data_2IEO # _model_server_result.job_id nQvPk20RyAvzin8k5qhpvg _model_server_result.datetime_utc '2024-11-27 06:08:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ieo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":505}' # _entry.id 2IEO # _exptl.entry_id 2IEO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IEO _cell.length_a 58.318 _cell.length_b 86.216 _cell.length_c 45.85 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IEO _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 60 A ASP 60 1_555 D NA NA . A NA 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc2 D NA NA . A NA 505 1_555 H O HOH . A HOH 1015 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? metalc ? metalc3 D NA NA . A NA 505 1_555 H O HOH . A HOH 1040 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc4 D NA NA . A NA 505 1_555 H O HOH . A HOH 1089 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? metalc ? metalc5 D NA NA . A NA 505 1_555 H O HOH . A HOH 1112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc6 D NA NA . A NA 505 1_555 H O HOH . A HOH 1210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2IEO _atom_sites.fract_transf_matrix[1][1] 0.017147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011599 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.02181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 501 501 CL CL . D 3 NA A 1 505 505 NA NA . E 4 017 A 1 402 402 017 017 . F 2 CL B 1 502 502 CL CL . G 2 CL B 1 503 503 CL CL . H 5 HOH A 1 1004 1004 HOH HOH . H 5 HOH A 2 1006 1006 HOH HOH . H 5 HOH A 3 1008 1008 HOH HOH . H 5 HOH A 4 1011 1011 HOH HOH . H 5 HOH A 5 1014 1014 HOH HOH . H 5 HOH A 6 1015 1015 HOH HOH . H 5 HOH A 7 1017 1017 HOH HOH . H 5 HOH A 8 1028 1028 HOH HOH . H 5 HOH A 9 1029 1029 HOH HOH . H 5 HOH A 10 1032 1032 HOH HOH . H 5 HOH A 11 1033 1033 HOH HOH . H 5 HOH A 12 1034 1034 HOH HOH . H 5 HOH A 13 1037 1037 HOH HOH . H 5 HOH A 14 1038 1038 HOH HOH . H 5 HOH A 15 1039 1039 HOH HOH . H 5 HOH A 16 1040 1040 HOH HOH . H 5 HOH A 17 1042 1042 HOH HOH . H 5 HOH A 18 1043 1043 HOH HOH . H 5 HOH A 19 1044 1044 HOH HOH . H 5 HOH A 20 1045 1045 HOH HOH . H 5 HOH A 21 1046 1046 HOH HOH . H 5 HOH A 22 1049 1049 HOH HOH . H 5 HOH A 23 1050 1050 HOH HOH . H 5 HOH A 24 1051 1051 HOH HOH . H 5 HOH A 25 1053 1053 HOH HOH . H 5 HOH A 26 1060 1060 HOH HOH . H 5 HOH A 27 1067 1067 HOH HOH . H 5 HOH A 28 1072 1072 HOH HOH . H 5 HOH A 29 1078 1078 HOH HOH . H 5 HOH A 30 1080 1080 HOH HOH . H 5 HOH A 31 1081 1081 HOH HOH . H 5 HOH A 32 1084 1084 HOH HOH . H 5 HOH A 33 1085 1085 HOH HOH . H 5 HOH A 34 1087 1087 HOH HOH . H 5 HOH A 35 1088 1088 HOH HOH . H 5 HOH A 36 1089 1089 HOH HOH . H 5 HOH A 37 1090 1090 HOH HOH . H 5 HOH A 38 1094 1094 HOH HOH . H 5 HOH A 39 1095 1095 HOH HOH . H 5 HOH A 40 1098 1098 HOH HOH . H 5 HOH A 41 1103 1103 HOH HOH . H 5 HOH A 42 1104 1104 HOH HOH . H 5 HOH A 43 1108 1108 HOH HOH . H 5 HOH A 44 1111 1111 HOH HOH . H 5 HOH A 45 1112 1112 HOH HOH . H 5 HOH A 46 1113 1113 HOH HOH . H 5 HOH A 47 1114 1114 HOH HOH . H 5 HOH A 48 1115 1115 HOH HOH . H 5 HOH A 49 1120 1120 HOH HOH . H 5 HOH A 50 1121 1121 HOH HOH . H 5 HOH A 51 1122 1122 HOH HOH . H 5 HOH A 52 1126 1126 HOH HOH . H 5 HOH A 53 1127 1127 HOH HOH . H 5 HOH A 54 1128 1128 HOH HOH . H 5 HOH A 55 1132 1132 HOH HOH . H 5 HOH A 56 1133 1133 HOH HOH . H 5 HOH A 57 1134 1134 HOH HOH . H 5 HOH A 58 1137 1137 HOH HOH . H 5 HOH A 59 1138 1138 HOH HOH . H 5 HOH A 60 1142 1142 HOH HOH . H 5 HOH A 61 1143 1143 HOH HOH . H 5 HOH A 62 1144 1144 HOH HOH . H 5 HOH A 63 1151 1151 HOH HOH . H 5 HOH A 64 1152 1152 HOH HOH . H 5 HOH A 65 1154 1154 HOH HOH . H 5 HOH A 66 1159 1159 HOH HOH . H 5 HOH A 67 1160 1160 HOH HOH . H 5 HOH A 68 1164 1164 HOH HOH . H 5 HOH A 69 1165 1165 HOH HOH . H 5 HOH A 70 1170 1170 HOH HOH . H 5 HOH A 71 1173 1173 HOH HOH . H 5 HOH A 72 1179 1179 HOH HOH . H 5 HOH A 73 1181 1181 HOH HOH . H 5 HOH A 74 1182 1182 HOH HOH . H 5 HOH A 75 1183 1183 HOH HOH . H 5 HOH A 76 1185 1185 HOH HOH . H 5 HOH A 77 1188 1188 HOH HOH . H 5 HOH A 78 1192 1192 HOH HOH . H 5 HOH A 79 1194 1194 HOH HOH . H 5 HOH A 80 1197 1197 HOH HOH . H 5 HOH A 81 1198 1198 HOH HOH . H 5 HOH A 82 1202 1202 HOH HOH . H 5 HOH A 83 1204 1204 HOH HOH . H 5 HOH A 84 1205 1205 HOH HOH . H 5 HOH A 85 1208 1208 HOH HOH . H 5 HOH A 86 1209 1209 HOH HOH . H 5 HOH A 87 1210 1210 HOH HOH . H 5 HOH A 88 1212 1212 HOH HOH . H 5 HOH A 89 1213 1213 HOH HOH . H 5 HOH A 90 1214 1214 HOH HOH . H 5 HOH A 91 1226 1226 HOH HOH . H 5 HOH A 92 1228 1228 HOH HOH . H 5 HOH A 93 1230 1230 HOH HOH . H 5 HOH A 94 1238 1238 HOH HOH . H 5 HOH A 95 1240 1240 HOH HOH . H 5 HOH A 96 1248 1248 HOH HOH . H 5 HOH A 97 1249 1249 HOH HOH . H 5 HOH A 98 1255 1255 HOH HOH . H 5 HOH A 99 1256 1256 HOH HOH . H 5 HOH A 100 1258 1258 HOH HOH . H 5 HOH A 101 1259 1259 HOH HOH . H 5 HOH A 102 1263 1263 HOH HOH . H 5 HOH A 103 1267 1267 HOH HOH . H 5 HOH A 104 1271 1271 HOH HOH . H 5 HOH A 105 1272 1272 HOH HOH . H 5 HOH A 106 1277 1277 HOH HOH . H 5 HOH A 107 1290 1290 HOH HOH . H 5 HOH A 108 1291 1291 HOH HOH . H 5 HOH A 109 1297 1297 HOH HOH . H 5 HOH A 110 1298 1298 HOH HOH . H 5 HOH A 111 1299 1299 HOH HOH . H 5 HOH A 112 1301 1301 HOH HOH . H 5 HOH A 113 1304 1304 HOH HOH . H 5 HOH A 114 1305 1305 HOH HOH . H 5 HOH A 115 1313 1313 HOH HOH . H 5 HOH A 116 1318 1318 HOH HOH . H 5 HOH A 117 1319 1319 HOH HOH . H 5 HOH A 118 1322 1322 HOH HOH . H 5 HOH A 119 1325 1325 HOH HOH . H 5 HOH A 120 1327 1327 HOH HOH . H 5 HOH A 121 1328 1328 HOH HOH . H 5 HOH A 122 1332 1332 HOH HOH . H 5 HOH A 123 1336 1336 HOH HOH . H 5 HOH A 124 1337 1337 HOH HOH . H 5 HOH A 125 1342 1342 HOH HOH . H 5 HOH A 126 1351 1351 HOH HOH . H 5 HOH A 127 1352 1352 HOH HOH . H 5 HOH A 128 1355 1355 HOH HOH . H 5 HOH A 129 1357 1357 HOH HOH . I 5 HOH B 1 1005 1005 HOH HOH . I 5 HOH B 2 1007 1007 HOH HOH . I 5 HOH B 3 1009 1009 HOH HOH . I 5 HOH B 4 1010 1010 HOH HOH . I 5 HOH B 5 1012 1012 HOH HOH . I 5 HOH B 6 1013 1013 HOH HOH . I 5 HOH B 7 1016 1016 HOH HOH . I 5 HOH B 8 1018 1018 HOH HOH . I 5 HOH B 9 1019 1019 HOH HOH . I 5 HOH B 10 1020 1020 HOH HOH . I 5 HOH B 11 1021 1021 HOH HOH . I 5 HOH B 12 1022 1022 HOH HOH . I 5 HOH B 13 1023 1023 HOH HOH . I 5 HOH B 14 1024 1024 HOH HOH . I 5 HOH B 15 1025 1025 HOH HOH . I 5 HOH B 16 1026 1026 HOH HOH . I 5 HOH B 17 1027 1027 HOH HOH . I 5 HOH B 18 1030 1030 HOH HOH . I 5 HOH B 19 1031 1031 HOH HOH . I 5 HOH B 20 1035 1035 HOH HOH . I 5 HOH B 21 1036 1036 HOH HOH . I 5 HOH B 22 1041 1041 HOH HOH . I 5 HOH B 23 1047 1047 HOH HOH . I 5 HOH B 24 1048 1048 HOH HOH . I 5 HOH B 25 1052 1052 HOH HOH . I 5 HOH B 26 1054 1054 HOH HOH . I 5 HOH B 27 1055 1055 HOH HOH . I 5 HOH B 28 1056 1056 HOH HOH . I 5 HOH B 29 1057 1057 HOH HOH . I 5 HOH B 30 1058 1058 HOH HOH . I 5 HOH B 31 1059 1059 HOH HOH . I 5 HOH B 32 1063 1063 HOH HOH . I 5 HOH B 33 1064 1064 HOH HOH . I 5 HOH B 34 1065 1065 HOH HOH . I 5 HOH B 35 1066 1066 HOH HOH . I 5 HOH B 36 1068 1068 HOH HOH . I 5 HOH B 37 1069 1069 HOH HOH . I 5 HOH B 38 1070 1070 HOH HOH . I 5 HOH B 39 1071 1071 HOH HOH . I 5 HOH B 40 1073 1073 HOH HOH . I 5 HOH B 41 1074 1074 HOH HOH . I 5 HOH B 42 1075 1075 HOH HOH . I 5 HOH B 43 1076 1076 HOH HOH . I 5 HOH B 44 1077 1077 HOH HOH . I 5 HOH B 45 1079 1079 HOH HOH . I 5 HOH B 46 1082 1082 HOH HOH . I 5 HOH B 47 1083 1083 HOH HOH . I 5 HOH B 48 1086 1086 HOH HOH . I 5 HOH B 49 1091 1091 HOH HOH . I 5 HOH B 50 1092 1092 HOH HOH . I 5 HOH B 51 1093 1093 HOH HOH . I 5 HOH B 52 1096 1096 HOH HOH . I 5 HOH B 53 1097 1097 HOH HOH . I 5 HOH B 54 1099 1099 HOH HOH . I 5 HOH B 55 1100 1100 HOH HOH . I 5 HOH B 56 1102 1102 HOH HOH . I 5 HOH B 57 1105 1105 HOH HOH . I 5 HOH B 58 1106 1106 HOH HOH . I 5 HOH B 59 1107 1107 HOH HOH . I 5 HOH B 60 1109 1109 HOH HOH . I 5 HOH B 61 1110 1110 HOH HOH . I 5 HOH B 62 1117 1117 HOH HOH . I 5 HOH B 63 1118 1118 HOH HOH . I 5 HOH B 64 1119 1119 HOH HOH . I 5 HOH B 65 1123 1123 HOH HOH . I 5 HOH B 66 1124 1124 HOH HOH . I 5 HOH B 67 1125 1125 HOH HOH . I 5 HOH B 68 1129 1129 HOH HOH . I 5 HOH B 69 1130 1130 HOH HOH . I 5 HOH B 70 1131 1131 HOH HOH . I 5 HOH B 71 1135 1135 HOH HOH . I 5 HOH B 72 1139 1139 HOH HOH . I 5 HOH B 73 1141 1141 HOH HOH . I 5 HOH B 74 1145 1145 HOH HOH . I 5 HOH B 75 1146 1146 HOH HOH . I 5 HOH B 76 1148 1148 HOH HOH . I 5 HOH B 77 1149 1149 HOH HOH . I 5 HOH B 78 1155 1155 HOH HOH . I 5 HOH B 79 1156 1156 HOH HOH . I 5 HOH B 80 1157 1157 HOH HOH . I 5 HOH B 81 1162 1162 HOH HOH . I 5 HOH B 82 1168 1168 HOH HOH . I 5 HOH B 83 1176 1176 HOH HOH . I 5 HOH B 84 1180 1180 HOH HOH . I 5 HOH B 85 1184 1184 HOH HOH . I 5 HOH B 86 1186 1186 HOH HOH . I 5 HOH B 87 1191 1191 HOH HOH . I 5 HOH B 88 1195 1195 HOH HOH . I 5 HOH B 89 1196 1196 HOH HOH . I 5 HOH B 90 1199 1199 HOH HOH . I 5 HOH B 91 1201 1201 HOH HOH . I 5 HOH B 92 1203 1203 HOH HOH . I 5 HOH B 93 1215 1215 HOH HOH . I 5 HOH B 94 1216 1216 HOH HOH . I 5 HOH B 95 1218 1218 HOH HOH . I 5 HOH B 96 1223 1223 HOH HOH . I 5 HOH B 97 1224 1224 HOH HOH . I 5 HOH B 98 1227 1227 HOH HOH . I 5 HOH B 99 1229 1229 HOH HOH . I 5 HOH B 100 1231 1231 HOH HOH . I 5 HOH B 101 1232 1232 HOH HOH . I 5 HOH B 102 1233 1233 HOH HOH . I 5 HOH B 103 1234 1234 HOH HOH . I 5 HOH B 104 1244 1244 HOH HOH . I 5 HOH B 105 1250 1250 HOH HOH . I 5 HOH B 106 1252 1252 HOH HOH . I 5 HOH B 107 1253 1253 HOH HOH . I 5 HOH B 108 1257 1257 HOH HOH . I 5 HOH B 109 1269 1269 HOH HOH . I 5 HOH B 110 1273 1273 HOH HOH . I 5 HOH B 111 1276 1276 HOH HOH . I 5 HOH B 112 1278 1278 HOH HOH . I 5 HOH B 113 1280 1280 HOH HOH . I 5 HOH B 114 1283 1283 HOH HOH . I 5 HOH B 115 1289 1289 HOH HOH . I 5 HOH B 116 1296 1296 HOH HOH . I 5 HOH B 117 1300 1300 HOH HOH . I 5 HOH B 118 1302 1302 HOH HOH . I 5 HOH B 119 1306 1306 HOH HOH . I 5 HOH B 120 1307 1307 HOH HOH . I 5 HOH B 121 1308 1308 HOH HOH . I 5 HOH B 122 1311 1311 HOH HOH . I 5 HOH B 123 1312 1312 HOH HOH . I 5 HOH B 124 1315 1315 HOH HOH . I 5 HOH B 125 1316 1316 HOH HOH . I 5 HOH B 126 1320 1320 HOH HOH . I 5 HOH B 127 1321 1321 HOH HOH . I 5 HOH B 128 1326 1326 HOH HOH . I 5 HOH B 129 1330 1330 HOH HOH . I 5 HOH B 130 1338 1338 HOH HOH . I 5 HOH B 131 1339 1339 HOH HOH . I 5 HOH B 132 1341 1341 HOH HOH . I 5 HOH B 133 1344 1344 HOH HOH . I 5 HOH B 134 1345 1345 HOH HOH . I 5 HOH B 135 1350 1350 HOH HOH . I 5 HOH B 136 1353 1353 HOH HOH . I 5 HOH B 137 1354 1354 HOH HOH . I 5 HOH B 138 1356 1356 HOH HOH . I 5 HOH B 139 1359 1359 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 24.187 _atom_site.Cartn_y 39.979 _atom_site.Cartn_z 1.315 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.88 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 505 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #