data_2IME # _model_server_result.job_id f2fx0539TD6E9hzyt0l-lA _model_server_result.datetime_utc '2025-02-28 03:41:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ime # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 2IME # _exptl.entry_id 2IME _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IME _cell.length_a 71.126 _cell.length_b 75.833 _cell.length_c 38.301 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IME _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 71.126 75.833 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 185 n n N1 HN11 GSH sing 186 n n N1 HN12 GSH sing 187 n n CA1 C1 GSH sing 188 n n CA1 CB1 GSH sing 189 n n CA1 HA1 GSH sing 190 n n C1 O11 GSH doub 191 n n C1 O12 GSH sing 192 n n O12 H12 GSH sing 193 n n CB1 CG1 GSH sing 194 n n CB1 HB12 GSH sing 195 n n CB1 HB13 GSH sing 196 n n CG1 CD1 GSH sing 197 n n CG1 HG12 GSH sing 198 n n CG1 HG13 GSH sing 199 n n CD1 OE1 GSH doub 200 n n CD1 N2 GSH sing 201 n n N2 CA2 GSH sing 202 n n N2 HN2 GSH sing 203 n n CA2 C2 GSH sing 204 n n CA2 CB2 GSH sing 205 n n CA2 HA2 GSH sing 206 n n C2 O2 GSH doub 207 n n C2 N3 GSH sing 208 n n CB2 SG2 GSH sing 209 n n CB2 HB22 GSH sing 210 n n CB2 HB23 GSH sing 211 n n SG2 HSG GSH sing 212 n n N3 CA3 GSH sing 213 n n N3 HN3 GSH sing 214 n n CA3 C3 GSH sing 215 n n CA3 HA31 GSH sing 216 n n CA3 HA32 GSH sing 217 n n C3 O31 GSH doub 218 n n C3 O32 GSH sing 219 n n O32 H32 GSH sing 220 n n # _atom_sites.entry_id 2IME _atom_sites.fract_transf_matrix[1][1] 0.01406 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013187 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026109 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 306 306 PO4 PO4 . C 2 PO4 A 1 307 307 PO4 PO4 . D 2 PO4 A 1 308 308 PO4 PO4 . E 3 GSH A 1 301 301 GSH GSH . F 4 TOH A 1 304 304 TOH TOH . G 5 2C2 A 1 305 305 2C2 2C2 . H 6 CXS A 1 312 312 CXS CXS . I 7 HOH A 1 401 401 HOH HOH . I 7 HOH A 2 402 402 HOH HOH . I 7 HOH A 3 403 403 HOH HOH . I 7 HOH A 4 404 404 HOH HOH . I 7 HOH A 5 405 405 HOH HOH . I 7 HOH A 6 406 406 HOH HOH . I 7 HOH A 7 407 407 HOH HOH . I 7 HOH A 8 408 408 HOH HOH . I 7 HOH A 9 409 409 HOH HOH . I 7 HOH A 10 410 410 HOH HOH . I 7 HOH A 11 411 411 HOH HOH . I 7 HOH A 12 412 412 HOH HOH . I 7 HOH A 13 413 413 HOH HOH . I 7 HOH A 14 414 414 HOH HOH . I 7 HOH A 15 415 415 HOH HOH . I 7 HOH A 16 416 416 HOH HOH . I 7 HOH A 17 417 417 HOH HOH . I 7 HOH A 18 418 418 HOH HOH . I 7 HOH A 19 419 419 HOH HOH . I 7 HOH A 20 420 420 HOH HOH . I 7 HOH A 21 421 421 HOH HOH . I 7 HOH A 22 422 422 HOH HOH . I 7 HOH A 23 423 423 HOH HOH . I 7 HOH A 24 424 424 HOH HOH . I 7 HOH A 25 425 425 HOH HOH . I 7 HOH A 26 426 426 HOH HOH . I 7 HOH A 27 427 427 HOH HOH . I 7 HOH A 28 428 428 HOH HOH . I 7 HOH A 29 429 429 HOH HOH . I 7 HOH A 30 430 430 HOH HOH . I 7 HOH A 31 431 431 HOH HOH . I 7 HOH A 32 432 432 HOH HOH . I 7 HOH A 33 433 433 HOH HOH . I 7 HOH A 34 434 434 HOH HOH . I 7 HOH A 35 435 435 HOH HOH . I 7 HOH A 36 436 436 HOH HOH . I 7 HOH A 37 437 437 HOH HOH . I 7 HOH A 38 438 438 HOH HOH . I 7 HOH A 39 439 439 HOH HOH . I 7 HOH A 40 440 440 HOH HOH . I 7 HOH A 41 441 441 HOH HOH . I 7 HOH A 42 442 442 HOH HOH . I 7 HOH A 43 443 443 HOH HOH . I 7 HOH A 44 444 444 HOH HOH . I 7 HOH A 45 445 445 HOH HOH . I 7 HOH A 46 446 446 HOH HOH . I 7 HOH A 47 447 447 HOH HOH . I 7 HOH A 48 448 448 HOH HOH . I 7 HOH A 49 449 449 HOH HOH . I 7 HOH A 50 450 450 HOH HOH . I 7 HOH A 51 451 451 HOH HOH . I 7 HOH A 52 452 452 HOH HOH . I 7 HOH A 53 453 453 HOH HOH . I 7 HOH A 54 454 454 HOH HOH . I 7 HOH A 55 455 455 HOH HOH . I 7 HOH A 56 456 456 HOH HOH . I 7 HOH A 57 457 457 HOH HOH . I 7 HOH A 58 458 458 HOH HOH . I 7 HOH A 59 459 459 HOH HOH . I 7 HOH A 60 460 460 HOH HOH . I 7 HOH A 61 461 461 HOH HOH . I 7 HOH A 62 462 462 HOH HOH . I 7 HOH A 63 463 463 HOH HOH . I 7 HOH A 64 464 464 HOH HOH . I 7 HOH A 65 465 465 HOH HOH . I 7 HOH A 66 466 466 HOH HOH . I 7 HOH A 67 467 467 HOH HOH . I 7 HOH A 68 468 468 HOH HOH . I 7 HOH A 69 469 469 HOH HOH . I 7 HOH A 70 470 470 HOH HOH . I 7 HOH A 71 471 471 HOH HOH . I 7 HOH A 72 472 472 HOH HOH . I 7 HOH A 73 473 473 HOH HOH . I 7 HOH A 74 474 474 HOH HOH . I 7 HOH A 75 475 475 HOH HOH . I 7 HOH A 76 476 476 HOH HOH . I 7 HOH A 77 477 477 HOH HOH . I 7 HOH A 78 478 478 HOH HOH . I 7 HOH A 79 479 479 HOH HOH . I 7 HOH A 80 480 480 HOH HOH . I 7 HOH A 81 481 481 HOH HOH . I 7 HOH A 82 482 482 HOH HOH . I 7 HOH A 83 483 483 HOH HOH . I 7 HOH A 84 484 484 HOH HOH . I 7 HOH A 85 485 485 HOH HOH . I 7 HOH A 86 486 486 HOH HOH . I 7 HOH A 87 487 487 HOH HOH . I 7 HOH A 88 488 488 HOH HOH . I 7 HOH A 89 489 489 HOH HOH . I 7 HOH A 90 490 490 HOH HOH . I 7 HOH A 91 491 491 HOH HOH . I 7 HOH A 92 492 492 HOH HOH . I 7 HOH A 93 493 493 HOH HOH . I 7 HOH A 94 494 494 HOH HOH . I 7 HOH A 95 495 495 HOH HOH . I 7 HOH A 96 496 496 HOH HOH . I 7 HOH A 97 497 497 HOH HOH . I 7 HOH A 98 498 498 HOH HOH . I 7 HOH A 99 499 499 HOH HOH . I 7 HOH A 100 500 500 HOH HOH . I 7 HOH A 101 501 501 HOH HOH . I 7 HOH A 102 502 502 HOH HOH . I 7 HOH A 103 503 503 HOH HOH . I 7 HOH A 104 504 504 HOH HOH . I 7 HOH A 105 505 505 HOH HOH . I 7 HOH A 106 506 506 HOH HOH . I 7 HOH A 107 507 507 HOH HOH . I 7 HOH A 108 508 508 HOH HOH . I 7 HOH A 109 509 509 HOH HOH . I 7 HOH A 110 510 510 HOH HOH . I 7 HOH A 111 511 511 HOH HOH . I 7 HOH A 112 512 512 HOH HOH . I 7 HOH A 113 513 513 HOH HOH . I 7 HOH A 114 514 514 HOH HOH . I 7 HOH A 115 515 515 HOH HOH . I 7 HOH A 116 516 516 HOH HOH . I 7 HOH A 117 517 517 HOH HOH . I 7 HOH A 118 518 518 HOH HOH . I 7 HOH A 119 519 519 HOH HOH . I 7 HOH A 120 520 520 HOH HOH . I 7 HOH A 121 521 521 HOH HOH . I 7 HOH A 122 522 522 HOH HOH . I 7 HOH A 123 523 523 HOH HOH . I 7 HOH A 124 524 524 HOH HOH . I 7 HOH A 125 525 525 HOH HOH . I 7 HOH A 126 526 526 HOH HOH . I 7 HOH A 127 527 527 HOH HOH . I 7 HOH A 128 528 528 HOH HOH . I 7 HOH A 129 529 529 HOH HOH . I 7 HOH A 130 530 530 HOH HOH . I 7 HOH A 131 531 531 HOH HOH . I 7 HOH A 132 532 532 HOH HOH . I 7 HOH A 133 533 533 HOH HOH . I 7 HOH A 134 534 534 HOH HOH . I 7 HOH A 135 535 535 HOH HOH . I 7 HOH A 136 536 536 HOH HOH . I 7 HOH A 137 537 537 HOH HOH . I 7 HOH A 138 538 538 HOH HOH . I 7 HOH A 139 539 539 HOH HOH . I 7 HOH A 140 540 540 HOH HOH . I 7 HOH A 141 541 541 HOH HOH . I 7 HOH A 142 542 542 HOH HOH . I 7 HOH A 143 543 543 HOH HOH . I 7 HOH A 144 544 544 HOH HOH . I 7 HOH A 145 545 545 HOH HOH . I 7 HOH A 146 546 546 HOH HOH . I 7 HOH A 147 547 547 HOH HOH . I 7 HOH A 148 548 548 HOH HOH . I 7 HOH A 149 549 549 HOH HOH . I 7 HOH A 150 550 550 HOH HOH . I 7 HOH A 151 551 551 HOH HOH . I 7 HOH A 152 552 552 HOH HOH . I 7 HOH A 153 553 553 HOH HOH . I 7 HOH A 154 554 554 HOH HOH . I 7 HOH A 155 555 555 HOH HOH . I 7 HOH A 156 556 556 HOH HOH . I 7 HOH A 157 557 557 HOH HOH . I 7 HOH A 158 558 558 HOH HOH . I 7 HOH A 159 559 559 HOH HOH . I 7 HOH A 160 560 560 HOH HOH . I 7 HOH A 161 561 561 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . E 3 33.337 38.145 36.842 1 19.16 ? N1 GSH 301 A 1 HETATM 2 C CA1 GSH . . . E 3 31.979 38.601 36.573 1 18.33 ? CA1 GSH 301 A 1 HETATM 3 C C1 GSH . . . E 3 31.019 38.707 37.763 1 18.05 ? C1 GSH 301 A 1 HETATM 4 O O11 GSH . . . E 3 29.984 39.43 37.739 1 18.38 ? O11 GSH 301 A 1 HETATM 5 O O12 GSH . . . E 3 31.28 37.799 38.537 1 20.4 ? O12 GSH 301 A 1 HETATM 6 C CB1 GSH . . . E 3 31.663 38.828 35.107 1 21.82 ? CB1 GSH 301 A 1 HETATM 7 C CG1 GSH . . . E 3 30.444 39.647 34.714 1 18.68 ? CG1 GSH 301 A 1 HETATM 8 C CD1 GSH . . . E 3 30.181 39.425 33.212 1 18.08 ? CD1 GSH 301 A 1 HETATM 9 O OE1 GSH . . . E 3 30.749 38.392 32.66 1 16.71 ? OE1 GSH 301 A 1 HETATM 10 N N2 GSH . . . E 3 29.337 40.206 32.585 1 18.1 ? N2 GSH 301 A 1 HETATM 11 C CA2 GSH . . . E 3 28.936 40.059 31.194 1 16.07 ? CA2 GSH 301 A 1 HETATM 12 C C2 GSH . . . E 3 29.647 41.145 30.488 1 19.6 ? C2 GSH 301 A 1 HETATM 13 O O2 GSH . . . E 3 29.56 42.458 30.92 1 15.4 ? O2 GSH 301 A 1 HETATM 14 C CB2 GSH . C . E 3 27.387 40.111 31.181 0.5 19.66 ? CB2 GSH 301 A 1 HETATM 15 C CB2 GSH . D . E 3 27.428 40.219 31.012 0.5 18.28 ? CB2 GSH 301 A 1 HETATM 16 S SG2 GSH . C . E 3 26.596 38.921 32.345 0.5 22.33 ? SG2 GSH 301 A 1 HETATM 17 S SG2 GSH . D . E 3 26.642 38.648 31.437 0.5 20.73 ? SG2 GSH 301 A 1 HETATM 18 N N3 GSH . . . E 3 30.349 40.832 29.401 1 23.27 ? N3 GSH 301 A 1 HETATM 19 C CA3 GSH . . . E 3 31.144 41.884 28.741 1 23.68 ? CA3 GSH 301 A 1 HETATM 20 C C3 GSH . . . E 3 32.636 41.575 28.806 1 25.86 ? C3 GSH 301 A 1 HETATM 21 O O31 GSH . . . E 3 33.463 42.462 28.451 1 25.63 ? O31 GSH 301 A 1 HETATM 22 O O32 GSH . . . E 3 33.077 40.443 29.144 1 24.92 ? O32 GSH 301 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 27 _model_server_stats.element_count 22 #