data_2IMB # _model_server_result.job_id WtqrX6b0RSFik9mybef3vg _model_server_result.datetime_utc '2024-12-27 11:59:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2imb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 2IMB # _exptl.entry_id 2IMB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.1 _cell.angle_gamma 90 _cell.entry_id 2IMB _cell.length_a 74.238 _cell.length_b 67.928 _cell.length_c 98.305 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IMB _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 243 A HIS 223 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc2 A NE2 HIS 247 A HIS 227 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? metalc ? metalc3 A OE1 GLU 282 A GLU 262 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc4 A OE2 GLU 282 A GLU 262 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? metalc ? metalc5 C ZN ZN . A ZN 500 1_555 D O1 AHL . A AHL 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.762 ? metalc ? metalc6 C ZN ZN . A ZN 500 1_555 D O2 AHL . A AHL 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc7 B NE2 HIS 243 B HIS 223 1_555 E ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.12 ? metalc ? metalc8 B NE2 HIS 247 B HIS 227 1_555 E ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? metalc ? metalc9 B OE2 GLU 282 B GLU 262 1_555 E ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc10 B OE1 GLU 282 B GLU 262 1_555 E ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc11 E ZN ZN . B ZN 500 1_555 F O1 AHL . B AHL 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? metalc ? metalc12 E ZN ZN . B ZN 500 1_555 F O2 AHL . B AHL 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2IMB _atom_sites.fract_transf_matrix[1][1] 0.01347 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003635 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014721 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010536 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 500 500 ZN ZN . D 3 AHL A 1 600 600 AHL AHL . E 2 ZN B 1 500 500 ZN ZN . F 3 AHL B 1 600 600 AHL AHL . G 4 HOH A 1 601 5 HOH HOH . G 4 HOH A 2 602 6 HOH HOH . G 4 HOH A 3 603 7 HOH HOH . G 4 HOH A 4 604 11 HOH HOH . G 4 HOH A 5 605 12 HOH HOH . G 4 HOH A 6 606 16 HOH HOH . G 4 HOH A 7 607 19 HOH HOH . G 4 HOH A 8 608 20 HOH HOH . G 4 HOH A 9 609 27 HOH HOH . G 4 HOH A 10 610 28 HOH HOH . G 4 HOH A 11 611 30 HOH HOH . G 4 HOH A 12 612 31 HOH HOH . G 4 HOH A 13 613 34 HOH HOH . G 4 HOH A 14 614 38 HOH HOH . G 4 HOH A 15 615 39 HOH HOH . G 4 HOH A 16 616 41 HOH HOH . G 4 HOH A 17 617 43 HOH HOH . G 4 HOH A 18 618 44 HOH HOH . G 4 HOH A 19 619 45 HOH HOH . G 4 HOH A 20 620 47 HOH HOH . G 4 HOH A 21 621 48 HOH HOH . G 4 HOH A 22 622 49 HOH HOH . G 4 HOH A 23 623 50 HOH HOH . G 4 HOH A 24 624 55 HOH HOH . G 4 HOH A 25 625 57 HOH HOH . G 4 HOH A 26 626 59 HOH HOH . G 4 HOH A 27 627 62 HOH HOH . G 4 HOH A 28 628 63 HOH HOH . G 4 HOH A 29 629 64 HOH HOH . G 4 HOH A 30 630 65 HOH HOH . G 4 HOH A 31 631 70 HOH HOH . G 4 HOH A 32 632 78 HOH HOH . G 4 HOH A 33 633 79 HOH HOH . G 4 HOH A 34 634 81 HOH HOH . G 4 HOH A 35 635 83 HOH HOH . G 4 HOH A 36 636 84 HOH HOH . G 4 HOH A 37 637 85 HOH HOH . G 4 HOH A 38 638 86 HOH HOH . G 4 HOH A 39 639 87 HOH HOH . G 4 HOH A 40 640 97 HOH HOH . G 4 HOH A 41 641 103 HOH HOH . G 4 HOH A 42 642 104 HOH HOH . G 4 HOH A 43 643 106 HOH HOH . G 4 HOH A 44 644 107 HOH HOH . G 4 HOH A 45 645 108 HOH HOH . G 4 HOH A 46 646 109 HOH HOH . G 4 HOH A 47 647 113 HOH HOH . G 4 HOH A 48 648 115 HOH HOH . G 4 HOH A 49 649 119 HOH HOH . G 4 HOH A 50 650 120 HOH HOH . G 4 HOH A 51 651 122 HOH HOH . G 4 HOH A 52 652 123 HOH HOH . G 4 HOH A 53 653 129 HOH HOH . G 4 HOH A 54 654 131 HOH HOH . G 4 HOH A 55 655 139 HOH HOH . G 4 HOH A 56 656 142 HOH HOH . G 4 HOH A 57 657 143 HOH HOH . G 4 HOH A 58 658 148 HOH HOH . G 4 HOH A 59 659 150 HOH HOH . G 4 HOH A 60 660 157 HOH HOH . G 4 HOH A 61 661 158 HOH HOH . G 4 HOH A 62 662 159 HOH HOH . G 4 HOH A 63 663 161 HOH HOH . G 4 HOH A 64 664 163 HOH HOH . G 4 HOH A 65 665 164 HOH HOH . G 4 HOH A 66 666 173 HOH HOH . G 4 HOH A 67 667 174 HOH HOH . G 4 HOH A 68 668 175 HOH HOH . G 4 HOH A 69 669 178 HOH HOH . G 4 HOH A 70 670 179 HOH HOH . G 4 HOH A 71 671 181 HOH HOH . G 4 HOH A 72 672 182 HOH HOH . G 4 HOH A 73 673 186 HOH HOH . G 4 HOH A 74 674 187 HOH HOH . G 4 HOH A 75 675 190 HOH HOH . G 4 HOH A 76 676 192 HOH HOH . G 4 HOH A 77 677 196 HOH HOH . G 4 HOH A 78 678 199 HOH HOH . G 4 HOH A 79 679 203 HOH HOH . G 4 HOH A 80 680 207 HOH HOH . G 4 HOH A 81 681 208 HOH HOH . G 4 HOH A 82 682 216 HOH HOH . G 4 HOH A 83 683 218 HOH HOH . G 4 HOH A 84 684 219 HOH HOH . G 4 HOH A 85 685 224 HOH HOH . G 4 HOH A 86 686 227 HOH HOH . G 4 HOH A 87 687 228 HOH HOH . G 4 HOH A 88 688 229 HOH HOH . G 4 HOH A 89 689 231 HOH HOH . G 4 HOH A 90 690 234 HOH HOH . G 4 HOH A 91 691 238 HOH HOH . G 4 HOH A 92 692 239 HOH HOH . G 4 HOH A 93 693 243 HOH HOH . G 4 HOH A 94 694 245 HOH HOH . G 4 HOH A 95 695 250 HOH HOH . G 4 HOH A 96 696 255 HOH HOH . G 4 HOH A 97 697 257 HOH HOH . G 4 HOH A 98 698 263 HOH HOH . G 4 HOH A 99 699 264 HOH HOH . G 4 HOH A 100 700 268 HOH HOH . G 4 HOH A 101 701 271 HOH HOH . G 4 HOH A 102 702 272 HOH HOH . G 4 HOH A 103 703 273 HOH HOH . G 4 HOH A 104 704 276 HOH HOH . G 4 HOH A 105 705 277 HOH HOH . G 4 HOH A 106 706 278 HOH HOH . G 4 HOH A 107 707 281 HOH HOH . G 4 HOH A 108 708 284 HOH HOH . G 4 HOH A 109 709 286 HOH HOH . G 4 HOH A 110 710 288 HOH HOH . G 4 HOH A 111 711 290 HOH HOH . G 4 HOH A 112 712 291 HOH HOH . G 4 HOH A 113 713 293 HOH HOH . G 4 HOH A 114 714 295 HOH HOH . G 4 HOH A 115 715 297 HOH HOH . G 4 HOH A 116 716 298 HOH HOH . G 4 HOH A 117 717 300 HOH HOH . G 4 HOH A 118 718 301 HOH HOH . G 4 HOH A 119 719 304 HOH HOH . G 4 HOH A 120 720 307 HOH HOH . G 4 HOH A 121 721 308 HOH HOH . G 4 HOH A 122 722 309 HOH HOH . G 4 HOH A 123 723 310 HOH HOH . G 4 HOH A 124 724 312 HOH HOH . G 4 HOH A 125 725 313 HOH HOH . H 4 HOH B 1 601 1 HOH HOH . H 4 HOH B 2 602 2 HOH HOH . H 4 HOH B 3 603 3 HOH HOH . H 4 HOH B 4 604 8 HOH HOH . H 4 HOH B 5 605 9 HOH HOH . H 4 HOH B 6 606 10 HOH HOH . H 4 HOH B 7 607 13 HOH HOH . H 4 HOH B 8 608 15 HOH HOH . H 4 HOH B 9 609 17 HOH HOH . H 4 HOH B 10 610 18 HOH HOH . H 4 HOH B 11 611 21 HOH HOH . H 4 HOH B 12 612 22 HOH HOH . H 4 HOH B 13 613 23 HOH HOH . H 4 HOH B 14 614 24 HOH HOH . H 4 HOH B 15 615 25 HOH HOH . H 4 HOH B 16 616 32 HOH HOH . H 4 HOH B 17 617 33 HOH HOH . H 4 HOH B 18 618 35 HOH HOH . H 4 HOH B 19 619 36 HOH HOH . H 4 HOH B 20 620 42 HOH HOH . H 4 HOH B 21 621 46 HOH HOH . H 4 HOH B 22 622 51 HOH HOH . H 4 HOH B 23 623 52 HOH HOH . H 4 HOH B 24 624 53 HOH HOH . H 4 HOH B 25 625 54 HOH HOH . H 4 HOH B 26 626 56 HOH HOH . H 4 HOH B 27 627 58 HOH HOH . H 4 HOH B 28 628 60 HOH HOH . H 4 HOH B 29 629 61 HOH HOH . H 4 HOH B 30 630 67 HOH HOH . H 4 HOH B 31 631 68 HOH HOH . H 4 HOH B 32 632 71 HOH HOH . H 4 HOH B 33 633 72 HOH HOH . H 4 HOH B 34 634 73 HOH HOH . H 4 HOH B 35 635 74 HOH HOH . H 4 HOH B 36 636 75 HOH HOH . H 4 HOH B 37 637 76 HOH HOH . H 4 HOH B 38 638 77 HOH HOH . H 4 HOH B 39 639 80 HOH HOH . H 4 HOH B 40 640 88 HOH HOH . H 4 HOH B 41 641 89 HOH HOH . H 4 HOH B 42 642 90 HOH HOH . H 4 HOH B 43 643 91 HOH HOH . H 4 HOH B 44 644 93 HOH HOH . H 4 HOH B 45 645 94 HOH HOH . H 4 HOH B 46 646 95 HOH HOH . H 4 HOH B 47 647 96 HOH HOH . H 4 HOH B 48 648 98 HOH HOH . H 4 HOH B 49 649 99 HOH HOH . H 4 HOH B 50 650 100 HOH HOH . H 4 HOH B 51 651 101 HOH HOH . H 4 HOH B 52 652 105 HOH HOH . H 4 HOH B 53 653 111 HOH HOH . H 4 HOH B 54 654 112 HOH HOH . H 4 HOH B 55 655 114 HOH HOH . H 4 HOH B 56 656 116 HOH HOH . H 4 HOH B 57 657 117 HOH HOH . H 4 HOH B 58 658 118 HOH HOH . H 4 HOH B 59 659 121 HOH HOH . H 4 HOH B 60 660 124 HOH HOH . H 4 HOH B 61 661 125 HOH HOH . H 4 HOH B 62 662 127 HOH HOH . H 4 HOH B 63 663 128 HOH HOH . H 4 HOH B 64 664 133 HOH HOH . H 4 HOH B 65 665 135 HOH HOH . H 4 HOH B 66 666 136 HOH HOH . H 4 HOH B 67 667 137 HOH HOH . H 4 HOH B 68 668 140 HOH HOH . H 4 HOH B 69 669 141 HOH HOH . H 4 HOH B 70 670 145 HOH HOH . H 4 HOH B 71 671 146 HOH HOH . H 4 HOH B 72 672 147 HOH HOH . H 4 HOH B 73 673 149 HOH HOH . H 4 HOH B 74 674 151 HOH HOH . H 4 HOH B 75 675 152 HOH HOH . H 4 HOH B 76 676 153 HOH HOH . H 4 HOH B 77 677 154 HOH HOH . H 4 HOH B 78 678 156 HOH HOH . H 4 HOH B 79 679 160 HOH HOH . H 4 HOH B 80 680 168 HOH HOH . H 4 HOH B 81 681 170 HOH HOH . H 4 HOH B 82 682 172 HOH HOH . H 4 HOH B 83 683 176 HOH HOH . H 4 HOH B 84 684 177 HOH HOH . H 4 HOH B 85 685 180 HOH HOH . H 4 HOH B 86 686 183 HOH HOH . H 4 HOH B 87 687 185 HOH HOH . H 4 HOH B 88 688 188 HOH HOH . H 4 HOH B 89 689 189 HOH HOH . H 4 HOH B 90 690 193 HOH HOH . H 4 HOH B 91 691 194 HOH HOH . H 4 HOH B 92 692 195 HOH HOH . H 4 HOH B 93 693 197 HOH HOH . H 4 HOH B 94 694 198 HOH HOH . H 4 HOH B 95 695 200 HOH HOH . H 4 HOH B 96 696 201 HOH HOH . H 4 HOH B 97 697 204 HOH HOH . H 4 HOH B 98 698 205 HOH HOH . H 4 HOH B 99 699 206 HOH HOH . H 4 HOH B 100 700 209 HOH HOH . H 4 HOH B 101 701 210 HOH HOH . H 4 HOH B 102 702 211 HOH HOH . H 4 HOH B 103 703 212 HOH HOH . H 4 HOH B 104 704 213 HOH HOH . H 4 HOH B 105 705 217 HOH HOH . H 4 HOH B 106 706 220 HOH HOH . H 4 HOH B 107 707 221 HOH HOH . H 4 HOH B 108 708 223 HOH HOH . H 4 HOH B 109 709 225 HOH HOH . H 4 HOH B 110 710 233 HOH HOH . H 4 HOH B 111 711 236 HOH HOH . H 4 HOH B 112 712 237 HOH HOH . H 4 HOH B 113 713 246 HOH HOH . H 4 HOH B 114 714 249 HOH HOH . H 4 HOH B 115 715 252 HOH HOH . H 4 HOH B 116 716 253 HOH HOH . H 4 HOH B 117 717 254 HOH HOH . H 4 HOH B 118 718 256 HOH HOH . H 4 HOH B 119 719 258 HOH HOH . H 4 HOH B 120 720 259 HOH HOH . H 4 HOH B 121 721 261 HOH HOH . H 4 HOH B 122 722 262 HOH HOH . H 4 HOH B 123 723 267 HOH HOH . H 4 HOH B 124 724 269 HOH HOH . H 4 HOH B 125 725 275 HOH HOH . H 4 HOH B 126 726 279 HOH HOH . H 4 HOH B 127 727 280 HOH HOH . H 4 HOH B 128 728 285 HOH HOH . H 4 HOH B 129 729 287 HOH HOH . H 4 HOH B 130 730 289 HOH HOH . H 4 HOH B 131 731 292 HOH HOH . H 4 HOH B 132 732 296 HOH HOH . H 4 HOH B 133 733 299 HOH HOH . H 4 HOH B 134 734 302 HOH HOH . H 4 HOH B 135 735 303 HOH HOH . H 4 HOH B 136 736 306 HOH HOH . H 4 HOH B 137 737 314 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -5.068 _atom_site.Cartn_y -3.971 _atom_site.Cartn_z 22.255 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 500 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 1 #