data_2I96 # _model_server_result.job_id 64veXrT33n1cScN4DQ1pcw _model_server_result.datetime_utc '2025-01-02 18:58:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2i96 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":129}' # _entry.id 2I96 # _exptl.entry_id 2I96 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 616.487 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PROTOPORPHYRIN IX CONTAINING FE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2I96 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2I96 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 44 A HIS 64 1_555 B FE HEM . A HEM 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc2 A NE2 HIS 68 A HIS 88 1_555 B FE HEM . A HEM 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.403 ? # _chem_comp.formula 'C34 H32 Fe N4 O4' _chem_comp.formula_weight 616.487 _chem_comp.id HEM _chem_comp.mon_nstd_flag . _chem_comp.name 'PROTOPORPHYRIN IX CONTAINING FE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEME # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A HEM sing 116 n n CHA C4D HEM doub 117 n n CHA HHA HEM sing 118 n n CHB C4A HEM sing 119 n n CHB C1B HEM doub 120 n n CHB HHB HEM sing 121 n n CHC C4B HEM sing 122 n n CHC C1C HEM doub 123 n n CHC HHC HEM sing 124 n n CHD C4C HEM doub 125 n n CHD C1D HEM sing 126 n n CHD HHD HEM sing 127 n n C1A C2A HEM doub 128 n y C1A NA HEM sing 129 n y C2A C3A HEM sing 130 n y C2A CAA HEM sing 131 n n C3A C4A HEM doub 132 n y C3A CMA HEM sing 133 n n C4A NA HEM sing 134 n y CMA HMA HEM sing 135 n n CMA HMAA HEM sing 136 n n CMA HMAB HEM sing 137 n n CAA CBA HEM sing 138 n n CAA HAA HEM sing 139 n n CAA HAAA HEM sing 140 n n CBA CGA HEM sing 141 n n CBA HBA HEM sing 142 n n CBA HBAA HEM sing 143 n n CGA O1A HEM doub 144 n n CGA O2A HEM sing 145 n n C1B C2B HEM sing 146 n n C1B NB HEM sing 147 n n C2B C3B HEM doub 148 n n C2B CMB HEM sing 149 n n C3B C4B HEM sing 150 n n C3B CAB HEM sing 151 n n C4B NB HEM doub 152 n n CMB HMB HEM sing 153 n n CMB HMBA HEM sing 154 n n CMB HMBB HEM sing 155 n n CAB CBB HEM doub 156 n n CAB HAB HEM sing 157 n n CBB HBB HEM sing 158 n n CBB HBBA HEM sing 159 n n C1C C2C HEM sing 160 n y C1C NC HEM sing 161 n y C2C C3C HEM doub 162 n y C2C CMC HEM sing 163 n n C3C C4C HEM sing 164 n y C3C CAC HEM sing 165 n n C4C NC HEM sing 166 n y CMC HMC HEM sing 167 n n CMC HMCA HEM sing 168 n n CMC HMCB HEM sing 169 n n CAC CBC HEM doub 170 n n CAC HAC HEM sing 171 n n CBC HBC HEM sing 172 n n CBC HBCA HEM sing 173 n n C1D C2D HEM sing 174 n n C1D ND HEM doub 175 n n C2D C3D HEM doub 176 n n C2D CMD HEM sing 177 n n C3D C4D HEM sing 178 n n C3D CAD HEM sing 179 n n C4D ND HEM sing 180 n n CMD HMD HEM sing 181 n n CMD HMDA HEM sing 182 n n CMD HMDB HEM sing 183 n n CAD CBD HEM sing 184 n n CAD HAD HEM sing 185 n n CAD HADA HEM sing 186 n n CBD CGD HEM sing 187 n n CBD HBD HEM sing 188 n n CBD HBDA HEM sing 189 n n CGD O1D HEM doub 190 n n CGD O2D HEM sing 191 n n O2A H2A HEM sing 192 n n O2D H2D HEM sing 193 n n FE NA HEM sing 194 n n FE NB HEM sing 195 n n FE NC HEM sing 196 n n FE ND HEM sing 197 n n # _atom_sites.entry_id 2I96 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id HEM _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 129 _pdbx_nonpoly_scheme.auth_seq_num 129 _pdbx_nonpoly_scheme.pdb_mon_id HEM _pdbx_nonpoly_scheme.auth_mon_id HEM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA HEM . . . B 2 -6.088 16.654 -5.75 1 0.5 ? CHA HEM 129 A 1 HETATM 2 C CHB HEM . . . B 2 -3.13 12.745 -5.789 1 0.41 ? CHB HEM 129 A 1 HETATM 3 C CHC HEM . . . B 2 -5.524 10.925 -1.928 1 0.38 ? CHC HEM 129 A 1 HETATM 4 C CHD HEM . . . B 2 -8.579 14.777 -1.944 1 0.47 ? CHD HEM 129 A 1 HETATM 5 C C1A HEM . . . B 2 -5.126 15.716 -6.114 1 0.46 ? C1A HEM 129 A 1 HETATM 6 C C2A HEM . . . B 2 -4.296 15.823 -7.289 1 0.49 ? C2A HEM 129 A 1 HETATM 7 C C3A HEM . . . B 2 -3.402 14.773 -7.257 1 0.47 ? C3A HEM 129 A 1 HETATM 8 C C4A HEM . . . B 2 -3.762 13.948 -6.126 1 0.42 ? C4A HEM 129 A 1 HETATM 9 C CMA HEM . . . B 2 -2.267 14.511 -8.219 1 0.54 ? CMA HEM 129 A 1 HETATM 10 C CAA HEM . . . B 2 -4.445 16.896 -8.347 1 0.58 ? CAA HEM 129 A 1 HETATM 11 C CBA HEM . . . B 2 -5.269 16.709 -9.628 1 0.94 ? CBA HEM 129 A 1 HETATM 12 C CGA HEM . . . B 2 -6.289 15.57 -9.61 1 1.22 ? CGA HEM 129 A 1 HETATM 13 O O1A HEM . . . B 2 -7.38 15.815 -9.048 1 2.03 ? O1A HEM 129 A 1 HETATM 14 O O2A HEM . . . B 2 -5.98 14.483 -10.15 1 1.18 ? O2A HEM 129 A 1 HETATM 15 C C1B HEM . . . B 2 -3.455 12.031 -4.646 1 0.37 ? C1B HEM 129 A 1 HETATM 16 C C2B HEM . . . B 2 -2.657 10.952 -4.127 1 0.37 ? C2B HEM 129 A 1 HETATM 17 C C3B HEM . . . B 2 -3.378 10.393 -3.103 1 0.35 ? C3B HEM 129 A 1 HETATM 18 C C4B HEM . . . B 2 -4.566 11.187 -2.894 1 0.35 ? C4B HEM 129 A 1 HETATM 19 C CMB HEM . . . B 2 -1.296 10.567 -4.634 1 0.43 ? CMB HEM 129 A 1 HETATM 20 C CAB HEM . . . B 2 -3.005 9.158 -2.307 1 0.38 ? CAB HEM 129 A 1 HETATM 21 C CBB HEM . . . B 2 -3.427 7.925 -2.651 1 0.52 ? CBB HEM 129 A 1 HETATM 22 C C1C HEM . . . B 2 -6.564 11.798 -1.631 1 0.4 ? C1C HEM 129 A 1 HETATM 23 C C2C HEM . . . B 2 -7.543 11.552 -0.604 1 0.49 ? C2C HEM 129 A 1 HETATM 24 C C3C HEM . . . B 2 -8.319 12.691 -0.531 1 0.47 ? C3C HEM 129 A 1 HETATM 25 C C4C HEM . . . B 2 -7.945 13.575 -1.61 1 0.43 ? C4C HEM 129 A 1 HETATM 26 C CMC HEM . . . B 2 -7.668 10.284 0.201 1 0.64 ? CMC HEM 129 A 1 HETATM 27 C CAC HEM . . . B 2 -9.409 12.987 0.491 1 0.55 ? CAC HEM 129 A 1 HETATM 28 C CBC HEM . . . B 2 -9.457 12.462 1.74 1 0.66 ? CBC HEM 129 A 1 HETATM 29 C C1D HEM . . . B 2 -8.141 15.611 -2.982 1 0.47 ? C1D HEM 129 A 1 HETATM 30 C C2D HEM . . . B 2 -8.749 16.877 -3.316 1 0.54 ? C2D HEM 129 A 1 HETATM 31 C C3D HEM . . . B 2 -8.056 17.397 -4.389 1 0.55 ? C3D HEM 129 A 1 HETATM 32 C C4D HEM . . . B 2 -7.006 16.466 -4.715 1 0.49 ? C4D HEM 129 A 1 HETATM 33 C CMD HEM . . . B 2 -9.923 17.494 -2.599 1 0.62 ? CMD HEM 129 A 1 HETATM 34 C CAD HEM . . . B 2 -8.318 18.696 -5.119 1 0.65 ? CAD HEM 129 A 1 HETATM 35 C CBD HEM . . . B 2 -8.255 20.088 -4.484 1 1.49 ? CBD HEM 129 A 1 HETATM 36 C CGD HEM . . . B 2 -9.599 20.558 -3.938 1 2.3 ? CGD HEM 129 A 1 HETATM 37 O O1D HEM . . . B 2 -9.66 20.812 -2.717 1 3.2 ? O1D HEM 129 A 1 HETATM 38 O O2D HEM . . . B 2 -10.547 20.655 -4.75 1 2.66 ? O2D HEM 129 A 1 HETATM 39 N NA HEM . . . B 2 -4.81 14.555 -5.488 1 0.41 ? NA HEM 129 A 1 HETATM 40 N NB HEM . . . B 2 -4.521 12.212 -3.804 1 0.36 ? NB HEM 129 A 1 HETATM 41 N NC HEM . . . B 2 -6.865 13 -2.223 1 0.39 ? NC HEM 129 A 1 HETATM 42 N ND HEM . . . B 2 -7.102 15.422 -3.849 1 0.44 ? ND HEM 129 A 1 HETATM 43 FE FE HEM . . . B 2 -5.833 13.818 -3.85 1 0.38 ? FE HEM 129 A 1 HETATM 44 H HHB HEM . . . B 2 -2.356 12.349 -6.439 1 0.45 ? HHB HEM 129 A 1 HETATM 45 H HHC HEM . . . B 2 -5.453 9.999 -1.382 1 0.42 ? HHC HEM 129 A 1 HETATM 46 H HHD HEM . . . B 2 -9.444 15.084 -1.383 1 0.51 ? HHD HEM 129 A 1 HETATM 47 H HAB HEM . . . B 2 -2.372 9.252 -1.436 1 0.5 ? HAB HEM 129 A 1 HETATM 48 H HAC HEM . . . B 2 -10.2 13.667 0.222 1 0.58 ? HAC HEM 129 A 1 HETATM 49 H HHA HEM . . . B 2 -6.127 17.576 -6.313 1 0.57 ? HHA HEM 129 A 1 HETATM 50 H HMA1 HEM . . . B 2 -2.198 15.287 -8.979 1 0.58 ? HMA1 HEM 129 A 1 HETATM 51 H HMA2 HEM . . . B 2 -1.33 14.487 -7.663 1 0.57 ? HMA2 HEM 129 A 1 HETATM 52 H HMA3 HEM . . . B 2 -2.398 13.557 -8.725 1 0.58 ? HMA3 HEM 129 A 1 HETATM 53 H HAA1 HEM . . . B 2 -3.845 17.796 -8.189 1 0.81 ? HAA1 HEM 129 A 1 HETATM 54 H HAA2 HEM . . . B 2 -3.596 16.509 -8.903 1 0.74 ? HAA2 HEM 129 A 1 HETATM 55 H HBA1 HEM . . . B 2 -4.564 16.514 -10.444 1 1.57 ? HBA1 HEM 129 A 1 HETATM 56 H HBA2 HEM . . . B 2 -5.816 17.621 -9.846 1 1.39 ? HBA2 HEM 129 A 1 HETATM 57 H HMB1 HEM . . . B 2 -0.413 11.003 -4.195 1 0.46 ? HMB1 HEM 129 A 1 HETATM 58 H HMB2 HEM . . . B 2 -1.21 9.81 -5.413 1 0.51 ? HMB2 HEM 129 A 1 HETATM 59 H HMB3 HEM . . . B 2 -1.203 9.775 -3.887 1 0.45 ? HMB3 HEM 129 A 1 HETATM 60 H HBB1 HEM . . . B 2 -4.063 7.793 -3.512 1 0.76 ? HBB1 HEM 129 A 1 HETATM 61 H HBB2 HEM . . . B 2 -3.119 7.071 -2.065 1 0.55 ? HBB2 HEM 129 A 1 HETATM 62 H HMC1 HEM . . . B 2 -7.125 9.474 -0.272 1 1.23 ? HMC1 HEM 129 A 1 HETATM 63 H HMC2 HEM . . . B 2 -7.259 10.44 1.201 1 1.02 ? HMC2 HEM 129 A 1 HETATM 64 H HMC3 HEM . . . B 2 -8.713 9.988 0.244 1 1.33 ? HMC3 HEM 129 A 1 HETATM 65 H HBC1 HEM . . . B 2 -10.28 12.72 2.391 1 0.74 ? HBC1 HEM 129 A 1 HETATM 66 H HBC2 HEM . . . B 2 -8.701 11.792 2.114 1 0.74 ? HBC2 HEM 129 A 1 HETATM 67 H HMD1 HEM . . . B 2 -10.295 17.047 -1.682 1 0.64 ? HMD1 HEM 129 A 1 HETATM 68 H HMD2 HEM . . . B 2 -10.339 18.453 -2.917 1 0.68 ? HMD2 HEM 129 A 1 HETATM 69 H HMD3 HEM . . . B 2 -9.206 18.055 -1.997 1 0.61 ? HMD3 HEM 129 A 1 HETATM 70 H HAD1 HEM . . . B 2 -8.667 18.622 -6.157 1 1.14 ? HAD1 HEM 129 A 1 HETATM 71 H HAD2 HEM . . . B 2 -9.36 18.631 -4.812 1 1.21 ? HAD2 HEM 129 A 1 HETATM 72 H HBD1 HEM . . . B 2 -7.922 20.803 -5.245 1 1.88 ? HBD1 HEM 129 A 1 HETATM 73 H HBD2 HEM . . . B 2 -7.518 20.078 -3.681 1 2.14 ? HBD2 HEM 129 A 1 # _model_server_stats.io_time_ms 80 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 6191 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 73 #