data_2IL4 # _model_server_result.job_id 4A5zH9KbD8iJpCNRNqhnyw _model_server_result.datetime_utc '2024-11-05 06:57:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2il4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":104}' # _entry.id 2IL4 # _exptl.entry_id 2IL4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.86 _cell.angle_gamma 90 _cell.entry_id 2IL4 _cell.length_a 27.905 _cell.length_b 63.941 _cell.length_c 29.525 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IL4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 2IL4 _atom_sites.fract_transf_matrix[1][1] 0.035836 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000537 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015639 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.033873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 104 101 COA COA . C 3 HOH A 1 105 1 HOH HOH . C 3 HOH A 2 106 2 HOH HOH . C 3 HOH A 3 107 3 HOH HOH . C 3 HOH A 4 108 4 HOH HOH . C 3 HOH A 5 109 5 HOH HOH . C 3 HOH A 6 110 6 HOH HOH . C 3 HOH A 7 111 7 HOH HOH . C 3 HOH A 8 112 8 HOH HOH . C 3 HOH A 9 113 9 HOH HOH . C 3 HOH A 10 114 10 HOH HOH . C 3 HOH A 11 115 11 HOH HOH . C 3 HOH A 12 116 12 HOH HOH . C 3 HOH A 13 117 13 HOH HOH . C 3 HOH A 14 118 14 HOH HOH . C 3 HOH A 15 119 15 HOH HOH . C 3 HOH A 16 120 16 HOH HOH . C 3 HOH A 17 121 17 HOH HOH . C 3 HOH A 18 122 18 HOH HOH . C 3 HOH A 19 123 19 HOH HOH . C 3 HOH A 20 124 20 HOH HOH . C 3 HOH A 21 125 21 HOH HOH . C 3 HOH A 22 126 22 HOH HOH . C 3 HOH A 23 127 23 HOH HOH . C 3 HOH A 24 128 24 HOH HOH . C 3 HOH A 25 129 25 HOH HOH . C 3 HOH A 26 130 26 HOH HOH . C 3 HOH A 27 131 27 HOH HOH . C 3 HOH A 28 132 28 HOH HOH . C 3 HOH A 29 133 29 HOH HOH . C 3 HOH A 30 134 30 HOH HOH . C 3 HOH A 31 135 31 HOH HOH . C 3 HOH A 32 136 32 HOH HOH . C 3 HOH A 33 137 33 HOH HOH . C 3 HOH A 34 138 34 HOH HOH . C 3 HOH A 35 139 35 HOH HOH . C 3 HOH A 36 140 36 HOH HOH . C 3 HOH A 37 141 37 HOH HOH . C 3 HOH A 38 142 38 HOH HOH . C 3 HOH A 39 143 39 HOH HOH . C 3 HOH A 40 144 40 HOH HOH . C 3 HOH A 41 145 41 HOH HOH . C 3 HOH A 42 146 42 HOH HOH . C 3 HOH A 43 147 43 HOH HOH . C 3 HOH A 44 148 44 HOH HOH . C 3 HOH A 45 149 45 HOH HOH . C 3 HOH A 46 150 46 HOH HOH . C 3 HOH A 47 151 47 HOH HOH . C 3 HOH A 48 152 48 HOH HOH . C 3 HOH A 49 153 49 HOH HOH . C 3 HOH A 50 154 50 HOH HOH . C 3 HOH A 51 155 51 HOH HOH . C 3 HOH A 52 156 52 HOH HOH . C 3 HOH A 53 157 53 HOH HOH . C 3 HOH A 54 158 54 HOH HOH . C 3 HOH A 55 159 55 HOH HOH . C 3 HOH A 56 160 56 HOH HOH . C 3 HOH A 57 161 57 HOH HOH . C 3 HOH A 58 162 58 HOH HOH . C 3 HOH A 59 163 59 HOH HOH . C 3 HOH A 60 164 60 HOH HOH . C 3 HOH A 61 165 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . B 2 -6.846 0.822 -6.577 1 48.11 ? N1A COA 104 A 1 HETATM 2 C C2A COA . . . B 2 -5.644 1.405 -7.231 1 46.48 ? C2A COA 104 A 1 HETATM 3 N N3A COA . . . B 2 -5.59 2.854 -6.976 1 40.67 ? N3A COA 104 A 1 HETATM 4 C C4A COA . . . B 2 -6.689 3.592 -6.54 1 43.21 ? C4A COA 104 A 1 HETATM 5 C C5A COA . . . B 2 -7.843 2.984 -6.068 1 43.73 ? C5A COA 104 A 1 HETATM 6 C C6A COA . . . B 2 -7.901 1.605 -6.023 1 46.27 ? C6A COA 104 A 1 HETATM 7 N N6A COA . . . B 2 -8.959 1.011 -5.456 1 45.23 ? N6A COA 104 A 1 HETATM 8 N N7A COA . . . B 2 -8.699 3.961 -5.733 1 48.56 ? N7A COA 104 A 1 HETATM 9 C C8A COA . . . B 2 -8.101 5.142 -5.973 1 44.81 ? C8A COA 104 A 1 HETATM 10 N N9A COA . . . B 2 -6.879 4.909 -6.473 1 42.71 ? N9A COA 104 A 1 HETATM 11 C C1B COA . . . B 2 -5.848 5.88 -6.898 1 43.74 ? C1B COA 104 A 1 HETATM 12 C C2B COA . . . B 2 -6.361 6.844 -7.98 1 51.95 ? C2B COA 104 A 1 HETATM 13 O O2B COA . . . B 2 -5.602 6.644 -9.206 1 49.07 ? O2B COA 104 A 1 HETATM 14 C C3B COA . . . B 2 -6.044 8.215 -7.362 1 51.79 ? C3B COA 104 A 1 HETATM 15 O O3B COA . . . B 2 -5.351 8.985 -8.337 1 61.16 ? O3B COA 104 A 1 HETATM 16 P P3B COA . . . B 2 -5.853 10.415 -8.851 1 72.88 ? P3B COA 104 A 1 HETATM 17 O O7A COA . . . B 2 -4.814 11.462 -8.09 1 67.29 ? O7A COA 104 A 1 HETATM 18 O O8A COA . . . B 2 -7.383 10.564 -8.258 1 67.71 ? O8A COA 104 A 1 HETATM 19 O O9A COA . . . B 2 -5.723 10.487 -10.339 1 70.72 ? O9A COA 104 A 1 HETATM 20 C C4B COA . . . B 2 -5.056 7.852 -6.238 1 39.72 ? C4B COA 104 A 1 HETATM 21 O O4B COA . . . B 2 -5.593 6.658 -5.755 1 38.7 ? O4B COA 104 A 1 HETATM 22 C C5B COA . . . B 2 -5.128 8.778 -5.051 1 36.68 ? C5B COA 104 A 1 HETATM 23 O O5B COA . . . B 2 -3.887 8.687 -4.352 1 30.79 ? O5B COA 104 A 1 HETATM 24 P P1A COA . . . B 2 -3.783 9.041 -2.807 1 31 ? P1A COA 104 A 1 HETATM 25 O O1A COA . . . B 2 -4.338 10.387 -2.61 1 29.62 ? O1A COA 104 A 1 HETATM 26 O O2A COA . . . B 2 -2.419 8.665 -2.336 1 26.47 ? O2A COA 104 A 1 HETATM 27 O O3A COA . . . B 2 -4.826 7.976 -2.134 1 24.51 ? O3A COA 104 A 1 HETATM 28 P P2A COA . . . B 2 -5.957 8.3 -1.014 1 24.92 ? P2A COA 104 A 1 HETATM 29 O O4A COA . . . B 2 -5.348 8.889 0.251 1 19.73 ? O4A COA 104 A 1 HETATM 30 O O5A COA . . . B 2 -7.114 8.949 -1.627 1 27.44 ? O5A COA 104 A 1 HETATM 31 O O6A COA . . . B 2 -6.382 6.877 -0.651 1 23.15 ? O6A COA 104 A 1 HETATM 32 C CBP COA . . . B 2 -7.346 4.709 -1.071 1 31.56 ? CBP COA 104 A 1 HETATM 33 C CCP COA . . . B 2 -6.503 5.849 -1.66 1 28.06 ? CCP COA 104 A 1 HETATM 34 C CDP COA . . . B 2 -7.56 3.652 -2.151 1 29.68 ? CDP COA 104 A 1 HETATM 35 C CEP COA . . . B 2 -6.617 4.116 0.128 1 30.89 ? CEP COA 104 A 1 HETATM 36 C CAP COA . . . B 2 -8.714 5.288 -0.588 1 35.21 ? CAP COA 104 A 1 HETATM 37 O OAP COA . . . B 2 -9.421 5.899 -1.684 1 33.95 ? OAP COA 104 A 1 HETATM 38 C C9P COA . . . B 2 -9.614 4.184 0.021 1 32.89 ? C9P COA 104 A 1 HETATM 39 O O9P COA . . . B 2 -9.584 4.006 1.331 1 34.98 ? O9P COA 104 A 1 HETATM 40 N N8P COA . . . B 2 -10.362 3.454 -0.778 1 39.68 ? N8P COA 104 A 1 HETATM 41 C C7P COA . A . B 2 -11.224 2.347 -0.267 0.5 40.39 ? C7P COA 104 A 1 HETATM 42 C C7P COA . B . B 2 -11.279 2.418 -0.291 0.5 40.13 ? C7P COA 104 A 1 HETATM 43 C C6P COA . A . B 2 -10.392 1.079 0.111 0.5 37.1 ? C6P COA 104 A 1 HETATM 44 C C6P COA . B . B 2 -12.632 3.129 -0.233 0.5 37.23 ? C6P COA 104 A 1 HETATM 45 C C5P COA . A . B 2 -9.674 0.435 -1.086 0.5 38.49 ? C5P COA 104 A 1 HETATM 46 C C5P COA . B . B 2 -13.23 3.395 -1.625 0.5 34.46 ? C5P COA 104 A 1 HETATM 47 O O5P COA . A . B 2 -10.407 0.171 -2.205 0.5 35.16 ? O5P COA 104 A 1 HETATM 48 O O5P COA . B . B 2 -13.062 2.48 -2.609 0.5 33.87 ? O5P COA 104 A 1 HETATM 49 N N4P COA . A . B 2 -8.367 0.163 -0.979 0.5 31.19 ? N4P COA 104 A 1 HETATM 50 N N4P COA . B . B 2 -13.933 4.504 -1.807 0.5 39.93 ? N4P COA 104 A 1 HETATM 51 C C3P COA . A . B 2 -7.618 -0.431 -2.113 0.5 36.41 ? C3P COA 104 A 1 HETATM 52 C C3P COA . B . B 2 -14.568 4.793 -3.098 0.5 38.4 ? C3P COA 104 A 1 HETATM 53 C C2P COA . A . B 2 -7.5 -1.944 -1.992 0.5 34.66 ? C2P COA 104 A 1 HETATM 54 C C2P COA . B . B 2 -15.119 6.201 -3.062 0.5 42.78 ? C2P COA 104 A 1 HETATM 55 S S1P COA . A . B 2 -6.661 -2.401 -0.438 0.5 30.18 ? S1P COA 104 A 1 HETATM 56 S S1P COA . B . B 2 -13.716 7.356 -2.904 0.5 57.88 ? S1P COA 104 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 56 #