data_2INZ # _model_server_result.job_id JF-WUU64OZ_lLN0313wymw _model_server_result.datetime_utc '2024-12-05 04:25:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2inz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":316}' # _entry.id 2INZ # _exptl.entry_id 2INZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2INZ _cell.length_a 50.095 _cell.length_b 66.899 _cell.length_c 92.01 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2INZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 237 n n PA O2A NAP sing 238 n n PA O5B NAP sing 239 n n PA O3 NAP sing 240 n n O2A HOA2 NAP sing 241 n n O5B C5B NAP sing 242 n n C5B C4B NAP sing 243 n n C5B H51A NAP sing 244 n n C5B H52A NAP sing 245 n n C4B O4B NAP sing 246 n n C4B C3B NAP sing 247 n n C4B H4B NAP sing 248 n n O4B C1B NAP sing 249 n n C3B O3B NAP sing 250 n n C3B C2B NAP sing 251 n n C3B H3B NAP sing 252 n n O3B HO3A NAP sing 253 n n C2B O2B NAP sing 254 n n C2B C1B NAP sing 255 n n C2B H2B NAP sing 256 n n O2B P2B NAP sing 257 n n C1B N9A NAP sing 258 n n C1B H1B NAP sing 259 n n N9A C8A NAP sing 260 n y N9A C4A NAP sing 261 n y C8A N7A NAP doub 262 n y C8A H8A NAP sing 263 n n N7A C5A NAP sing 264 n y C5A C6A NAP sing 265 n y C5A C4A NAP doub 266 n y C6A N6A NAP sing 267 n n C6A N1A NAP doub 268 n y N6A H61A NAP sing 269 n n N6A H62A NAP sing 270 n n N1A C2A NAP sing 271 n y C2A N3A NAP doub 272 n y C2A H2A NAP sing 273 n n N3A C4A NAP sing 274 n y O3 PN NAP sing 275 n n PN O1N NAP doub 276 n n PN O2N NAP sing 277 n n PN O5D NAP sing 278 n n O5D C5D NAP sing 279 n n C5D C4D NAP sing 280 n n C5D H51N NAP sing 281 n n C5D H52N NAP sing 282 n n C4D O4D NAP sing 283 n n C4D C3D NAP sing 284 n n C4D H4D NAP sing 285 n n O4D C1D NAP sing 286 n n C3D O3D NAP sing 287 n n C3D C2D NAP sing 288 n n C3D H3D NAP sing 289 n n O3D HO3N NAP sing 290 n n C2D O2D NAP sing 291 n n C2D C1D NAP sing 292 n n C2D H2D NAP sing 293 n n O2D HO2N NAP sing 294 n n C1D N1N NAP sing 295 n n C1D H1D NAP sing 296 n n N1N C2N NAP sing 297 n y N1N C6N NAP doub 298 n y C2N C3N NAP doub 299 n y C2N H2N NAP sing 300 n n C3N C7N NAP sing 301 n n C3N C4N NAP sing 302 n y C7N O7N NAP doub 303 n n C7N N7N NAP sing 304 n n N7N H71N NAP sing 305 n n N7N H72N NAP sing 306 n n C4N C5N NAP doub 307 n y C4N H4N NAP sing 308 n n C5N C6N NAP sing 309 n y C5N H5N NAP sing 310 n n C6N H6N NAP sing 311 n n P2B O1X NAP doub 312 n n P2B O2X NAP sing 313 n n P2B O3X NAP sing 314 n n O2X HOP2 NAP sing 315 n n O3X HOP3 NAP sing 316 n n # _atom_sites.entry_id 2INZ _atom_sites.fract_transf_matrix[1][1] 0.019962 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014948 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 316 316 NAP NAP . C 3 OHP A 1 317 317 OHP OHP . D 4 HOH A 1 401 401 HOH HOH . D 4 HOH A 2 402 402 HOH HOH . D 4 HOH A 3 403 403 HOH HOH . D 4 HOH A 4 404 404 HOH HOH . D 4 HOH A 5 405 405 HOH HOH . D 4 HOH A 6 406 406 HOH HOH . D 4 HOH A 7 407 407 HOH HOH . D 4 HOH A 8 408 408 HOH HOH . D 4 HOH A 9 409 409 HOH HOH . D 4 HOH A 10 410 410 HOH HOH . D 4 HOH A 11 412 412 HOH HOH . D 4 HOH A 12 413 413 HOH HOH . D 4 HOH A 13 414 414 HOH HOH . D 4 HOH A 14 415 415 HOH HOH . D 4 HOH A 15 417 417 HOH HOH . D 4 HOH A 16 418 418 HOH HOH . D 4 HOH A 17 419 419 HOH HOH . D 4 HOH A 18 420 420 HOH HOH . D 4 HOH A 19 421 421 HOH HOH . D 4 HOH A 20 422 422 HOH HOH . D 4 HOH A 21 423 423 HOH HOH . D 4 HOH A 22 424 424 HOH HOH . D 4 HOH A 23 425 425 HOH HOH . D 4 HOH A 24 426 426 HOH HOH . D 4 HOH A 25 427 427 HOH HOH . D 4 HOH A 26 428 428 HOH HOH . D 4 HOH A 27 429 429 HOH HOH . D 4 HOH A 28 430 430 HOH HOH . D 4 HOH A 29 431 431 HOH HOH . D 4 HOH A 30 432 432 HOH HOH . D 4 HOH A 31 434 434 HOH HOH . D 4 HOH A 32 435 435 HOH HOH . D 4 HOH A 33 436 436 HOH HOH . D 4 HOH A 34 437 437 HOH HOH . D 4 HOH A 35 438 438 HOH HOH . D 4 HOH A 36 439 439 HOH HOH . D 4 HOH A 37 440 440 HOH HOH . D 4 HOH A 38 441 441 HOH HOH . D 4 HOH A 39 442 442 HOH HOH . D 4 HOH A 40 443 443 HOH HOH . D 4 HOH A 41 444 444 HOH HOH . D 4 HOH A 42 445 445 HOH HOH . D 4 HOH A 43 446 446 HOH HOH . D 4 HOH A 44 447 447 HOH HOH . D 4 HOH A 45 448 448 HOH HOH . D 4 HOH A 46 449 449 HOH HOH . D 4 HOH A 47 450 450 HOH HOH . D 4 HOH A 48 451 451 HOH HOH . D 4 HOH A 49 453 453 HOH HOH . D 4 HOH A 50 454 454 HOH HOH . D 4 HOH A 51 455 455 HOH HOH . D 4 HOH A 52 456 456 HOH HOH . D 4 HOH A 53 457 457 HOH HOH . D 4 HOH A 54 458 458 HOH HOH . D 4 HOH A 55 459 459 HOH HOH . D 4 HOH A 56 460 460 HOH HOH . D 4 HOH A 57 461 461 HOH HOH . D 4 HOH A 58 462 462 HOH HOH . D 4 HOH A 59 463 463 HOH HOH . D 4 HOH A 60 465 465 HOH HOH . D 4 HOH A 61 501 501 HOH HOH . D 4 HOH A 62 502 502 HOH HOH . D 4 HOH A 63 503 503 HOH HOH . D 4 HOH A 64 504 504 HOH HOH . D 4 HOH A 65 505 505 HOH HOH . D 4 HOH A 66 506 506 HOH HOH . D 4 HOH A 67 508 508 HOH HOH . D 4 HOH A 68 509 509 HOH HOH . D 4 HOH A 69 510 510 HOH HOH . D 4 HOH A 70 511 511 HOH HOH . D 4 HOH A 71 512 512 HOH HOH . D 4 HOH A 72 513 513 HOH HOH . D 4 HOH A 73 514 514 HOH HOH . D 4 HOH A 74 515 515 HOH HOH . D 4 HOH A 75 516 516 HOH HOH . D 4 HOH A 76 517 517 HOH HOH . D 4 HOH A 77 518 518 HOH HOH . D 4 HOH A 78 519 519 HOH HOH . D 4 HOH A 79 520 520 HOH HOH . D 4 HOH A 80 521 521 HOH HOH . D 4 HOH A 81 524 524 HOH HOH . D 4 HOH A 82 527 527 HOH HOH . D 4 HOH A 83 529 529 HOH HOH . D 4 HOH A 84 530 530 HOH HOH . D 4 HOH A 85 533 533 HOH HOH . D 4 HOH A 86 534 534 HOH HOH . D 4 HOH A 87 535 535 HOH HOH . D 4 HOH A 88 538 538 HOH HOH . D 4 HOH A 89 541 541 HOH HOH . D 4 HOH A 90 544 544 HOH HOH . D 4 HOH A 91 546 546 HOH HOH . D 4 HOH A 92 547 547 HOH HOH . D 4 HOH A 93 550 550 HOH HOH . D 4 HOH A 94 554 554 HOH HOH . D 4 HOH A 95 555 555 HOH HOH . D 4 HOH A 96 556 556 HOH HOH . D 4 HOH A 97 557 557 HOH HOH . D 4 HOH A 98 559 559 HOH HOH . D 4 HOH A 99 560 560 HOH HOH . D 4 HOH A 100 561 561 HOH HOH . D 4 HOH A 101 562 562 HOH HOH . D 4 HOH A 102 563 563 HOH HOH . D 4 HOH A 103 564 564 HOH HOH . D 4 HOH A 104 565 565 HOH HOH . D 4 HOH A 105 566 566 HOH HOH . D 4 HOH A 106 567 567 HOH HOH . D 4 HOH A 107 568 568 HOH HOH . D 4 HOH A 108 569 569 HOH HOH . D 4 HOH A 109 570 570 HOH HOH . D 4 HOH A 110 571 571 HOH HOH . D 4 HOH A 111 572 572 HOH HOH . D 4 HOH A 112 573 573 HOH HOH . D 4 HOH A 113 574 574 HOH HOH . D 4 HOH A 114 575 575 HOH HOH . D 4 HOH A 115 576 576 HOH HOH . D 4 HOH A 116 577 577 HOH HOH . D 4 HOH A 117 578 578 HOH HOH . D 4 HOH A 118 579 579 HOH HOH . D 4 HOH A 119 580 580 HOH HOH . D 4 HOH A 120 581 581 HOH HOH . D 4 HOH A 121 582 582 HOH HOH . D 4 HOH A 122 583 583 HOH HOH . D 4 HOH A 123 584 584 HOH HOH . D 4 HOH A 124 585 585 HOH HOH . D 4 HOH A 125 586 586 HOH HOH . D 4 HOH A 126 587 587 HOH HOH . D 4 HOH A 127 588 588 HOH HOH . D 4 HOH A 128 589 589 HOH HOH . D 4 HOH A 129 591 591 HOH HOH . D 4 HOH A 130 592 592 HOH HOH . D 4 HOH A 131 593 593 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . B 2 23.593 28.031 72.39 1 4.45 ? PA NAP 316 A 1 HETATM 2 O O1A NAP . . . B 2 24.507 29.058 71.9 1 4.37 ? O1A NAP 316 A 1 HETATM 3 O O2A NAP . . . B 2 22.544 28.456 73.322 1 8.34 ? O2A NAP 316 A 1 HETATM 4 O O5B NAP . . . B 2 24.423 26.822 73.035 1 4.38 ? O5B NAP 316 A 1 HETATM 5 C C5B NAP . . . B 2 23.882 25.573 73.467 1 2.35 ? C5B NAP 316 A 1 HETATM 6 C C4B NAP . . . B 2 25.062 24.695 73.857 1 3.77 ? C4B NAP 316 A 1 HETATM 7 O O4B NAP . . . B 2 25.888 25.301 74.885 1 6.08 ? O4B NAP 316 A 1 HETATM 8 C C3B NAP . . . B 2 24.648 23.364 74.412 1 3.55 ? C3B NAP 316 A 1 HETATM 9 O O3B NAP . . . B 2 25.603 22.397 74.005 1 5.67 ? O3B NAP 316 A 1 HETATM 10 C C2B NAP . . . B 2 24.76 23.511 75.911 1 6.07 ? C2B NAP 316 A 1 HETATM 11 O O2B NAP . . . B 2 25.022 22.217 76.446 1 6.93 ? O2B NAP 316 A 1 HETATM 12 C C1B NAP . . . B 2 25.974 24.423 76.027 1 5.44 ? C1B NAP 316 A 1 HETATM 13 N N9A NAP . . . B 2 25.99 25.277 77.247 1 5.17 ? N9A NAP 316 A 1 HETATM 14 C C8A NAP . . . B 2 24.929 25.858 77.842 1 4.27 ? C8A NAP 316 A 1 HETATM 15 N N7A NAP . . . B 2 25.287 26.515 78.946 1 6.39 ? N7A NAP 316 A 1 HETATM 16 C C5A NAP . . . B 2 26.598 26.328 79.018 1 7.33 ? C5A NAP 316 A 1 HETATM 17 C C6A NAP . . . B 2 27.413 26.681 80.098 1 7.55 ? C6A NAP 316 A 1 HETATM 18 N N6A NAP . . . B 2 27.013 27.468 81.09 1 6.43 ? N6A NAP 316 A 1 HETATM 19 N N1A NAP . . . B 2 28.687 26.226 80.044 1 8.1 ? N1A NAP 316 A 1 HETATM 20 C C2A NAP . . . B 2 29.143 25.499 79.024 1 6.82 ? C2A NAP 316 A 1 HETATM 21 N N3A NAP . . . B 2 28.35 25.172 78.001 1 6.29 ? N3A NAP 316 A 1 HETATM 22 C C4A NAP . . . B 2 27.065 25.557 77.974 1 5.66 ? C4A NAP 316 A 1 HETATM 23 O O3 NAP . . . B 2 22.989 27.416 71.048 1 4.73 ? O3 NAP 316 A 1 HETATM 24 P PN NAP . . . B 2 21.606 27.356 70.247 1 4.77 ? PN NAP 316 A 1 HETATM 25 O O1N NAP . . . B 2 20.793 26.262 70.804 1 5.4 ? O1N NAP 316 A 1 HETATM 26 O O2N NAP . . . B 2 22.007 27.305 68.841 1 5.73 ? O2N NAP 316 A 1 HETATM 27 O O5D NAP . . . B 2 20.938 28.794 70.568 1 5.45 ? O5D NAP 316 A 1 HETATM 28 C C5D NAP . . . B 2 19.984 28.967 71.62 1 4.98 ? C5D NAP 316 A 1 HETATM 29 C C4D NAP . . . B 2 18.548 28.881 71.134 1 4.82 ? C4D NAP 316 A 1 HETATM 30 O O4D NAP . . . B 2 18.259 29.933 70.21 1 2.87 ? O4D NAP 316 A 1 HETATM 31 C C3D NAP . . . B 2 18.132 27.591 70.436 1 3.91 ? C3D NAP 316 A 1 HETATM 32 O O3D NAP . . . B 2 17.908 26.461 71.279 1 4.96 ? O3D NAP 316 A 1 HETATM 33 C C2D NAP . . . B 2 16.822 28.108 69.875 1 4.17 ? C2D NAP 316 A 1 HETATM 34 O O2D NAP . . . B 2 15.896 28.223 70.948 1 2.75 ? O2D NAP 316 A 1 HETATM 35 C C1D NAP . . . B 2 17.205 29.491 69.356 1 2.7 ? C1D NAP 316 A 1 HETATM 36 N N1N NAP . . . B 2 17.605 29.485 67.926 1 2.63 ? N1N NAP 316 A 1 HETATM 37 C C2N NAP . . . B 2 16.724 29.995 66.967 1 2 ? C2N NAP 316 A 1 HETATM 38 C C3N NAP . . . B 2 17.035 29.896 65.604 1 2.56 ? C3N NAP 316 A 1 HETATM 39 C C7N NAP . . . B 2 16.223 30.64 64.544 1 2.62 ? C7N NAP 316 A 1 HETATM 40 O O7N NAP . . . B 2 16.399 30.448 63.338 1 3.72 ? O7N NAP 316 A 1 HETATM 41 N N7N NAP . . . B 2 15.452 31.604 65.05 1 4.29 ? N7N NAP 316 A 1 HETATM 42 C C4N NAP . . . B 2 18.203 29.238 65.203 1 2.29 ? C4N NAP 316 A 1 HETATM 43 C C5N NAP . . . B 2 19.1 28.736 66.135 1 2.29 ? C5N NAP 316 A 1 HETATM 44 C C6N NAP . . . B 2 18.813 28.887 67.491 1 2.85 ? C6N NAP 316 A 1 HETATM 45 P P2B NAP . . . B 2 23.984 21.454 77.391 1 7.91 ? P2B NAP 316 A 1 HETATM 46 O O1X NAP . . . B 2 22.677 21.654 76.739 1 5.62 ? O1X NAP 316 A 1 HETATM 47 O O2X NAP . . . B 2 24.561 20.109 77.24 1 9.97 ? O2X NAP 316 A 1 HETATM 48 O O3X NAP . . . B 2 24.161 22.056 78.725 1 6.11 ? O3X NAP 316 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 48 #