data_2IQ0 # _model_server_result.job_id GBHAKK96GXKMzNBApz54-w _model_server_result.datetime_utc '2024-12-05 04:42:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2iq0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":316}' # _entry.id 2IQ0 # _exptl.entry_id 2IQ0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IQ0 _cell.length_a 49.988 _cell.length_b 66.984 _cell.length_c 91.935 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IQ0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 256 n n PA O2A NAP sing 257 n n PA O5B NAP sing 258 n n PA O3 NAP sing 259 n n O2A HOA2 NAP sing 260 n n O5B C5B NAP sing 261 n n C5B C4B NAP sing 262 n n C5B H51A NAP sing 263 n n C5B H52A NAP sing 264 n n C4B O4B NAP sing 265 n n C4B C3B NAP sing 266 n n C4B H4B NAP sing 267 n n O4B C1B NAP sing 268 n n C3B O3B NAP sing 269 n n C3B C2B NAP sing 270 n n C3B H3B NAP sing 271 n n O3B HO3A NAP sing 272 n n C2B O2B NAP sing 273 n n C2B C1B NAP sing 274 n n C2B H2B NAP sing 275 n n O2B P2B NAP sing 276 n n C1B N9A NAP sing 277 n n C1B H1B NAP sing 278 n n N9A C8A NAP sing 279 n y N9A C4A NAP sing 280 n y C8A N7A NAP doub 281 n y C8A H8A NAP sing 282 n n N7A C5A NAP sing 283 n y C5A C6A NAP sing 284 n y C5A C4A NAP doub 285 n y C6A N6A NAP sing 286 n n C6A N1A NAP doub 287 n y N6A H61A NAP sing 288 n n N6A H62A NAP sing 289 n n N1A C2A NAP sing 290 n y C2A N3A NAP doub 291 n y C2A H2A NAP sing 292 n n N3A C4A NAP sing 293 n y O3 PN NAP sing 294 n n PN O1N NAP doub 295 n n PN O2N NAP sing 296 n n PN O5D NAP sing 297 n n O5D C5D NAP sing 298 n n C5D C4D NAP sing 299 n n C5D H51N NAP sing 300 n n C5D H52N NAP sing 301 n n C4D O4D NAP sing 302 n n C4D C3D NAP sing 303 n n C4D H4D NAP sing 304 n n O4D C1D NAP sing 305 n n C3D O3D NAP sing 306 n n C3D C2D NAP sing 307 n n C3D H3D NAP sing 308 n n O3D HO3N NAP sing 309 n n C2D O2D NAP sing 310 n n C2D C1D NAP sing 311 n n C2D H2D NAP sing 312 n n O2D HO2N NAP sing 313 n n C1D N1N NAP sing 314 n n C1D H1D NAP sing 315 n n N1N C2N NAP sing 316 n y N1N C6N NAP doub 317 n y C2N C3N NAP doub 318 n y C2N H2N NAP sing 319 n n C3N C7N NAP sing 320 n n C3N C4N NAP sing 321 n y C7N O7N NAP doub 322 n n C7N N7N NAP sing 323 n n N7N H71N NAP sing 324 n n N7N H72N NAP sing 325 n n C4N C5N NAP doub 326 n y C4N H4N NAP sing 327 n n C5N C6N NAP sing 328 n y C5N H5N NAP sing 329 n n C6N H6N NAP sing 330 n n P2B O1X NAP doub 331 n n P2B O2X NAP sing 332 n n P2B O3X NAP sing 333 n n O2X HOP2 NAP sing 334 n n O3X HOP3 NAP sing 335 n n # _atom_sites.entry_id 2IQ0 _atom_sites.fract_transf_matrix[1][1] 0.020005 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014929 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010877 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 316 316 NAP NAP . C 3 6NA A 1 317 317 6NA 6NA . D 4 HOH A 1 401 401 HOH WAT . D 4 HOH A 2 402 402 HOH WAT . D 4 HOH A 3 403 403 HOH WAT . D 4 HOH A 4 404 404 HOH WAT . D 4 HOH A 5 405 405 HOH WAT . D 4 HOH A 6 406 406 HOH WAT . D 4 HOH A 7 407 407 HOH WAT . D 4 HOH A 8 408 408 HOH WAT . D 4 HOH A 9 409 409 HOH WAT . D 4 HOH A 10 410 410 HOH WAT . D 4 HOH A 11 411 411 HOH WAT . D 4 HOH A 12 412 412 HOH WAT . D 4 HOH A 13 413 413 HOH WAT . D 4 HOH A 14 414 414 HOH WAT . D 4 HOH A 15 415 415 HOH WAT . D 4 HOH A 16 416 416 HOH WAT . D 4 HOH A 17 417 417 HOH WAT . D 4 HOH A 18 418 418 HOH WAT . D 4 HOH A 19 419 419 HOH WAT . D 4 HOH A 20 420 420 HOH WAT . D 4 HOH A 21 421 421 HOH WAT . D 4 HOH A 22 422 422 HOH WAT . D 4 HOH A 23 423 423 HOH WAT . D 4 HOH A 24 424 424 HOH WAT . D 4 HOH A 25 425 425 HOH WAT . D 4 HOH A 26 426 426 HOH WAT . D 4 HOH A 27 427 427 HOH WAT . D 4 HOH A 28 428 428 HOH WAT . D 4 HOH A 29 429 429 HOH WAT . D 4 HOH A 30 430 430 HOH WAT . D 4 HOH A 31 431 431 HOH WAT . D 4 HOH A 32 432 432 HOH WAT . D 4 HOH A 33 433 433 HOH WAT . D 4 HOH A 34 434 434 HOH WAT . D 4 HOH A 35 435 435 HOH WAT . D 4 HOH A 36 436 436 HOH WAT . D 4 HOH A 37 437 437 HOH WAT . D 4 HOH A 38 438 438 HOH WAT . D 4 HOH A 39 439 439 HOH WAT . D 4 HOH A 40 440 440 HOH WAT . D 4 HOH A 41 441 441 HOH WAT . D 4 HOH A 42 442 442 HOH WAT . D 4 HOH A 43 443 443 HOH WAT . D 4 HOH A 44 444 444 HOH WAT . D 4 HOH A 45 445 445 HOH WAT . D 4 HOH A 46 446 446 HOH WAT . D 4 HOH A 47 447 447 HOH WAT . D 4 HOH A 48 448 448 HOH WAT . D 4 HOH A 49 449 449 HOH WAT . D 4 HOH A 50 450 450 HOH WAT . D 4 HOH A 51 451 451 HOH WAT . D 4 HOH A 52 452 452 HOH WAT . D 4 HOH A 53 453 453 HOH WAT . D 4 HOH A 54 454 454 HOH WAT . D 4 HOH A 55 455 455 HOH WAT . D 4 HOH A 56 456 456 HOH WAT . D 4 HOH A 57 457 457 HOH WAT . D 4 HOH A 58 458 458 HOH WAT . D 4 HOH A 59 459 459 HOH WAT . D 4 HOH A 60 460 460 HOH WAT . D 4 HOH A 61 461 461 HOH WAT . D 4 HOH A 62 462 462 HOH WAT . D 4 HOH A 63 463 463 HOH WAT . D 4 HOH A 64 464 464 HOH WAT . D 4 HOH A 65 465 465 HOH WAT . D 4 HOH A 66 500 500 HOH WAT . D 4 HOH A 67 501 501 HOH WAT . D 4 HOH A 68 502 502 HOH WAT . D 4 HOH A 69 503 503 HOH WAT . D 4 HOH A 70 505 505 HOH WAT . D 4 HOH A 71 506 506 HOH WAT . D 4 HOH A 72 507 507 HOH WAT . D 4 HOH A 73 508 508 HOH WAT . D 4 HOH A 74 509 509 HOH WAT . D 4 HOH A 75 510 510 HOH WAT . D 4 HOH A 76 511 511 HOH WAT . D 4 HOH A 77 512 512 HOH WAT . D 4 HOH A 78 514 514 HOH WAT . D 4 HOH A 79 515 515 HOH WAT . D 4 HOH A 80 516 516 HOH WAT . D 4 HOH A 81 517 517 HOH WAT . D 4 HOH A 82 518 518 HOH WAT . D 4 HOH A 83 519 519 HOH WAT . D 4 HOH A 84 520 520 HOH WAT . D 4 HOH A 85 521 521 HOH WAT . D 4 HOH A 86 522 522 HOH WAT . D 4 HOH A 87 523 523 HOH WAT . D 4 HOH A 88 524 524 HOH WAT . D 4 HOH A 89 526 526 HOH WAT . D 4 HOH A 90 527 527 HOH WAT . D 4 HOH A 91 528 528 HOH WAT . D 4 HOH A 92 529 529 HOH WAT . D 4 HOH A 93 530 530 HOH WAT . D 4 HOH A 94 532 532 HOH WAT . D 4 HOH A 95 533 533 HOH WAT . D 4 HOH A 96 534 534 HOH WAT . D 4 HOH A 97 535 535 HOH WAT . D 4 HOH A 98 536 536 HOH WAT . D 4 HOH A 99 537 537 HOH WAT . D 4 HOH A 100 538 538 HOH WAT . D 4 HOH A 101 540 540 HOH WAT . D 4 HOH A 102 541 541 HOH WAT . D 4 HOH A 103 542 542 HOH WAT . D 4 HOH A 104 543 543 HOH WAT . D 4 HOH A 105 544 544 HOH WAT . D 4 HOH A 106 546 546 HOH WAT . D 4 HOH A 107 547 547 HOH WAT . D 4 HOH A 108 550 550 HOH WAT . D 4 HOH A 109 552 552 HOH WAT . D 4 HOH A 110 554 554 HOH WAT . D 4 HOH A 111 555 555 HOH WAT . D 4 HOH A 112 556 556 HOH WAT . D 4 HOH A 113 557 557 HOH WAT . D 4 HOH A 114 558 558 HOH WAT . D 4 HOH A 115 559 559 HOH WAT . D 4 HOH A 116 560 560 HOH WAT . D 4 HOH A 117 561 561 HOH WAT . D 4 HOH A 118 562 562 HOH WAT . D 4 HOH A 119 563 563 HOH WAT . D 4 HOH A 120 564 564 HOH WAT . D 4 HOH A 121 565 565 HOH WAT . D 4 HOH A 122 566 566 HOH WAT . D 4 HOH A 123 567 567 HOH WAT . D 4 HOH A 124 568 568 HOH WAT . D 4 HOH A 125 569 569 HOH WAT . D 4 HOH A 126 570 570 HOH WAT . D 4 HOH A 127 571 571 HOH WAT . D 4 HOH A 128 572 572 HOH WAT . D 4 HOH A 129 573 573 HOH WAT . D 4 HOH A 130 574 574 HOH WAT . D 4 HOH A 131 575 575 HOH WAT . D 4 HOH A 132 576 576 HOH WAT . D 4 HOH A 133 577 577 HOH WAT . D 4 HOH A 134 578 578 HOH WAT . D 4 HOH A 135 579 579 HOH WAT . D 4 HOH A 136 580 580 HOH WAT . D 4 HOH A 137 581 581 HOH WAT . D 4 HOH A 138 582 582 HOH WAT . D 4 HOH A 139 583 583 HOH WAT . D 4 HOH A 140 584 584 HOH WAT . D 4 HOH A 141 585 585 HOH WAT . D 4 HOH A 142 586 586 HOH WAT . D 4 HOH A 143 587 587 HOH WAT . D 4 HOH A 144 588 588 HOH WAT . D 4 HOH A 145 589 589 HOH WAT . D 4 HOH A 146 590 590 HOH WAT . D 4 HOH A 147 591 591 HOH WAT . D 4 HOH A 148 592 592 HOH WAT . D 4 HOH A 149 593 593 HOH WAT . D 4 HOH A 150 594 594 HOH WAT . D 4 HOH A 151 595 595 HOH WAT . D 4 HOH A 152 596 596 HOH WAT . D 4 HOH A 153 597 597 HOH WAT . D 4 HOH A 154 598 598 HOH WAT . D 4 HOH A 155 599 599 HOH WAT . D 4 HOH A 156 600 600 HOH WAT . D 4 HOH A 157 601 601 HOH WAT . D 4 HOH A 158 602 602 HOH WAT . D 4 HOH A 159 604 604 HOH WAT . D 4 HOH A 160 605 605 HOH WAT . D 4 HOH A 161 606 606 HOH WAT . D 4 HOH A 162 607 607 HOH WAT . D 4 HOH A 163 608 608 HOH WAT . D 4 HOH A 164 609 609 HOH WAT . D 4 HOH A 165 610 610 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . B 2 23.531 28.153 72.319 1 7.91 ? PA NAP 316 A 1 HETATM 2 O O1A NAP . . . B 2 24.407 29.166 71.723 1 8.87 ? O1A NAP 316 A 1 HETATM 3 O O2A NAP . . . B 2 22.605 28.541 73.392 1 11.1 ? O2A NAP 316 A 1 HETATM 4 O O5B NAP . . . B 2 24.436 26.949 72.829 1 7.79 ? O5B NAP 316 A 1 HETATM 5 C C5B NAP . . . B 2 23.833 25.761 73.334 1 7.72 ? C5B NAP 316 A 1 HETATM 6 C C4B NAP . . . B 2 24.977 24.839 73.715 1 7.81 ? C4B NAP 316 A 1 HETATM 7 O O4B NAP . . . B 2 25.789 25.468 74.731 1 11.06 ? O4B NAP 316 A 1 HETATM 8 C C3B NAP . . . B 2 24.541 23.513 74.304 1 9.24 ? C3B NAP 316 A 1 HETATM 9 O O3B NAP . . . B 2 25.421 22.482 73.877 1 13.15 ? O3B NAP 316 A 1 HETATM 10 C C2B NAP . . . B 2 24.656 23.69 75.798 1 10.27 ? C2B NAP 316 A 1 HETATM 11 O O2B NAP . . . B 2 24.949 22.427 76.399 1 10.64 ? O2B NAP 316 A 1 HETATM 12 C C1B NAP . . . B 2 25.825 24.636 75.897 1 9.81 ? C1B NAP 316 A 1 HETATM 13 N N9A NAP . . . B 2 25.774 25.468 77.122 1 11.02 ? N9A NAP 316 A 1 HETATM 14 C C8A NAP . . . B 2 24.715 26.113 77.648 1 12.63 ? C8A NAP 316 A 1 HETATM 15 N N7A NAP . . . B 2 25.076 26.752 78.766 1 13.18 ? N7A NAP 316 A 1 HETATM 16 C C5A NAP . . . B 2 26.365 26.471 78.911 1 11.49 ? C5A NAP 316 A 1 HETATM 17 C C6A NAP . . . B 2 27.193 26.881 79.959 1 14.27 ? C6A NAP 316 A 1 HETATM 18 N N6A NAP . . . B 2 26.783 27.663 80.955 1 12.7 ? N6A NAP 316 A 1 HETATM 19 N N1A NAP . . . B 2 28.471 26.44 79.914 1 13.88 ? N1A NAP 316 A 1 HETATM 20 C C2A NAP . . . B 2 28.918 25.668 78.917 1 12.06 ? C2A NAP 316 A 1 HETATM 21 N N3A NAP . . . B 2 28.122 25.291 77.917 1 10.8 ? N3A NAP 316 A 1 HETATM 22 C C4A NAP . . . B 2 26.829 25.672 77.898 1 10.63 ? C4A NAP 316 A 1 HETATM 23 O O3 NAP . . . B 2 22.822 27.351 71.12 1 10.07 ? O3 NAP 316 A 1 HETATM 24 P PN NAP . . . B 2 21.489 27.338 70.208 1 7.66 ? PN NAP 316 A 1 HETATM 25 O O1N NAP . . . B 2 20.689 26.198 70.67 1 10.35 ? O1N NAP 316 A 1 HETATM 26 O O2N NAP . . . B 2 21.928 27.378 68.811 1 9.61 ? O2N NAP 316 A 1 HETATM 27 O O5D NAP . . . B 2 20.78 28.769 70.462 1 7.95 ? O5D NAP 316 A 1 HETATM 28 C C5D NAP . . . B 2 19.874 29.002 71.559 1 9.3 ? C5D NAP 316 A 1 HETATM 29 C C4D NAP . . . B 2 18.424 28.948 71.097 1 8.07 ? C4D NAP 316 A 1 HETATM 30 O O4D NAP . . . B 2 18.266 29.883 70.023 1 6.59 ? O4D NAP 316 A 1 HETATM 31 C C3D NAP . . . B 2 18.046 27.634 70.45 1 6.51 ? C3D NAP 316 A 1 HETATM 32 O O3D NAP . . . B 2 17.866 26.522 71.316 1 8.63 ? O3D NAP 316 A 1 HETATM 33 C C2D NAP . . . B 2 16.786 28.062 69.752 1 9.54 ? C2D NAP 316 A 1 HETATM 34 O O2D NAP . . . B 2 15.728 28.085 70.708 1 8.73 ? O2D NAP 316 A 1 HETATM 35 C C1D NAP . . . B 2 17.155 29.449 69.242 1 5.41 ? C1D NAP 316 A 1 HETATM 36 N N1N NAP . . . B 2 17.556 29.442 67.83 1 5.02 ? N1N NAP 316 A 1 HETATM 37 C C2N NAP . . . B 2 16.718 29.992 66.864 1 4.82 ? C2N NAP 316 A 1 HETATM 38 C C3N NAP . . . B 2 17.049 29.897 65.516 1 7.7 ? C3N NAP 316 A 1 HETATM 39 C C7N NAP . . . B 2 16.171 30.58 64.463 1 9.86 ? C7N NAP 316 A 1 HETATM 40 O O7N NAP . . . B 2 16.391 30.422 63.26 1 10.69 ? O7N NAP 316 A 1 HETATM 41 N N7N NAP . . . B 2 15.223 31.379 64.94 1 10.14 ? N7N NAP 316 A 1 HETATM 42 C C4N NAP . . . B 2 18.228 29.262 65.142 1 8.19 ? C4N NAP 316 A 1 HETATM 43 C C5N NAP . . . B 2 19.091 28.73 66.097 1 10.01 ? C5N NAP 316 A 1 HETATM 44 C C6N NAP . . . B 2 18.752 28.817 67.442 1 8.47 ? C6N NAP 316 A 1 HETATM 45 P P2B NAP . . . B 2 23.888 21.576 77.235 1 12.27 ? P2B NAP 316 A 1 HETATM 46 O O1X NAP . . . B 2 22.567 21.776 76.609 1 9.44 ? O1X NAP 316 A 1 HETATM 47 O O2X NAP . . . B 2 24.467 20.243 77.022 1 14.37 ? O2X NAP 316 A 1 HETATM 48 O O3X NAP . . . B 2 24.025 22.108 78.6 1 10.68 ? O3X NAP 316 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 48 #