data_2IPZ # _model_server_result.job_id JxSMo2_5NPLht6wSBMYfJg _model_server_result.datetime_utc '2024-12-24 12:24:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ipz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 2IPZ # _exptl.entry_id 2IPZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.77 _cell.angle_gamma 90 _cell.entry_id 2IPZ _cell.length_a 23.783 _cell.length_b 53.878 _cell.length_c 52.016 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IPZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 2IPZ _atom_sites.fract_transf_matrix[1][1] 0.042047 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004249 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01856 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GOL B 1 201 201 GOL GOL . F 3 IPA D 1 301 301 IPA IPA . G 4 HOH A 1 35 6 HOH WAT . G 4 HOH A 2 36 8 HOH WAT . G 4 HOH A 3 37 12 HOH WAT . G 4 HOH A 4 38 13 HOH WAT . G 4 HOH A 5 39 14 HOH WAT . G 4 HOH A 6 40 16 HOH WAT . G 4 HOH A 7 41 35 HOH WAT . G 4 HOH A 8 42 45 HOH WAT . G 4 HOH A 9 43 47 HOH WAT . G 4 HOH A 10 44 52 HOH WAT . G 4 HOH A 11 45 53 HOH WAT . G 4 HOH A 12 46 55 HOH WAT . G 4 HOH A 13 47 59 HOH WAT . G 4 HOH A 14 48 63 HOH WAT . G 4 HOH A 15 49 70 HOH WAT . G 4 HOH A 16 50 78 HOH WAT . G 4 HOH A 17 51 86 HOH WAT . G 4 HOH A 18 52 90 HOH WAT . G 4 HOH A 19 53 98 HOH WAT . G 4 HOH A 20 54 100 HOH WAT . G 4 HOH A 21 55 101 HOH WAT . G 4 HOH A 22 56 109 HOH WAT . G 4 HOH A 23 57 117 HOH WAT . G 4 HOH A 24 58 124 HOH WAT . G 4 HOH A 25 59 134 HOH WAT . G 4 HOH A 26 60 138 HOH WAT . G 4 HOH A 27 61 141 HOH WAT . G 4 HOH A 28 62 142 HOH WAT . G 4 HOH A 29 63 143 HOH WAT . G 4 HOH A 30 64 145 HOH WAT . G 4 HOH A 31 65 152 HOH WAT . H 4 HOH B 1 202 2 HOH WAT . H 4 HOH B 2 203 3 HOH WAT . H 4 HOH B 3 204 5 HOH WAT . H 4 HOH B 4 205 9 HOH WAT . H 4 HOH B 5 206 19 HOH WAT . H 4 HOH B 6 207 20 HOH WAT . H 4 HOH B 7 208 24 HOH WAT . H 4 HOH B 8 209 29 HOH WAT . H 4 HOH B 9 210 31 HOH WAT . H 4 HOH B 10 211 32 HOH WAT . H 4 HOH B 11 212 34 HOH WAT . H 4 HOH B 12 213 36 HOH WAT . H 4 HOH B 13 214 38 HOH WAT . H 4 HOH B 14 215 48 HOH WAT . H 4 HOH B 15 216 49 HOH WAT . H 4 HOH B 16 217 54 HOH WAT . H 4 HOH B 17 218 60 HOH WAT . H 4 HOH B 18 219 65 HOH WAT . H 4 HOH B 19 220 69 HOH WAT . H 4 HOH B 20 221 80 HOH WAT . H 4 HOH B 21 222 85 HOH WAT . H 4 HOH B 22 223 89 HOH WAT . H 4 HOH B 23 224 91 HOH WAT . H 4 HOH B 24 225 94 HOH WAT . H 4 HOH B 25 226 95 HOH WAT . H 4 HOH B 26 227 96 HOH WAT . H 4 HOH B 27 228 97 HOH WAT . H 4 HOH B 28 229 102 HOH WAT . H 4 HOH B 29 230 103 HOH WAT . H 4 HOH B 30 231 108 HOH WAT . H 4 HOH B 31 232 111 HOH WAT . H 4 HOH B 32 233 116 HOH WAT . H 4 HOH B 33 234 122 HOH WAT . H 4 HOH B 34 235 123 HOH WAT . H 4 HOH B 35 236 125 HOH WAT . H 4 HOH B 36 237 127 HOH WAT . H 4 HOH B 37 238 132 HOH WAT . H 4 HOH B 38 239 133 HOH WAT . H 4 HOH B 39 240 135 HOH WAT . H 4 HOH B 40 241 149 HOH WAT . H 4 HOH B 41 242 150 HOH WAT . H 4 HOH B 42 243 151 HOH WAT . H 4 HOH B 43 244 153 HOH WAT . H 4 HOH B 44 245 157 HOH WAT . H 4 HOH B 45 246 158 HOH WAT . H 4 HOH B 46 247 159 HOH WAT . H 4 HOH B 47 248 160 HOH WAT . H 4 HOH B 48 249 162 HOH WAT . H 4 HOH B 49 250 164 HOH WAT . I 4 HOH C 1 35 21 HOH WAT . I 4 HOH C 2 36 22 HOH WAT . I 4 HOH C 3 37 23 HOH WAT . I 4 HOH C 4 38 28 HOH WAT . I 4 HOH C 5 39 40 HOH WAT . I 4 HOH C 6 40 41 HOH WAT . I 4 HOH C 7 41 44 HOH WAT . I 4 HOH C 8 42 57 HOH WAT . I 4 HOH C 9 43 58 HOH WAT . I 4 HOH C 10 44 64 HOH WAT . I 4 HOH C 11 45 66 HOH WAT . I 4 HOH C 12 46 67 HOH WAT . I 4 HOH C 13 47 68 HOH WAT . I 4 HOH C 14 48 75 HOH WAT . I 4 HOH C 15 49 76 HOH WAT . I 4 HOH C 16 50 79 HOH WAT . I 4 HOH C 17 51 82 HOH WAT . I 4 HOH C 18 52 93 HOH WAT . I 4 HOH C 19 53 99 HOH WAT . I 4 HOH C 20 54 104 HOH WAT . I 4 HOH C 21 55 105 HOH WAT . I 4 HOH C 22 56 106 HOH WAT . I 4 HOH C 23 57 107 HOH WAT . I 4 HOH C 24 58 112 HOH WAT . I 4 HOH C 25 59 113 HOH WAT . I 4 HOH C 26 60 114 HOH WAT . I 4 HOH C 27 61 119 HOH WAT . I 4 HOH C 28 62 120 HOH WAT . I 4 HOH C 29 63 121 HOH WAT . I 4 HOH C 30 64 126 HOH WAT . I 4 HOH C 31 65 128 HOH WAT . I 4 HOH C 32 66 129 HOH WAT . I 4 HOH C 33 67 130 HOH WAT . I 4 HOH C 34 68 139 HOH WAT . I 4 HOH C 35 69 140 HOH WAT . I 4 HOH C 36 70 154 HOH WAT . I 4 HOH C 37 71 156 HOH WAT . I 4 HOH C 38 72 161 HOH WAT . J 4 HOH D 1 302 1 HOH WAT . J 4 HOH D 2 303 4 HOH WAT . J 4 HOH D 3 304 7 HOH WAT . J 4 HOH D 4 305 10 HOH WAT . J 4 HOH D 5 306 11 HOH WAT . J 4 HOH D 6 307 15 HOH WAT . J 4 HOH D 7 308 17 HOH WAT . J 4 HOH D 8 309 18 HOH WAT . J 4 HOH D 9 310 25 HOH WAT . J 4 HOH D 10 311 26 HOH WAT . J 4 HOH D 11 312 27 HOH WAT . J 4 HOH D 12 313 30 HOH WAT . J 4 HOH D 13 314 33 HOH WAT . J 4 HOH D 14 315 37 HOH WAT . J 4 HOH D 15 316 39 HOH WAT . J 4 HOH D 16 317 42 HOH WAT . J 4 HOH D 17 318 43 HOH WAT . J 4 HOH D 18 319 46 HOH WAT . J 4 HOH D 19 320 50 HOH WAT . J 4 HOH D 20 321 51 HOH WAT . J 4 HOH D 21 322 56 HOH WAT . J 4 HOH D 22 323 61 HOH WAT . J 4 HOH D 23 324 62 HOH WAT . J 4 HOH D 24 325 71 HOH WAT . J 4 HOH D 25 326 72 HOH WAT . J 4 HOH D 26 327 73 HOH WAT . J 4 HOH D 27 328 74 HOH WAT . J 4 HOH D 28 329 77 HOH WAT . J 4 HOH D 29 330 81 HOH WAT . J 4 HOH D 30 331 83 HOH WAT . J 4 HOH D 31 332 84 HOH WAT . J 4 HOH D 32 333 87 HOH WAT . J 4 HOH D 33 334 88 HOH WAT . J 4 HOH D 34 335 92 HOH WAT . J 4 HOH D 35 336 110 HOH WAT . J 4 HOH D 36 337 115 HOH WAT . J 4 HOH D 37 338 118 HOH WAT . J 4 HOH D 38 339 131 HOH WAT . J 4 HOH D 39 340 136 HOH WAT . J 4 HOH D 40 341 137 HOH WAT . J 4 HOH D 41 342 144 HOH WAT . J 4 HOH D 42 343 146 HOH WAT . J 4 HOH D 43 344 147 HOH WAT . J 4 HOH D 44 345 148 HOH WAT . J 4 HOH D 45 346 155 HOH WAT . J 4 HOH D 46 347 163 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 2 14.149 18.189 46.816 1 34.58 ? C1 GOL 201 B 1 HETATM 2 O O1 GOL . . . E 2 15.258 18.037 47.677 1 35.52 ? O1 GOL 201 B 1 HETATM 3 C C2 GOL . . . E 2 14.635 18.393 45.384 1 34.73 ? C2 GOL 201 B 1 HETATM 4 O O2 GOL . . . E 2 15.277 17.226 44.916 1 36.3 ? O2 GOL 201 B 1 HETATM 5 C C3 GOL . . . E 2 13.467 18.731 44.467 1 34.67 ? C3 GOL 201 B 1 HETATM 6 O O3 GOL . . . E 2 13.877 19.709 43.538 1 35.76 ? O3 GOL 201 B 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #