data_2IER # _model_server_result.job_id IP3oaDGKZyEn_ahUC--3MA _model_server_result.datetime_utc '2024-12-01 04:09:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ier # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":604}' # _entry.id 2IER # _exptl.entry_id 2IER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2IER _cell.length_a 101.206 _cell.length_b 101.206 _cell.length_c 122.24 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IER _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N GLY 2 A GLY 2 1_555 E ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.336 ? metalc ? metalc2 A NE2 HIS 58 A HIS 58 1_555 D ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc3 A ND1 HIS 58 A HIS 58 1_555 G ZN ZN . A ZN 608 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc4 A OE2 GLU 73 A GLU 78 1_555 F ZN ZN . A ZN 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc5 A NE2 HIS 74 A HIS 79 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc6 A OE1 GLU 120 A GLU 126 1_555 E ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc7 A OE2 GLU 120 A GLU 126 1_555 E ZN ZN . A ZN 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc8 A NE2 HIS 188 A HIS 200 1_555 D ZN ZN . A ZN 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.421 ? metalc ? metalc9 A NE2 HIS 226 A HIS 238 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc10 A OD1 ASP 230 A ASP 242 1_555 C ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc11 A NE2 HIS 253 A HIS 265 1_555 F ZN ZN . A ZN 606 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc12 C ZN ZN . A ZN 601 1_555 Q O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc13 E ZN ZN . A ZN 605 1_555 B NE2 HIS 29 B HIS 29 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? metalc ? metalc14 E ZN ZN . A ZN 605 1_555 B OE1 GLU 90 B GLU 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc15 E ZN ZN . A ZN 605 1_555 B OE2 GLU 90 B GLU 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc16 F ZN ZN . A ZN 606 1_555 Q O HOH . A HOH 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc17 F ZN ZN . A ZN 606 1_555 Q O HOH . A HOH 830 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc18 G ZN ZN . A ZN 608 1_555 H O2B UDP . A UDP 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc19 B NE2 HIS 58 B HIS 58 1_555 L ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc20 B ND1 HIS 58 B HIS 58 1_555 N ZN ZN . B ZN 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc21 B OE2 GLU 73 B GLU 78 1_555 M ZN ZN . B ZN 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? metalc ? metalc22 B NE2 HIS 74 B HIS 79 1_555 K ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc23 B NE2 HIS 188 B HIS 200 1_555 L ZN ZN . B ZN 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc24 B NE2 HIS 226 B HIS 238 1_555 K ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc25 B OD1 ASP 230 B ASP 242 1_555 K ZN ZN . B ZN 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc26 B NE2 HIS 253 B HIS 265 1_555 M ZN ZN . B ZN 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc27 K ZN ZN . B ZN 602 1_555 R O HOH . B HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.885 ? metalc ? metalc28 M ZN ZN . B ZN 607 1_555 R O HOH . B HOH 808 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.787 ? metalc ? metalc29 N ZN ZN . B ZN 609 1_555 O O3A UDP . B UDP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? metalc ? metalc30 N ZN ZN . B ZN 609 1_555 O O2B UDP . B UDP 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2IER _atom_sites.fract_transf_matrix[1][1] 0.009881 _atom_sites.fract_transf_matrix[1][2] 0.005705 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008181 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 601 601 ZN ZN . D 2 ZN A 1 603 603 ZN ZN . E 2 ZN A 1 605 605 ZN ZN . F 2 ZN A 1 606 606 ZN ZN . G 2 ZN A 1 608 608 ZN ZN . H 3 UDP A 1 801 801 UDP UDP . I 4 PLM A 1 701 701 PLM PLM . J 5 GOL A 1 501 501 GOL GOL . K 2 ZN B 1 602 602 ZN ZN . L 2 ZN B 1 604 604 ZN ZN . M 2 ZN B 1 607 607 ZN ZN . N 2 ZN B 1 609 609 ZN ZN . O 3 UDP B 1 802 802 UDP UDP . P 4 PLM B 1 702 702 PLM PLM . Q 6 HOH A 1 802 1 HOH HOH . Q 6 HOH A 2 803 3 HOH HOH . Q 6 HOH A 3 804 4 HOH HOH . Q 6 HOH A 4 805 5 HOH HOH . Q 6 HOH A 5 806 6 HOH HOH . Q 6 HOH A 6 807 9 HOH HOH . Q 6 HOH A 7 808 11 HOH HOH . Q 6 HOH A 8 809 16 HOH HOH . Q 6 HOH A 9 810 17 HOH HOH . Q 6 HOH A 10 811 20 HOH HOH . Q 6 HOH A 11 812 21 HOH HOH . Q 6 HOH A 12 813 23 HOH HOH . Q 6 HOH A 13 814 24 HOH HOH . Q 6 HOH A 14 815 25 HOH HOH . Q 6 HOH A 15 816 26 HOH HOH . Q 6 HOH A 16 817 27 HOH HOH . Q 6 HOH A 17 818 31 HOH HOH . Q 6 HOH A 18 819 34 HOH HOH . Q 6 HOH A 19 820 36 HOH HOH . Q 6 HOH A 20 821 37 HOH HOH . Q 6 HOH A 21 822 38 HOH HOH . Q 6 HOH A 22 823 40 HOH HOH . Q 6 HOH A 23 824 41 HOH HOH . Q 6 HOH A 24 825 42 HOH HOH . Q 6 HOH A 25 826 43 HOH HOH . Q 6 HOH A 26 827 47 HOH HOH . Q 6 HOH A 27 828 49 HOH HOH . Q 6 HOH A 28 829 50 HOH HOH . Q 6 HOH A 29 830 53 HOH HOH . Q 6 HOH A 30 831 55 HOH HOH . Q 6 HOH A 31 832 61 HOH HOH . Q 6 HOH A 32 833 64 HOH HOH . Q 6 HOH A 33 834 67 HOH HOH . Q 6 HOH A 34 835 68 HOH HOH . Q 6 HOH A 35 836 70 HOH HOH . Q 6 HOH A 36 837 71 HOH HOH . Q 6 HOH A 37 838 73 HOH HOH . Q 6 HOH A 38 839 74 HOH HOH . Q 6 HOH A 39 840 75 HOH HOH . Q 6 HOH A 40 841 76 HOH HOH . Q 6 HOH A 41 842 77 HOH HOH . Q 6 HOH A 42 843 86 HOH HOH . R 6 HOH B 1 803 2 HOH HOH . R 6 HOH B 2 804 7 HOH HOH . R 6 HOH B 3 805 8 HOH HOH . R 6 HOH B 4 806 10 HOH HOH . R 6 HOH B 5 807 12 HOH HOH . R 6 HOH B 6 808 13 HOH HOH . R 6 HOH B 7 809 14 HOH HOH . R 6 HOH B 8 810 15 HOH HOH . R 6 HOH B 9 811 18 HOH HOH . R 6 HOH B 10 812 19 HOH HOH . R 6 HOH B 11 813 28 HOH HOH . R 6 HOH B 12 814 29 HOH HOH . R 6 HOH B 13 815 30 HOH HOH . R 6 HOH B 14 816 32 HOH HOH . R 6 HOH B 15 817 35 HOH HOH . R 6 HOH B 16 818 39 HOH HOH . R 6 HOH B 17 819 44 HOH HOH . R 6 HOH B 18 820 45 HOH HOH . R 6 HOH B 19 821 46 HOH HOH . R 6 HOH B 20 822 48 HOH HOH . R 6 HOH B 21 823 51 HOH HOH . R 6 HOH B 22 824 52 HOH HOH . R 6 HOH B 23 825 54 HOH HOH . R 6 HOH B 24 826 56 HOH HOH . R 6 HOH B 25 827 57 HOH HOH . R 6 HOH B 26 828 58 HOH HOH . R 6 HOH B 27 829 59 HOH HOH . R 6 HOH B 28 830 60 HOH HOH . R 6 HOH B 29 831 62 HOH HOH . R 6 HOH B 30 832 63 HOH HOH . R 6 HOH B 31 833 65 HOH HOH . R 6 HOH B 32 834 69 HOH HOH . R 6 HOH B 33 835 72 HOH HOH . R 6 HOH B 34 836 79 HOH HOH . R 6 HOH B 35 837 85 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 2 _atom_site.Cartn_x 39.945 _atom_site.Cartn_y 74.086 _atom_site.Cartn_z 6.482 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 39.15 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 604 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #