data_2ION # _model_server_result.job_id av5b3zBHiDxn1dM6PdlfLw _model_server_result.datetime_utc '2024-10-18 20:20:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ion # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 2ION # _exptl.entry_id 2ION _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ION _cell.length_a 61.536 _cell.length_b 61.536 _cell.length_c 78.066 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ION _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2ION _atom_sites.fract_transf_matrix[1][1] 0.016251 _atom_sites.fract_transf_matrix[1][2] 0.009382 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018765 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01281 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 1 1 GOL GOL . C 3 HOH A 1 472 1 HOH HOH . C 3 HOH A 2 473 2 HOH HOH . C 3 HOH A 3 474 3 HOH HOH . C 3 HOH A 4 475 4 HOH HOH . C 3 HOH A 5 476 5 HOH HOH . C 3 HOH A 6 477 6 HOH HOH . C 3 HOH A 7 478 7 HOH HOH . C 3 HOH A 8 479 8 HOH HOH . C 3 HOH A 9 480 9 HOH HOH . C 3 HOH A 10 481 10 HOH HOH . C 3 HOH A 11 482 11 HOH HOH . C 3 HOH A 12 483 12 HOH HOH . C 3 HOH A 13 484 13 HOH HOH . C 3 HOH A 14 485 14 HOH HOH . C 3 HOH A 15 486 15 HOH HOH . C 3 HOH A 16 487 16 HOH HOH . C 3 HOH A 17 488 17 HOH HOH . C 3 HOH A 18 489 18 HOH HOH . C 3 HOH A 19 490 19 HOH HOH . C 3 HOH A 20 491 20 HOH HOH . C 3 HOH A 21 492 21 HOH HOH . C 3 HOH A 22 493 22 HOH HOH . C 3 HOH A 23 494 23 HOH HOH . C 3 HOH A 24 495 24 HOH HOH . C 3 HOH A 25 496 25 HOH HOH . C 3 HOH A 26 497 26 HOH HOH . C 3 HOH A 27 498 27 HOH HOH . C 3 HOH A 28 499 28 HOH HOH . C 3 HOH A 29 500 29 HOH HOH . C 3 HOH A 30 501 30 HOH HOH . C 3 HOH A 31 502 31 HOH HOH . C 3 HOH A 32 503 32 HOH HOH . C 3 HOH A 33 504 33 HOH HOH . C 3 HOH A 34 505 34 HOH HOH . C 3 HOH A 35 506 35 HOH HOH . C 3 HOH A 36 507 36 HOH HOH . C 3 HOH A 37 508 37 HOH HOH . C 3 HOH A 38 509 38 HOH HOH . C 3 HOH A 39 510 39 HOH HOH . C 3 HOH A 40 511 40 HOH HOH . C 3 HOH A 41 512 41 HOH HOH . C 3 HOH A 42 513 42 HOH HOH . C 3 HOH A 43 514 43 HOH HOH . C 3 HOH A 44 515 44 HOH HOH . C 3 HOH A 45 516 45 HOH HOH . C 3 HOH A 46 517 46 HOH HOH . C 3 HOH A 47 518 47 HOH HOH . C 3 HOH A 48 519 48 HOH HOH . C 3 HOH A 49 520 49 HOH HOH . C 3 HOH A 50 521 50 HOH HOH . C 3 HOH A 51 522 51 HOH HOH . C 3 HOH A 52 523 52 HOH HOH . C 3 HOH A 53 524 53 HOH HOH . C 3 HOH A 54 525 54 HOH HOH . C 3 HOH A 55 526 55 HOH HOH . C 3 HOH A 56 527 56 HOH HOH . C 3 HOH A 57 528 57 HOH HOH . C 3 HOH A 58 529 58 HOH HOH . C 3 HOH A 59 530 59 HOH HOH . C 3 HOH A 60 531 60 HOH HOH . C 3 HOH A 61 532 61 HOH HOH . C 3 HOH A 62 533 62 HOH HOH . C 3 HOH A 63 534 63 HOH HOH . C 3 HOH A 64 535 64 HOH HOH . C 3 HOH A 65 536 65 HOH HOH . C 3 HOH A 66 537 66 HOH HOH . C 3 HOH A 67 538 67 HOH HOH . C 3 HOH A 68 539 68 HOH HOH . C 3 HOH A 69 540 69 HOH HOH . C 3 HOH A 70 541 70 HOH HOH . C 3 HOH A 71 542 71 HOH HOH . C 3 HOH A 72 543 72 HOH HOH . C 3 HOH A 73 544 73 HOH HOH . C 3 HOH A 74 545 74 HOH HOH . C 3 HOH A 75 546 75 HOH HOH . C 3 HOH A 76 547 77 HOH HOH . C 3 HOH A 77 548 78 HOH HOH . C 3 HOH A 78 549 79 HOH HOH . C 3 HOH A 79 550 80 HOH HOH . C 3 HOH A 80 551 81 HOH HOH . C 3 HOH A 81 552 82 HOH HOH . C 3 HOH A 82 553 83 HOH HOH . C 3 HOH A 83 554 84 HOH HOH . C 3 HOH A 84 555 85 HOH HOH . C 3 HOH A 85 556 86 HOH HOH . C 3 HOH A 86 557 87 HOH HOH . C 3 HOH A 87 558 88 HOH HOH . C 3 HOH A 88 559 89 HOH HOH . C 3 HOH A 89 560 90 HOH HOH . C 3 HOH A 90 561 91 HOH HOH . C 3 HOH A 91 562 92 HOH HOH . C 3 HOH A 92 563 93 HOH HOH . C 3 HOH A 93 564 94 HOH HOH . C 3 HOH A 94 565 95 HOH HOH . C 3 HOH A 95 566 96 HOH HOH . C 3 HOH A 96 567 97 HOH HOH . C 3 HOH A 97 568 98 HOH HOH . C 3 HOH A 98 569 99 HOH HOH . C 3 HOH A 99 570 100 HOH HOH . C 3 HOH A 100 571 101 HOH HOH . C 3 HOH A 101 572 102 HOH HOH . C 3 HOH A 102 573 103 HOH HOH . C 3 HOH A 103 574 104 HOH HOH . C 3 HOH A 104 575 105 HOH HOH . C 3 HOH A 105 576 106 HOH HOH . C 3 HOH A 106 577 107 HOH HOH . C 3 HOH A 107 578 108 HOH HOH . C 3 HOH A 108 579 109 HOH HOH . C 3 HOH A 109 580 110 HOH HOH . C 3 HOH A 110 581 111 HOH HOH . C 3 HOH A 111 582 112 HOH HOH . C 3 HOH A 112 583 113 HOH HOH . C 3 HOH A 113 584 114 HOH HOH . C 3 HOH A 114 585 115 HOH HOH . C 3 HOH A 115 586 116 HOH HOH . C 3 HOH A 116 587 117 HOH HOH . C 3 HOH A 117 588 118 HOH HOH . C 3 HOH A 118 589 119 HOH HOH . C 3 HOH A 119 590 120 HOH HOH . C 3 HOH A 120 591 121 HOH HOH . C 3 HOH A 121 592 122 HOH HOH . C 3 HOH A 122 593 123 HOH HOH . C 3 HOH A 123 594 124 HOH HOH . C 3 HOH A 124 595 125 HOH HOH . C 3 HOH A 125 596 126 HOH HOH . C 3 HOH A 126 597 127 HOH HOH . C 3 HOH A 127 598 128 HOH HOH . C 3 HOH A 128 599 129 HOH HOH . C 3 HOH A 129 600 130 HOH HOH . C 3 HOH A 130 601 131 HOH HOH . C 3 HOH A 131 602 132 HOH HOH . C 3 HOH A 132 603 133 HOH HOH . C 3 HOH A 133 604 134 HOH HOH . C 3 HOH A 134 605 135 HOH HOH . C 3 HOH A 135 606 136 HOH HOH . C 3 HOH A 136 607 137 HOH HOH . C 3 HOH A 137 608 138 HOH HOH . C 3 HOH A 138 609 139 HOH HOH . C 3 HOH A 139 610 140 HOH HOH . C 3 HOH A 140 611 141 HOH HOH . C 3 HOH A 141 612 142 HOH HOH . C 3 HOH A 142 613 143 HOH HOH . C 3 HOH A 143 614 144 HOH HOH . C 3 HOH A 144 615 145 HOH HOH . C 3 HOH A 145 616 146 HOH HOH . C 3 HOH A 146 617 147 HOH HOH . C 3 HOH A 147 618 148 HOH HOH . C 3 HOH A 148 619 149 HOH HOH . C 3 HOH A 149 620 150 HOH HOH . C 3 HOH A 150 621 151 HOH HOH . C 3 HOH A 151 622 152 HOH HOH . C 3 HOH A 152 623 153 HOH HOH . C 3 HOH A 153 624 154 HOH HOH . C 3 HOH A 154 625 155 HOH HOH . C 3 HOH A 155 626 156 HOH HOH . C 3 HOH A 156 627 157 HOH HOH . C 3 HOH A 157 628 158 HOH HOH . C 3 HOH A 158 629 159 HOH HOH . C 3 HOH A 159 630 160 HOH HOH . C 3 HOH A 160 631 161 HOH HOH . C 3 HOH A 161 632 162 HOH HOH . C 3 HOH A 162 633 163 HOH HOH . C 3 HOH A 163 634 164 HOH HOH . C 3 HOH A 164 635 165 HOH HOH . C 3 HOH A 165 636 166 HOH HOH . C 3 HOH A 166 637 167 HOH HOH . C 3 HOH A 167 638 168 HOH HOH . C 3 HOH A 168 639 169 HOH HOH . C 3 HOH A 169 640 170 HOH HOH . C 3 HOH A 170 641 172 HOH HOH . C 3 HOH A 171 642 173 HOH HOH . C 3 HOH A 172 643 174 HOH HOH . C 3 HOH A 173 644 175 HOH HOH . C 3 HOH A 174 645 176 HOH HOH . C 3 HOH A 175 646 177 HOH HOH . C 3 HOH A 176 647 178 HOH HOH . C 3 HOH A 177 648 179 HOH HOH . C 3 HOH A 178 649 181 HOH HOH . C 3 HOH A 179 650 182 HOH HOH . C 3 HOH A 180 651 184 HOH HOH . C 3 HOH A 181 652 185 HOH HOH . C 3 HOH A 182 653 186 HOH HOH . C 3 HOH A 183 654 187 HOH HOH . C 3 HOH A 184 655 188 HOH HOH . C 3 HOH A 185 656 189 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 5.045 32.871 -8.427 1 34.12 ? C1 GOL 1 A 1 HETATM 2 O O1 GOL . . . B 2 5.189 34.224 -8.832 1 35.62 ? O1 GOL 1 A 1 HETATM 3 C C2 GOL . . . B 2 3.76 32.564 -7.662 1 35.04 ? C2 GOL 1 A 1 HETATM 4 O O2 GOL . . . B 2 3.181 33.673 -6.987 1 30.76 ? O2 GOL 1 A 1 HETATM 5 C C3 GOL . . . B 2 4.062 31.442 -6.689 1 32.3 ? C3 GOL 1 A 1 HETATM 6 O O3 GOL . . . B 2 4.755 30.363 -7.336 1 31.95 ? O3 GOL 1 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #