data_2IIC # _model_server_result.job_id eqYPT5xwjJb9ijI-FPaVUw _model_server_result.datetime_utc '2024-12-06 08:51:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2iic # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":402}' # _entry.id 2IIC # _exptl.entry_id 2IIC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.39 _cell.angle_gamma 90 _cell.entry_id 2IIC _cell.length_a 129.3 _cell.length_b 45.285 _cell.length_c 131.901 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IIC _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LYS 57 A LYS 53 1_555 E CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.884 ? metalc ? metalc2 A O ILE 60 A ILE 56 1_555 E CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.337 ? metalc ? metalc3 A O LYS 61 A LYS 57 1_555 E CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.017 ? metalc ? metalc4 A OE2 GLU 66 A GLU 62 1_555 E CA CA . A CA 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.777 ? metalc ? metalc5 E CA CA . A CA 401 1_555 I O HOH . A HOH 428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc6 B O LYS 57 B LYS 53 1_555 F CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc7 B O ILE 60 B ILE 56 1_555 F CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.933 ? metalc ? metalc8 B O LYS 61 B LYS 57 1_555 F CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.177 ? metalc ? metalc9 B OD1 ASN 62 B ASN 58 1_555 F CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.043 ? metalc ? metalc10 B OE2 GLU 66 B GLU 62 1_555 F CA CA . B CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc11 B O ASP 130 B ASP 126 1_555 G CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.049 ? metalc ? metalc12 F CA CA . B CA 402 1_555 J O HOH . B HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.945 ? metalc ? metalc13 C O LYS 57 C LYS 53 1_555 G CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.753 ? metalc ? metalc14 C O ILE 60 C ILE 56 1_555 G CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? metalc ? metalc15 C O LYS 61 C LYS 57 1_555 G CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.004 ? metalc ? metalc16 C OD1 ASN 62 C ASN 58 1_555 G CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.98 ? metalc ? metalc17 C OE2 GLU 66 C GLU 62 1_555 G CA CA . C CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc18 G CA CA . C CA 403 1_555 K O HOH . C HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.034 ? metalc ? metalc19 D O LYS 57 D LYS 53 1_555 H CA CA . D CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? metalc ? metalc20 D O ILE 60 D ILE 56 1_555 H CA CA . D CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.158 ? metalc ? metalc21 D O LYS 61 D LYS 57 1_555 H CA CA . D CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.194 ? metalc ? metalc22 D OD1 ASN 62 D ASN 58 1_555 H CA CA . D CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.781 ? metalc ? metalc23 D OE2 GLU 66 D GLU 62 1_555 H CA CA . D CA 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.573 ? metalc ? metalc24 H CA CA . D CA 404 1_555 L O HOH . D HOH 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.998 ? metalc ? metalc25 H CA CA . D CA 404 1_555 L O HOH . D HOH 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2IIC _atom_sites.fract_transf_matrix[1][1] 0.007734 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003837 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022082 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008463 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CA A 1 401 301 CA CA . F 2 CA B 1 402 302 CA CA . G 2 CA C 1 403 303 CA CA . H 2 CA D 1 404 304 CA CA . I 3 HOH A 1 402 4 HOH HOH . I 3 HOH A 2 403 6 HOH HOH . I 3 HOH A 3 404 8 HOH HOH . I 3 HOH A 4 405 16 HOH HOH . I 3 HOH A 5 406 21 HOH HOH . I 3 HOH A 6 407 22 HOH HOH . I 3 HOH A 7 408 24 HOH HOH . I 3 HOH A 8 409 30 HOH HOH . I 3 HOH A 9 410 31 HOH HOH . I 3 HOH A 10 411 39 HOH HOH . I 3 HOH A 11 412 44 HOH HOH . I 3 HOH A 12 413 47 HOH HOH . I 3 HOH A 13 414 50 HOH HOH . I 3 HOH A 14 415 54 HOH HOH . I 3 HOH A 15 416 55 HOH HOH . I 3 HOH A 16 417 60 HOH HOH . I 3 HOH A 17 418 62 HOH HOH . I 3 HOH A 18 419 64 HOH HOH . I 3 HOH A 19 420 65 HOH HOH . I 3 HOH A 20 421 69 HOH HOH . I 3 HOH A 21 422 74 HOH HOH . I 3 HOH A 22 423 76 HOH HOH . I 3 HOH A 23 424 78 HOH HOH . I 3 HOH A 24 425 80 HOH HOH . I 3 HOH A 25 426 81 HOH HOH . I 3 HOH A 26 427 82 HOH HOH . I 3 HOH A 27 428 83 HOH HOH . I 3 HOH A 28 429 84 HOH HOH . I 3 HOH A 29 430 85 HOH HOH . I 3 HOH A 30 431 86 HOH HOH . I 3 HOH A 31 432 100 HOH HOH . I 3 HOH A 32 433 101 HOH HOH . I 3 HOH A 33 434 103 HOH HOH . I 3 HOH A 34 435 105 HOH HOH . I 3 HOH A 35 436 107 HOH HOH . I 3 HOH A 36 437 108 HOH HOH . I 3 HOH A 37 438 110 HOH HOH . I 3 HOH A 38 439 111 HOH HOH . J 3 HOH B 1 403 2 HOH HOH . J 3 HOH B 2 404 12 HOH HOH . J 3 HOH B 3 405 15 HOH HOH . J 3 HOH B 4 406 20 HOH HOH . J 3 HOH B 5 407 23 HOH HOH . J 3 HOH B 6 408 27 HOH HOH . J 3 HOH B 7 409 29 HOH HOH . J 3 HOH B 8 410 35 HOH HOH . J 3 HOH B 9 411 42 HOH HOH . J 3 HOH B 10 412 46 HOH HOH . J 3 HOH B 11 413 53 HOH HOH . J 3 HOH B 12 414 57 HOH HOH . J 3 HOH B 13 415 66 HOH HOH . J 3 HOH B 14 416 67 HOH HOH . J 3 HOH B 15 417 72 HOH HOH . J 3 HOH B 16 418 79 HOH HOH . J 3 HOH B 17 419 87 HOH HOH . J 3 HOH B 18 420 88 HOH HOH . J 3 HOH B 19 421 89 HOH HOH . J 3 HOH B 20 422 90 HOH HOH . J 3 HOH B 21 423 91 HOH HOH . J 3 HOH B 22 424 93 HOH HOH . J 3 HOH B 23 425 95 HOH HOH . J 3 HOH B 24 426 104 HOH HOH . J 3 HOH B 25 427 106 HOH HOH . K 3 HOH C 1 404 3 HOH HOH . K 3 HOH C 2 405 7 HOH HOH . K 3 HOH C 3 406 10 HOH HOH . K 3 HOH C 4 407 11 HOH HOH . K 3 HOH C 5 408 13 HOH HOH . K 3 HOH C 6 409 14 HOH HOH . K 3 HOH C 7 410 17 HOH HOH . K 3 HOH C 8 411 19 HOH HOH . K 3 HOH C 9 412 25 HOH HOH . K 3 HOH C 10 413 28 HOH HOH . K 3 HOH C 11 414 32 HOH HOH . K 3 HOH C 12 415 34 HOH HOH . K 3 HOH C 13 416 41 HOH HOH . K 3 HOH C 14 417 43 HOH HOH . K 3 HOH C 15 418 52 HOH HOH . K 3 HOH C 16 419 58 HOH HOH . K 3 HOH C 17 420 68 HOH HOH . K 3 HOH C 18 421 70 HOH HOH . K 3 HOH C 19 422 71 HOH HOH . K 3 HOH C 20 423 92 HOH HOH . K 3 HOH C 21 424 94 HOH HOH . K 3 HOH C 22 425 99 HOH HOH . K 3 HOH C 23 426 102 HOH HOH . L 3 HOH D 1 405 1 HOH HOH . L 3 HOH D 2 406 5 HOH HOH . L 3 HOH D 3 407 9 HOH HOH . L 3 HOH D 4 408 18 HOH HOH . L 3 HOH D 5 409 26 HOH HOH . L 3 HOH D 6 410 33 HOH HOH . L 3 HOH D 7 411 36 HOH HOH . L 3 HOH D 8 412 37 HOH HOH . L 3 HOH D 9 413 38 HOH HOH . L 3 HOH D 10 414 40 HOH HOH . L 3 HOH D 11 415 45 HOH HOH . L 3 HOH D 12 416 48 HOH HOH . L 3 HOH D 13 417 49 HOH HOH . L 3 HOH D 14 418 51 HOH HOH . L 3 HOH D 15 419 56 HOH HOH . L 3 HOH D 16 420 59 HOH HOH . L 3 HOH D 17 421 61 HOH HOH . L 3 HOH D 18 422 63 HOH HOH . L 3 HOH D 19 423 73 HOH HOH . L 3 HOH D 20 424 75 HOH HOH . L 3 HOH D 21 425 77 HOH HOH . L 3 HOH D 22 426 96 HOH HOH . L 3 HOH D 23 427 97 HOH HOH . L 3 HOH D 24 428 98 HOH HOH . L 3 HOH D 25 429 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -20.626 _atom_site.Cartn_y 1.814 _atom_site.Cartn_z -35.872 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.86 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 402 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 34 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #