4 HOH B 79 879 153 HOH HOH . H 4 HOH B 80 880 154 HOH HOH . H 4 HOH B 81 881 155 HOH HOH . H 4 HOH B 82 882 156 HOH HOH . H 4 HOH B 83 883 157 HOH HOH . H 4 HOH B 84 884 162 HOH HOH . H 4 HOH B 85 885 163 HOH HOH . H 4 HOH B 86 886 164 HOH HOH . H 4 HOH B 87 887 166 HOH HOH . H 4 HOH B 88 888 170 HOH HOH . H 4 HOH B 89 889 176 HOH HOH . H 4 HOH B 90 890 177 HOH HOH . H 4 HOH B 91 891 179 HOH HOH . H 4 HOH B 92 892 180 HOH HOH . H 4 HOH B 93 893 181 HOH HOH . H 4 HOH B 94 894 182 HOH HOH . H 4 HOH B 95 895 183 HOH HOH . H 4 HOH B 96 896 184 HOH HOH . H 4 HOH B 97 897 187 HOH HOH . H 4 HOH B 98 898 188 HOH HOH . H 4 HOH B 99 899 194 HOH HOH . H 4 HOH B 100 900 195 HOH HOH . H 4 HOH B 101 901 197 HOH HOH . H 4 HOH B 102 902 198 HOH HOH . H 4 HOH B 103 903 205 HOH HOH . H 4 HOH B 104 904 206 HOH HOH . H 4 HOH B 105 905 208 HOH HOH . H 4 HOH B 106 906 209 HOH HOH . H 4 HOH B 107 907 211 HOH HOH . H 4 HOH B 108 908 212 HOH HOH . H 4 HOH B 109 909 213 HOH HOH . H 4 HOH B 110 910 216 HOH HOH . H 4 HOH B 111 911 218 HOH HOH . H 4 HOH B 112 912 219 HOH HOH . H 4 HOH B 113 913 222 HOH HOH . H 4 HOH B 114 914 223 HOH HOH . H 4 HOH B 115 915 225 HOH HOH . H 4 HOH B 116 916 226 HOH HOH . H 4 HOH B 117 917 229 HOH HOH . H 4 HOH B 118 918 231 HOH HOH . H 4 HOH B 119 919 234 HOH HOH . H 4 HOH B 120 920 236 HOH HOH . H 4 HOH B 121 921 237 HOH HOH . H 4 HOH B 122 922 238 HOH HOH . H 4 HOH B 123 923 239 HOH HOH . H 4 HOH B 124 924 241 HOH HOH . H 4 HOH B 125 925 242 HOH HOH . H 4 HOH B 126 926 243 HOH HOH . H 4 HOH B 127 927 245 HOH HOH . H 4 HOH B 128 928 246 HOH HOH . H 4 HOH B 129 929 247 HOH HOH . H 4 HOH B 130 930 250 HOH HOH . H 4 HOH B 131 931 252 HOH HOH . H 4 HOH B 132 932 254 HOH HOH . H 4 HOH B 133 933 256 HOH HOH . H 4 HOH B 134 934 257 HOH HOH . H 4 HOH B 135 935 259 HOH HOH . H 4 HOH B 136 936 260 HOH HOH . H 4 HOH B 137 937 261 HOH HOH . H 4 HOH B 138 938 262 HOH HOH . H 4 HOH B 139 939 264 HOH HOH . H 4 HOH B 140 940 266 HOH HOH . H 4 HOH B 141 941 271 HOH HOH . H 4 HOH B 142 942 274 HOH HOH . H 4 HOH B 143 943 278 HOH HOH . H 4 HOH B 144 944 281 HOH HOH . H 4 HOH B 145 945 282 HOH HOH . H 4 HOH B 146 946 285 HOH HOH . H 4 HOH B 147 947 288 HOH HOH . H 4 HOH B 148 948 290 HOH HOH . H 4 HOH B 149 949 292 HOH HOH . H 4 HOH B 150 950 294 HOH HOH . H 4 HOH B 151 951 300 HOH HOH . H 4 HOH B 152 952 301 HOH HOH . H 4 HOH B 153 953 303 HOH HOH . H 4 HOH B 154 954 305 HOH HOH . H 4 HOH B 155 955 312 HOH HOH . H 4 HOH B 156 956 313 HOH HOH . H 4 HOH B 157 957 316 HOH HOH . H 4 HOH B 158 958 320 HOH HOH . H 4 HOH B 159 959 322 HOH HOH . H 4 HOH B 160 960 323 HOH HOH . H 4 HOH B 161 961 324 HOH HOH . H 4 HOH B 162 962 326 HOH HOH . H 4 HOH B 163 963 330 HOH HOH . H 4 HOH B 164 964 332 HOH HOH . H 4 HOH B 165 965 335 HOH HOH . H 4 HOH B 166 966 337 HOH HOH . H 4 HOH B 167 967 342 HOH HOH . H 4 HOH B 168 968 343 HOH HOH . H 4 HOH B 169 969 345 HOH HOH . H 4 HOH B 170 970 348 HOH HOH . H 4 HOH B 171 971 352 HOH HOH . H 4 HOH B 172 972 353 HOH HOH . H 4 HOH B 173 973 357 HOH HOH . H 4 HOH B 174 974 359 HOH HOH . H 4 HOH B 175 975 361 HOH HOH . H 4 HOH B 176 976 363 HOH HOH . H 4 HOH B 177 977 365 HOH HOH . H 4 HOH B 178 978 367 HOH HOH . H 4 HOH B 179 979 368 HOH HOH . H 4 HOH B 180 980 369 HOH HOH . H 4 HOH B 181 981 371 HOH HOH . H 4 HOH B 182 982 373 HOH HOH . H 4 HOH B 183 983 374 HOH HOH . H 4 HOH B 184 984 375 HOH HOH . H 4 HOH B 185 985 376 HOH HOH . H 4 HOH B 186 986 377 HOH HOH . H 4 HOH B 187 987 378 HOH HOH . H 4 HOH B 188 988 380 HOH HOH . H 4 HOH B 189 989 381 HOH HOH . H 4 HOH B 190 990 382 HOH HOH . H 4 HOH B 191 991 385 HOH HOH . H 4 HOH B 192 992 389 HOH HOH . H 4 HOH B 193 993 390 HOH HOH . H 4 HOH B 194 994 391 HOH HOH . H 4 HOH B 195 995 392 HOH HOH . H 4 HOH B 196 996 393 HOH HOH . H 4 HOH B 197 997 395 HOH HOH . H 4 HOH B 198 998 396 HOH HOH . H 4 HOH B 199 999 397 HOH HOH . H 4 HOH B 200 1000 399 HOH HOH . H 4 HOH B 201 1001 407 HOH HOH . H 4 HOH B 202 1002 408 HOH HOH . H 4 HOH B 203 1003 411 HOH HOH . H 4 HOH B 204 1004 412 HOH HOH . H 4 HOH B 205 1005 417 HOH HOH . H 4 HOH B 206 1006 418 HOH HOH . H 4 HOH B 207 1007 421 HOH HOH . H 4 HOH B 208 1008 422 HOH HOH . H 4 HOH B 209 1009 423 HOH HOH . H 4 HOH B 210 1010 428 HOH HOH . H 4 HOH B 211 1011 429 HOH HOH . H 4 HOH B 212 1012 430 HOH HOH . H 4 HOH B 213 1013 432 HOH HOH . H 4 HOH B 214 1014 433 HOH HOH . H 4 HOH B 215 1015 436 HOH HOH . H 4 HOH B 216 1016 441 HOH HOH . H 4 HOH B 217 1017 442 HOH HOH . H 4 HOH B 218 1018 444 HOH HOH . H 4 HOH B 219 1019 446 HOH HOH . H 4 HOH B 220 1020 448 HOH HOH . H 4 HOH B 221 1021 449 HOH HOH . H 4 HOH B 222 1022 451 HOH HOH . H 4 HOH B 223 1023 455 HOH HOH . H 4 HOH B 224 1024 456 HOH HOH . H 4 HOH B 225 1025 461 HOH HOH . H 4 HOH B 226 1026 467 HOH HOH . H 4 HOH B 227 1027 468 HOH HOH . H 4 HOH B 228 1028 470 HOH HOH . H 4 HOH B 229 1029 475 HOH HOH . H 4 HOH B 230 1030 476 HOH HOH . H 4 HOH B 231 1031 478 HOH HOH . H 4 HOH B 232 1032 479 HOH HOH . H 4 HOH B 233 1033 482 HOH HOH . H 4 HOH B 234 1034 483 HOH HOH . H 4 HOH B 235 1035 484 HOH HOH . H 4 HOH B 236 1036 488 HOH HOH . H 4 HOH B 237 1037 496 HOH HOH . H 4 HOH B 238 1038 497 HOH HOH . H 4 HOH B 239 1039 499 HOH HOH . H 4 HOH B 240 1040 500 HOH HOH . H 4 HOH B 241 1041 503 HOH HOH . H 4 HOH B 242 1042 506 HOH HOH . H 4 HOH B 243 1043 510 HOH HOH . H 4 HOH B 244 1044 512 HOH HOH . H 4 HOH B 245 1045 513 HOH HOH . H 4 HOH B 246 1046 514 HOH HOH . H 4 HOH B 247 1047 518 HOH HOH . H 4 HOH B 248 1048 519 HOH HOH . H 4 HOH B 249 1049 520 HOH HOH . H 4 HOH B 250 1050 522 HOH HOH . H 4 HOH B 251 1051 525 HOH HOH . H 4 HOH B 252 1052 526 HOH HOH . H 4 HOH B 253 1053 528 HOH HOH . H 4 HOH B 254 1054 530 HOH HOH . H 4 HOH B 255 1055 532 HOH HOH . H 4 HOH B 256 1056 550 HOH HOH . H 4 HOH B 257 1057 553 HOH HOH . H 4 HOH B 258 1058 565 HOH HOH . H 4 HOH B 259 1059 569 HOH HOH . H 4 HOH B 260 1060 586 HOH HOH . H 4 HOH B 261 1061 596 HOH HOH . H 4 HOH B 262 1062 601 HOH HOH . H 4 HOH B 263 1063 602 HOH HOH . H 4 HOH B 264 1064 605 HOH HOH . H 4 HOH B 265 1065 606 HOH HOH . H 4 HOH B 266 1066 607 HOH HOH . H 4 HOH B 267 1067 609 HOH HOH . H 4 HOH B 268 1068 610 HOH HOH . H 4 HOH B 269 1069 616 HOH HOH . H 4 HOH B 270 1070 617 HOH HOH . H 4 HOH B 271 1071 620 HOH HOH . H 4 HOH B 272 1072 621 HOH HOH . H 4 HOH B 273 1073 622 HOH HOH . H 4 HOH B 274 1074 624 HOH HOH . H 4 HOH B 275 1075 637 HOH HOH . H 4 HOH B 276 1076 638 HOH HOH . H 4 HOH B 277 1077 655 HOH HOH . H 4 HOH B 278 1078 660 HOH HOH . H 4 HOH B 279 1079 661 HOH HOH . H 4 HOH B 280 1080 663 HOH HOH . H 4 HOH B 281 1081 665 HOH HOH . H 4 HOH B 282 1082 670 HOH HOH . H 4 HOH B 283 1083 674 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PB GDP . . . F 3 56.025 68.44 47.164 1 6.84 ? PB GDP 800 B 1 HETATM 2 O O1B GDP . . . F 3 56.203 68.918 45.745 1 9.83 ? O1B GDP 800 B 1 HETATM 3 O O2B GDP . . . F 3 56.074 69.573 48.157 1 7.37 ? O2B GDP 800 B 1 HETATM 4 O O3B GDP . . . F 3 56.995 67.345 47.537 1 7.52 ? O3B GDP 800 B 1 HETATM 5 O O3A GDP . . . F 3 54.649 67.617 47.297 1 9.41 ? O3A GDP 800 B 1 HETATM 6 P PA GDP . . . F 3 53.165 67.869 47.851 1 6.92 ? PA GDP 800 B 1 HETATM 7 O O1A GDP . . . F 3 52.174 68.015 46.726 1 7.67 ? O1A GDP 800 B 1 HETATM 8 O O2A GDP . . . F 3 53.157 68.939 48.909 1 6.79 ? O2A GDP 800 B 1 HETATM 9 O O5' GDP . . . F 3 52.897 66.421 48.491 1 9.09 ? O5' GDP 800 B 1 HETATM 10 C C5' GDP . . . F 3 53.359 66.065 49.789 1 8.3 ? C5' GDP 800 B 1 HETATM 11 C C4' GDP . . . F 3 53.886 64.633 49.767 1 7.94 ? C4' GDP 800 B 1 HETATM 12 O O4' GDP . . . F 3 52.981 63.718 49.144 1 7.61 ? O4' GDP 800 B 1 HETATM 13 C C3' GDP . . . F 3 55.187 64.475 48.993 1 8.21 ? C3' GDP 800 B 1 HETATM 14 O O3' GDP . . . F 3 55.932 63.411 49.598 1 9.02 ? O3' GDP 800 B 1 HETATM 15 C C2' GDP . . . F 3 54.723 64.048 47.609 1 7.96 ? C2' GDP 800 B 1 HETATM 16 O O2' GDP . . . F 3 55.643 63.212 46.911 1 8.35 ? O2' GDP 800 B 1 HETATM 17 C C1' GDP . . . F 3 53.538 63.167 47.945 1 7.5 ? C1' GDP 800 B 1 HETATM 18 N N9 GDP . . . F 3 52.368 63.177 47.042 1 7.33 ? N9 GDP 800 B 1 HETATM 19 C C8 GDP . . . F 3 51.77 64.24 46.483 1 7.45 ? C8 GDP 800 B 1 HETATM 20 N N7 GDP . . . F 3 50.688 63.868 45.769 1 7.38 ? N7 GDP 800 B 1 HETATM 21 C C5 GDP . . . F 3 50.591 62.532 45.893 1 7.3 ? C5 GDP 800 B 1 HETATM 22 C C6 GDP . . . F 3 49.681 61.477 45.402 1 7.25 ? C6 GDP 800 B 1 HETATM 23 O O6 GDP . . . F 3 48.689 61.73 44.692 1 7.64 ? O6 GDP 800 B 1 HETATM 24 N N1 GDP . . . F 3 49.969 60.233 45.793 1 7.34 ? N1 GDP 800 B 1 HETATM 25 C C2 GDP . . . F 3 51.005 59.877 46.561 1 7.69 ? C2 GDP 800 B 1 HETATM 26 N N2 GDP . . . F 3 51.176 58.571 46.868 1 7.67 ? N2 GDP 800 B 1 HETATM 27 N N3 GDP . . . F 3 51.89 60.763 47.059 1 7.35 ? N3 GDP 800 B 1 HETATM 28 C C4 GDP . . . F 3 51.706 62.063 46.743 1 7.43 ? C4 GDP 800 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #