data_2IE4 # _model_server_result.job_id bM1THWgr0tzesEr0G_qjCA _model_server_result.datetime_utc '2024-11-24 20:14:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ie4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 2IE4 # _exptl.entry_id 2IE4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IE4 _cell.length_a 92.54 _cell.length_b 194.85 _cell.length_c 201.35 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IE4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B OD2 ASP 57 C ASP 57 1_555 D MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? metalc ? metalc2 B NE2 HIS 59 C HIS 59 1_555 D MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 B OD2 ASP 85 C ASP 85 1_555 C MN MN . C MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc4 B OD2 ASP 85 C ASP 85 1_555 D MN MN . C MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.951 ? metalc ? metalc5 B OD1 ASN 117 C ASN 117 1_555 C MN MN . C MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc6 B NE2 HIS 167 C HIS 167 1_555 C MN MN . C MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc7 B ND1 HIS 241 C HIS 241 1_555 C MN MN . C MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.093 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2IE4 _atom_sites.fract_transf_matrix[1][1] 0.010806 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004966 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MN C 1 501 501 MN MN . D 3 MN C 1 502 502 MN MN . E 4 OKA C 1 401 401 OKA OKA . F 5 HOH A 1 590 5 HOH HOH . F 5 HOH A 2 591 10 HOH HOH . F 5 HOH A 3 592 11 HOH HOH . F 5 HOH A 4 593 13 HOH HOH . F 5 HOH A 5 594 15 HOH HOH . F 5 HOH A 6 595 25 HOH HOH . F 5 HOH A 7 596 27 HOH HOH . F 5 HOH A 8 597 30 HOH HOH . F 5 HOH A 9 598 31 HOH HOH . F 5 HOH A 10 599 34 HOH HOH . F 5 HOH A 11 600 35 HOH HOH . F 5 HOH A 12 601 36 HOH HOH . F 5 HOH A 13 602 38 HOH HOH . F 5 HOH A 14 603 40 HOH HOH . F 5 HOH A 15 604 41 HOH HOH . F 5 HOH A 16 605 44 HOH HOH . F 5 HOH A 17 606 46 HOH HOH . F 5 HOH A 18 607 47 HOH HOH . F 5 HOH A 19 608 49 HOH HOH . F 5 HOH A 20 609 51 HOH HOH . F 5 HOH A 21 610 52 HOH HOH . F 5 HOH A 22 611 55 HOH HOH . F 5 HOH A 23 612 58 HOH HOH . F 5 HOH A 24 613 62 HOH HOH . F 5 HOH A 25 614 63 HOH HOH . F 5 HOH A 26 615 67 HOH HOH . F 5 HOH A 27 616 72 HOH HOH . G 5 HOH C 1 503 1 HOH HOH . G 5 HOH C 2 504 2 HOH HOH . G 5 HOH C 3 505 3 HOH HOH . G 5 HOH C 4 506 4 HOH HOH . G 5 HOH C 5 507 6 HOH HOH . G 5 HOH C 6 508 7 HOH HOH . G 5 HOH C 7 509 9 HOH HOH . G 5 HOH C 8 510 12 HOH HOH . G 5 HOH C 9 511 14 HOH HOH . G 5 HOH C 10 512 16 HOH HOH . G 5 HOH C 11 513 17 HOH HOH . G 5 HOH C 12 514 18 HOH HOH . G 5 HOH C 13 515 20 HOH HOH . G 5 HOH C 14 516 21 HOH HOH . G 5 HOH C 15 517 22 HOH HOH . G 5 HOH C 16 518 23 HOH HOH . G 5 HOH C 17 519 24 HOH HOH . G 5 HOH C 18 520 26 HOH HOH . G 5 HOH C 19 521 28 HOH HOH . G 5 HOH C 20 522 29 HOH HOH . G 5 HOH C 21 523 33 HOH HOH . G 5 HOH C 22 524 42 HOH HOH . G 5 HOH C 23 525 43 HOH HOH . G 5 HOH C 24 526 50 HOH HOH . G 5 HOH C 25 527 53 HOH HOH . G 5 HOH C 26 528 54 HOH HOH . G 5 HOH C 27 529 56 HOH HOH . G 5 HOH C 28 530 57 HOH HOH . G 5 HOH C 29 531 59 HOH HOH . G 5 HOH C 30 532 64 HOH HOH . G 5 HOH C 31 533 65 HOH HOH . G 5 HOH C 32 534 68 HOH HOH . G 5 HOH C 33 535 69 HOH HOH . G 5 HOH C 34 536 70 HOH HOH . G 5 HOH C 35 537 71 HOH HOH . G 5 HOH C 36 538 73 HOH HOH . G 5 HOH C 37 539 74 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 40.04 _atom_site.Cartn_y -42.723 _atom_site.Cartn_z -41.707 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 39.53 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #