data_2IMG # _model_server_result.job_id DHrZLHcfFNzpfSKWPG3Eew _model_server_result.datetime_utc '2024-11-05 01:16:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2img # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":501}' # _entry.id 2IMG # _exptl.entry_id 2IMG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 134.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description D-MALATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IMG _cell.length_a 35.97 _cell.length_b 59.253 _cell.length_c 64.4 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IMG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C THR 105 A THR 104 1_555 A N MSE 106 A MSE 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 106 A MSE 105 1_555 A N LEU 107 A LEU 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? # _chem_comp.formula 'C4 H6 O5' _chem_comp.formula_weight 134.087 _chem_comp.id MLT _chem_comp.mon_nstd_flag . _chem_comp.name D-MALATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(2R)-2-HYDROXYBUTANEDIOIC ACID;2-HYDROXY-SUCCINIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MLT doub 237 n n C1 O2 MLT sing 238 n n C1 C2 MLT sing 239 n n C2 O3 MLT sing 240 n n C2 C3 MLT sing 241 n n C2 H2 MLT sing 242 n n O3 HO3 MLT sing 243 n n C3 C4 MLT sing 244 n n C3 H31 MLT sing 245 n n C3 H32 MLT sing 246 n n C4 O4 MLT doub 247 n n C4 O5 MLT sing 248 n n O5 HO5 MLT sing 249 n n O2 H6 MLT sing 250 n n # _atom_sites.entry_id 2IMG _atom_sites.fract_transf_matrix[1][1] 0.027801 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016877 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MLT A 1 501 501 MLT MLT . C 3 HOH A 1 502 1 HOH HOH . C 3 HOH A 2 503 2 HOH HOH . C 3 HOH A 3 504 3 HOH HOH . C 3 HOH A 4 505 4 HOH HOH . C 3 HOH A 5 506 5 HOH HOH . C 3 HOH A 6 507 8 HOH HOH . C 3 HOH A 7 508 9 HOH HOH . C 3 HOH A 8 509 11 HOH HOH . C 3 HOH A 9 510 12 HOH HOH . C 3 HOH A 10 511 13 HOH HOH . C 3 HOH A 11 512 14 HOH HOH . C 3 HOH A 12 513 15 HOH HOH . C 3 HOH A 13 514 16 HOH HOH . C 3 HOH A 14 515 17 HOH HOH . C 3 HOH A 15 516 18 HOH HOH . C 3 HOH A 16 517 19 HOH HOH . C 3 HOH A 17 518 21 HOH HOH . C 3 HOH A 18 519 22 HOH HOH . C 3 HOH A 19 520 23 HOH HOH . C 3 HOH A 20 521 24 HOH HOH . C 3 HOH A 21 522 25 HOH HOH . C 3 HOH A 22 523 26 HOH HOH . C 3 HOH A 23 524 27 HOH HOH . C 3 HOH A 24 525 28 HOH HOH . C 3 HOH A 25 526 29 HOH HOH . C 3 HOH A 26 527 30 HOH HOH . C 3 HOH A 27 528 31 HOH HOH . C 3 HOH A 28 529 32 HOH HOH . C 3 HOH A 29 530 33 HOH HOH . C 3 HOH A 30 531 34 HOH HOH . C 3 HOH A 31 532 35 HOH HOH . C 3 HOH A 32 533 36 HOH HOH . C 3 HOH A 33 534 37 HOH HOH . C 3 HOH A 34 535 39 HOH HOH . C 3 HOH A 35 536 40 HOH HOH . C 3 HOH A 36 537 41 HOH HOH . C 3 HOH A 37 538 42 HOH HOH . C 3 HOH A 38 539 43 HOH HOH . C 3 HOH A 39 540 44 HOH HOH . C 3 HOH A 40 541 45 HOH HOH . C 3 HOH A 41 542 46 HOH HOH . C 3 HOH A 42 543 47 HOH HOH . C 3 HOH A 43 544 48 HOH HOH . C 3 HOH A 44 545 49 HOH HOH . C 3 HOH A 45 546 50 HOH HOH . C 3 HOH A 46 547 51 HOH HOH . C 3 HOH A 47 548 56 HOH HOH . C 3 HOH A 48 549 57 HOH HOH . C 3 HOH A 49 550 58 HOH HOH . C 3 HOH A 50 551 59 HOH HOH . C 3 HOH A 51 552 60 HOH HOH . C 3 HOH A 52 553 61 HOH HOH . C 3 HOH A 53 554 62 HOH HOH . C 3 HOH A 54 555 63 HOH HOH . C 3 HOH A 55 556 66 HOH HOH . C 3 HOH A 56 557 67 HOH HOH . C 3 HOH A 57 558 68 HOH HOH . C 3 HOH A 58 559 69 HOH HOH . C 3 HOH A 59 560 70 HOH HOH . C 3 HOH A 60 561 71 HOH HOH . C 3 HOH A 61 562 72 HOH HOH . C 3 HOH A 62 563 73 HOH HOH . C 3 HOH A 63 564 74 HOH HOH . C 3 HOH A 64 565 75 HOH HOH . C 3 HOH A 65 566 77 HOH HOH . C 3 HOH A 66 567 78 HOH HOH . C 3 HOH A 67 568 80 HOH HOH . C 3 HOH A 68 569 81 HOH HOH . C 3 HOH A 69 570 82 HOH HOH . C 3 HOH A 70 571 83 HOH HOH . C 3 HOH A 71 572 84 HOH HOH . C 3 HOH A 72 573 85 HOH HOH . C 3 HOH A 73 574 86 HOH HOH . C 3 HOH A 74 575 87 HOH HOH . C 3 HOH A 75 576 88 HOH HOH . C 3 HOH A 76 577 89 HOH HOH . C 3 HOH A 77 578 90 HOH HOH . C 3 HOH A 78 579 91 HOH HOH . C 3 HOH A 79 580 94 HOH HOH . C 3 HOH A 80 581 95 HOH HOH . C 3 HOH A 81 582 104 HOH HOH . C 3 HOH A 82 583 105 HOH HOH . C 3 HOH A 83 584 106 HOH HOH . C 3 HOH A 84 585 108 HOH HOH . C 3 HOH A 85 586 110 HOH HOH . C 3 HOH A 86 587 111 HOH HOH . C 3 HOH A 87 588 116 HOH HOH . C 3 HOH A 88 589 117 HOH HOH . C 3 HOH A 89 590 122 HOH HOH . C 3 HOH A 90 591 123 HOH HOH . C 3 HOH A 91 592 124 HOH HOH . C 3 HOH A 92 593 126 HOH HOH . C 3 HOH A 93 594 128 HOH HOH . C 3 HOH A 94 595 130 HOH HOH . C 3 HOH A 95 596 131 HOH HOH . C 3 HOH A 96 597 134 HOH HOH . C 3 HOH A 97 598 144 HOH HOH . C 3 HOH A 98 599 146 HOH HOH . C 3 HOH A 99 600 151 HOH HOH . C 3 HOH A 100 601 154 HOH HOH . C 3 HOH A 101 602 156 HOH HOH . C 3 HOH A 102 603 158 HOH HOH . C 3 HOH A 103 604 160 HOH HOH . C 3 HOH A 104 605 161 HOH HOH . C 3 HOH A 105 606 162 HOH HOH . C 3 HOH A 106 607 163 HOH HOH . C 3 HOH A 107 608 164 HOH HOH . C 3 HOH A 108 609 166 HOH HOH . C 3 HOH A 109 610 173 HOH HOH . C 3 HOH A 110 611 177 HOH HOH . C 3 HOH A 111 612 178 HOH HOH . C 3 HOH A 112 613 179 HOH HOH . C 3 HOH A 113 614 180 HOH HOH . C 3 HOH A 114 615 181 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MLT . . . B 2 10.203 15.819 5.324 1 21.21 ? C1 MLT 501 A 1 HETATM 2 O O1 MLT . . . B 2 10.339 16.472 4.321 1 23.47 ? O1 MLT 501 A 1 HETATM 3 O O2 MLT . . . B 2 9.797 16.406 6.458 1 18.94 ? O2 MLT 501 A 1 HETATM 4 C C2 MLT . . . B 2 10.483 14.319 5.294 1 20.67 ? C2 MLT 501 A 1 HETATM 5 O O3 MLT . . . B 2 10.255 13.759 6.588 1 19.37 ? O3 MLT 501 A 1 HETATM 6 C C3 MLT . . . B 2 9.581 13.638 4.228 1 19.8 ? C3 MLT 501 A 1 HETATM 7 C C4 MLT . . . B 2 8.174 13.428 4.721 1 20.83 ? C4 MLT 501 A 1 HETATM 8 O O4 MLT . . . B 2 7.839 13.774 5.836 1 17.65 ? O4 MLT 501 A 1 HETATM 9 O O5 MLT . . . B 2 7.3 12.867 3.894 1 21.58 ? O5 MLT 501 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 24 _model_server_stats.element_count 9 #