data_2IEZ # _model_server_result.job_id X-Tvvx9pDitwNzo4iddyDg _model_server_result.datetime_utc '2024-11-22 20:37:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2iez # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":301}' # _entry.id 2IEZ # _exptl.entry_id 2IEZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.45 _cell.angle_gamma 90 _cell.entry_id 2IEZ _cell.length_a 170.496 _cell.length_b 63.348 _cell.length_c 80.845 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IEZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 PISA,PQS dimeric 2 software_defined_assembly 5 PISA,PQS dimeric 2 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,N 2 1 C,I,J,O 3 1 D,K,L,P 4 1 A,B,E,F,G,H,M,N 5 1 C,D,I,J,K,L,O,P 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 125 A CYS 123 1_555 A SG CYS 190 A CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf2 B SG CYS 125 B CYS 123 1_555 B SG CYS 190 B CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? disulf ? disulf3 C SG CYS 125 H CYS 123 1_555 C SG CYS 190 H CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf4 D SG CYS 125 I CYS 123 1_555 D SG CYS 190 I CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 A OG1 THR 25 A THR 23 1_555 E CA CA . A CA 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.485 ? metalc ? metalc2 E CA CA . A CA 219 1_555 F O1B GDP . A GDP 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? metalc ? metalc3 E CA CA . A CA 219 1_555 F O3B GDP . A GDP 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc4 E CA CA . A CA 219 1_555 F O2A GDP . A GDP 2001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc5 B OG1 THR 25 B THR 23 1_555 G CA CA . B CA 219 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? metalc ? metalc6 G CA CA . B CA 219 1_555 H O3B GDP . B GDP 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc7 G CA CA . B CA 219 1_555 H O1B GDP . B GDP 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.869 ? metalc ? metalc8 G CA CA . B CA 219 1_555 H O2A GDP . B GDP 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc9 C OG1 THR 25 H THR 23 1_555 I CA CA . H CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc10 I CA CA . H CA 401 1_555 J O1B GDP . H GDP 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc11 I CA CA . H CA 401 1_555 J O2B GDP . H GDP 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.668 ? metalc ? metalc12 I CA CA . H CA 401 1_555 J O2A GDP . H GDP 4001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.685 ? metalc ? metalc13 D OG1 THR 25 I THR 23 1_555 K CA CA . I CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.912 ? metalc ? metalc14 K CA CA . I CA 301 1_555 L O3B GDP . I GDP 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc15 K CA CA . I CA 301 1_555 L O1B GDP . I GDP 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2IEZ _atom_sites.fract_transf_matrix[1][1] 0.005865 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000871 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015786 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012505 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CA A 1 219 201 CA CA . F 3 GDP A 1 2001 2001 GDP GDP . G 2 CA B 1 219 101 CA CA . H 3 GDP B 1 1001 1001 GDP GDP . I 2 CA H 1 401 401 CA CA . J 3 GDP H 1 4001 4001 GDP GDP . K 2 CA I 1 301 301 CA CA . L 3 GDP I 1 3001 3001 GDP GDP . M 4 HOH A 1 2002 1 HOH HOH . M 4 HOH A 2 2003 11 HOH HOH . M 4 HOH A 3 2004 12 HOH HOH . M 4 HOH A 4 2005 13 HOH HOH . M 4 HOH A 5 2006 14 HOH HOH . M 4 HOH A 6 2007 15 HOH HOH . M 4 HOH A 7 2008 16 HOH HOH . M 4 HOH A 8 2009 18 HOH HOH . M 4 HOH A 9 2010 19 HOH HOH . M 4 HOH A 10 2011 20 HOH HOH . M 4 HOH A 11 2012 23 HOH HOH . M 4 HOH A 12 2013 36 HOH HOH . M 4 HOH A 13 2014 37 HOH HOH . M 4 HOH A 14 2015 38 HOH HOH . N 4 HOH B 1 1002 2 HOH HOH . N 4 HOH B 2 1003 3 HOH HOH . N 4 HOH B 3 1004 4 HOH HOH . N 4 HOH B 4 1005 17 HOH HOH . N 4 HOH B 5 1006 25 HOH HOH . N 4 HOH B 6 1007 26 HOH HOH . N 4 HOH B 7 1008 27 HOH HOH . N 4 HOH B 8 1009 28 HOH HOH . N 4 HOH B 9 1010 29 HOH HOH . N 4 HOH B 10 1011 31 HOH HOH . O 4 HOH H 1 4002 5 HOH HOH . O 4 HOH H 2 4003 6 HOH HOH . O 4 HOH H 3 4004 10 HOH HOH . O 4 HOH H 4 4005 21 HOH HOH . O 4 HOH H 5 4006 30 HOH HOH . O 4 HOH H 6 4007 32 HOH HOH . O 4 HOH H 7 4008 33 HOH HOH . O 4 HOH H 8 4009 34 HOH HOH . O 4 HOH H 9 4010 35 HOH HOH . P 4 HOH I 1 3002 7 HOH HOH . P 4 HOH I 2 3003 8 HOH HOH . P 4 HOH I 3 3004 9 HOH HOH . P 4 HOH I 4 3005 22 HOH HOH . P 4 HOH I 5 3006 24 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 2 _atom_site.Cartn_x -23.084 _atom_site.Cartn_y -37.55 _atom_site.Cartn_z -1.864 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 52.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id I _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #