data_2IA9 # _model_server_result.job_id HFTjNdBaXPtFFVpMLGZb5Q _model_server_result.datetime_utc '2025-03-04 17:21:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ia9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":202}' # _entry.id 2IA9 # _exptl.entry_id 2IA9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IA9 _cell.length_a 136.464 _cell.length_b 136.464 _cell.length_c 110.493 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IA9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,O,P 1 1 C,D,M,Q,R 2 1 E,F,N,S,T 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 3 A ALA 0 1_555 A N MSE 4 A MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 4 A MSE 1 1_555 A N GLU 5 A GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale3 A C ARG 19 A ARG 16 1_555 A N MSE 20 A MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 A C MSE 20 A MSE 17 1_555 A N ARG 21 A ARG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale5 A C ALA 49 A ALA 46 1_555 A N MSE 50 A MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale6 A C MSE 50 A MSE 47 1_555 A N PRO 51 A PRO 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale7 B C ALA 3 B ALA 0 1_555 B N MSE 4 B MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 B C MSE 4 B MSE 1 1_555 B N GLU 5 B GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale9 B C ARG 19 B ARG 16 1_555 B N MSE 20 B MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale10 B C MSE 20 B MSE 17 1_555 B N ARG 21 B ARG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale11 B C ALA 49 B ALA 46 1_555 B N MSE 50 B MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale12 B C MSE 50 B MSE 47 1_555 B N PRO 51 B PRO 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale13 C C ALA 3 C ALA 0 1_555 C N MSE 4 C MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale14 C C MSE 4 C MSE 1 1_555 C N GLU 5 C GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale15 C C ARG 19 C ARG 16 1_555 C N MSE 20 C MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale16 C C MSE 20 C MSE 17 1_555 C N ARG 21 C ARG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 C C ALA 49 C ALA 46 1_555 C N MSE 50 C MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale18 C C MSE 50 C MSE 47 1_555 C N PRO 51 C PRO 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale19 D C ALA 3 D ALA 0 1_555 D N MSE 4 D MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale20 D C MSE 4 D MSE 1 1_555 D N GLU 5 D GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale21 D C ARG 19 D ARG 16 1_555 D N MSE 20 D MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale22 D C MSE 20 D MSE 17 1_555 D N ARG 21 D ARG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale23 D C ALA 49 D ALA 46 1_555 D N MSE 50 D MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale24 D C MSE 50 D MSE 47 1_555 D N PRO 51 D PRO 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale25 E C ALA 3 E ALA 0 1_555 E N MSE 4 E MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale26 E C MSE 4 E MSE 1 1_555 E N GLU 5 E GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale27 E C ARG 19 E ARG 16 1_555 E N MSE 20 E MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale28 E C MSE 20 E MSE 17 1_555 E N ARG 21 E ARG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale29 E C ALA 49 E ALA 46 1_555 E N MSE 50 E MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale30 E C MSE 50 E MSE 47 1_555 E N PRO 51 E PRO 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale31 F C ALA 3 F ALA 0 1_555 F N MSE 4 F MSE 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale32 F C MSE 4 F MSE 1 1_555 F N GLU 5 F GLU 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale33 F C ARG 19 F ARG 16 1_555 F N MSE 20 F MSE 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale34 F C MSE 20 F MSE 17 1_555 F N ARG 21 F ARG 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale35 F C ALA 49 F ALA 46 1_555 F N MSE 50 F MSE 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale36 F C MSE 50 F MSE 47 1_555 F N PRO 51 F PRO 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 243 n n C1 C2 PEG sing 244 n n C1 H11 PEG sing 245 n n C1 H12 PEG sing 246 n n O1 HO1 PEG sing 247 n n C2 O2 PEG sing 248 n n C2 H21 PEG sing 249 n n C2 H22 PEG sing 250 n n O2 C3 PEG sing 251 n n C3 C4 PEG sing 252 n n C3 H31 PEG sing 253 n n C3 H32 PEG sing 254 n n C4 O4 PEG sing 255 n n C4 H41 PEG sing 256 n n C4 H42 PEG sing 257 n n O4 HO4 PEG sing 258 n n # _atom_sites.entry_id 2IA9 _atom_sites.fract_transf_matrix[1][1] 0.007328 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007328 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 SO4 A 1 102 2 SO4 SO4 . H 3 PEG A 1 202 2 PEG PEG . I 3 PEG A 1 203 3 PEG PEG . J 3 PEG A 1 204 4 PEG PEG . K 3 PEG A 1 205 5 PEG PEG . L 2 SO4 B 1 103 3 SO4 SO4 . M 3 PEG D 1 201 1 PEG PEG . N 2 SO4 E 1 101 1 SO4 SO4 . O 4 HOH A 1 206 7 HOH HOH . O 4 HOH A 2 207 20 HOH HOH . O 4 HOH A 3 208 22 HOH HOH . O 4 HOH A 4 209 26 HOH HOH . O 4 HOH A 5 210 33 HOH HOH . O 4 HOH A 6 211 36 HOH HOH . O 4 HOH A 7 212 40 HOH HOH . O 4 HOH A 8 213 41 HOH HOH . O 4 HOH A 9 214 47 HOH HOH . O 4 HOH A 10 215 53 HOH HOH . O 4 HOH A 11 216 80 HOH HOH . O 4 HOH A 12 217 81 HOH HOH . O 4 HOH A 13 218 82 HOH HOH . O 4 HOH A 14 219 85 HOH HOH . O 4 HOH A 15 220 89 HOH HOH . P 4 HOH B 1 104 1 HOH HOH . P 4 HOH B 2 105 3 HOH HOH . P 4 HOH B 3 106 5 HOH HOH . P 4 HOH B 4 107 6 HOH HOH . P 4 HOH B 5 108 11 HOH HOH . P 4 HOH B 6 109 14 HOH HOH . P 4 HOH B 7 110 16 HOH HOH . P 4 HOH B 8 111 18 HOH HOH . P 4 HOH B 9 112 19 HOH HOH . P 4 HOH B 10 113 34 HOH HOH . P 4 HOH B 11 114 43 HOH HOH . P 4 HOH B 12 115 46 HOH HOH . P 4 HOH B 13 116 54 HOH HOH . P 4 HOH B 14 117 59 HOH HOH . P 4 HOH B 15 118 60 HOH HOH . P 4 HOH B 16 119 66 HOH HOH . P 4 HOH B 17 120 76 HOH HOH . P 4 HOH B 18 121 78 HOH HOH . P 4 HOH B 19 122 88 HOH HOH . P 4 HOH B 20 123 93 HOH HOH . P 4 HOH B 21 124 96 HOH HOH . Q 4 HOH C 1 98 8 HOH HOH . Q 4 HOH C 2 99 24 HOH HOH . Q 4 HOH C 3 100 51 HOH HOH . Q 4 HOH C 4 101 57 HOH HOH . Q 4 HOH C 5 102 58 HOH HOH . Q 4 HOH C 6 103 61 HOH HOH . Q 4 HOH C 7 104 63 HOH HOH . Q 4 HOH C 8 105 69 HOH HOH . Q 4 HOH C 9 106 71 HOH HOH . Q 4 HOH C 10 107 98 HOH HOH . R 4 HOH D 1 202 2 HOH HOH . R 4 HOH D 2 203 9 HOH HOH . R 4 HOH D 3 204 13 HOH HOH . R 4 HOH D 4 205 17 HOH HOH . R 4 HOH D 5 206 23 HOH HOH . R 4 HOH D 6 207 27 HOH HOH . R 4 HOH D 7 208 37 HOH HOH . R 4 HOH D 8 209 42 HOH HOH . R 4 HOH D 9 210 49 HOH HOH . R 4 HOH D 10 211 56 HOH HOH . R 4 HOH D 11 212 67 HOH HOH . R 4 HOH D 12 213 68 HOH HOH . R 4 HOH D 13 214 70 HOH HOH . R 4 HOH D 14 215 74 HOH HOH . R 4 HOH D 15 216 75 HOH HOH . R 4 HOH D 16 217 77 HOH HOH . R 4 HOH D 17 218 79 HOH HOH . R 4 HOH D 18 219 92 HOH HOH . R 4 HOH D 19 220 99 HOH HOH . S 4 HOH E 1 102 4 HOH HOH . S 4 HOH E 2 103 15 HOH HOH . S 4 HOH E 3 104 21 HOH HOH . S 4 HOH E 4 105 25 HOH HOH . S 4 HOH E 5 106 28 HOH HOH . S 4 HOH E 6 107 29 HOH HOH . S 4 HOH E 7 108 30 HOH HOH . S 4 HOH E 8 109 31 HOH HOH . S 4 HOH E 9 110 52 HOH HOH . S 4 HOH E 10 111 83 HOH HOH . S 4 HOH E 11 112 84 HOH HOH . S 4 HOH E 12 113 91 HOH HOH . S 4 HOH E 13 114 94 HOH HOH . S 4 HOH E 14 115 97 HOH HOH . T 4 HOH F 1 98 10 HOH HOH . T 4 HOH F 2 99 12 HOH HOH . T 4 HOH F 3 100 32 HOH HOH . T 4 HOH F 4 101 35 HOH HOH . T 4 HOH F 5 102 38 HOH HOH . T 4 HOH F 6 103 39 HOH HOH . T 4 HOH F 7 104 44 HOH HOH . T 4 HOH F 8 105 45 HOH HOH . T 4 HOH F 9 106 48 HOH HOH . T 4 HOH F 10 107 50 HOH HOH . T 4 HOH F 11 108 55 HOH HOH . T 4 HOH F 12 109 62 HOH HOH . T 4 HOH F 13 110 64 HOH HOH . T 4 HOH F 14 111 65 HOH HOH . T 4 HOH F 15 112 72 HOH HOH . T 4 HOH F 16 113 73 HOH HOH . T 4 HOH F 17 114 86 HOH HOH . T 4 HOH F 18 115 87 HOH HOH . T 4 HOH F 19 116 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . H 3 2.143 15.392 0.048 1 54.26 ? C1 PEG 202 A 1 HETATM 2 O O1 PEG . . . H 3 3.451 15.893 0.354 1 52.91 ? O1 PEG 202 A 1 HETATM 3 C C2 PEG . . . H 3 1.819 15.579 -1.441 1 54.24 ? C2 PEG 202 A 1 HETATM 4 O O2 PEG . . . H 3 0.506 15.094 -1.769 1 53.12 ? O2 PEG 202 A 1 HETATM 5 C C3 PEG . . . H 3 -0.474 16.135 -1.786 1 51.81 ? C3 PEG 202 A 1 HETATM 6 C C4 PEG . . . H 3 -1.513 15.9 -0.692 1 50.14 ? C4 PEG 202 A 1 HETATM 7 O O4 PEG . . . H 3 -2.581 15.13 -1.25 1 47.76 ? O4 PEG 202 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 19 _model_server_stats.element_count 7 #