data_2ISS # _model_server_result.job_id Q7-plfOWDozZyuE_C6sUlw _model_server_result.datetime_utc '2024-11-22 16:15:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2iss # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":302}' # _entry.id 2ISS # _exptl.entry_id 2ISS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ISS _cell.length_a 92.529 _cell.length_b 204.098 _cell.length_c 221.336 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ISS _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 92.529 0 0 3 'crystal symmetry operation' 3_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 92.529 0 221.336 4 'crystal symmetry operation' 4_556 x,-y,-z+1 1 0 0 0 -1 0 0 0 -1 0 0 221.336 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 H N N ? 4 J N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 102 A LYS 82 1_555 G C3 5RP . A 5RP 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 B NZ LYS 102 B LYS 82 1_555 I C3 5RP . B 5RP 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 C NZ LYS 102 C LYS 82 1_555 K C3 5RP . C 5RP 294 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 284 n n P O2 PO4 sing 285 n n P O3 PO4 sing 286 n n P O4 PO4 sing 287 n n # _atom_sites.entry_id 2ISS _atom_sites.fract_transf_matrix[1][1] 0.010807 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0049 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004518 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 5RP A 1 294 282 5RP 5RP . H 4 PO4 A 1 300 300 PO4 PO4 . I 3 5RP B 1 294 282 5RP 5RP . J 4 PO4 B 1 301 301 PO4 PO4 . K 3 5RP C 1 294 282 5RP 5RP . L 4 PO4 C 1 302 302 PO4 PO4 . M 5 HOH A 1 351 351 HOH HOH . M 5 HOH A 2 353 353 HOH HOH . M 5 HOH A 3 354 354 HOH HOH . M 5 HOH A 4 359 359 HOH HOH . M 5 HOH A 5 364 364 HOH HOH . M 5 HOH A 6 366 366 HOH HOH . M 5 HOH A 7 380 380 HOH HOH . M 5 HOH A 8 386 386 HOH HOH . N 5 HOH B 1 352 352 HOH HOH . N 5 HOH B 2 361 361 HOH HOH . N 5 HOH B 3 368 368 HOH HOH . N 5 HOH B 4 369 369 HOH HOH . N 5 HOH B 5 371 371 HOH HOH . N 5 HOH B 6 374 374 HOH HOH . N 5 HOH B 7 375 375 HOH HOH . N 5 HOH B 8 376 376 HOH HOH . N 5 HOH B 9 377 377 HOH HOH . N 5 HOH B 10 378 378 HOH HOH . N 5 HOH B 11 379 379 HOH HOH . N 5 HOH B 12 381 381 HOH HOH . N 5 HOH B 13 385 385 HOH HOH . N 5 HOH B 14 387 387 HOH HOH . O 5 HOH C 1 350 350 HOH HOH . O 5 HOH C 2 355 355 HOH HOH . O 5 HOH C 3 357 357 HOH HOH . O 5 HOH C 4 360 360 HOH HOH . O 5 HOH C 5 365 365 HOH HOH . O 5 HOH C 6 370 370 HOH HOH . O 5 HOH C 7 372 372 HOH HOH . O 5 HOH C 8 382 382 HOH HOH . O 5 HOH C 9 383 383 HOH HOH . P 5 HOH D 1 356 356 HOH HOH . P 5 HOH D 2 363 363 HOH HOH . P 5 HOH D 3 384 384 HOH HOH . Q 5 HOH E 1 358 358 HOH HOH . Q 5 HOH E 2 362 362 HOH HOH . Q 5 HOH E 3 367 367 HOH HOH . R 5 HOH F 1 373 373 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . L 4 56.662 26.103 127.21 1 58.11 ? P PO4 302 C 1 HETATM 2 O O1 PO4 . . . L 4 58.136 26.03 127.372 1 59.14 ? O1 PO4 302 C 1 HETATM 3 O O2 PO4 . . . L 4 56.11 27.113 128.154 1 58.05 ? O2 PO4 302 C 1 HETATM 4 O O3 PO4 . . . L 4 56.336 26.494 125.81 1 56.34 ? O3 PO4 302 C 1 HETATM 5 O O4 PO4 . . . L 4 56.069 24.774 127.507 1 57.93 ? O4 PO4 302 C 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #