data_2IVV
#
_model_server_result.job_id            VTTPN2_V4Ef6RrjSBbXyLQ 
_model_server_result.datetime_utc      '2024-11-24 19:47:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ivv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":3014}' 
#
_entry.id    2IVV 
#
_exptl.entry_id    2IVV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              281.356 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          101.79 
_cell.angle_gamma         90 
_cell.entry_id            2IVV 
_cell.length_a            71.641 
_cell.length_b            70.955 
_cell.length_c            78.685 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2IVV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 71.641 0 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C SER 205 A SER 904 1_555 A N PTR 206 A PTR 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? 
covale ? covale2 A C PTR 206 A PTR 905 1_555 A N VAL 207 A VAL 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? 
#
_chem_comp.formula           'C16 H19 N5' 
_chem_comp.formula_weight    281.356 
_chem_comp.id                PP1 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C4 PP1 sing 264 n y 
N1 N8 PP1 sing 265 n y 
N1 C28 PP1 sing 266 n n 
C2 N3 PP1 doub 267 n y 
C2 N7 PP1 sing 268 n y 
C2 HC2 PP1 sing 269 n n 
N3 C4 PP1 sing 270 n y 
C4 C5 PP1 doub 271 n y 
C5 C6 PP1 sing 272 n y 
C5 C9 PP1 sing 273 n y 
C6 N7 PP1 doub 274 n y 
C6 N10 PP1 sing 275 n n 
N8 C9 PP1 doub 276 n y 
C9 C11 PP1 sing 277 n y 
N10 H101 PP1 sing 278 n n 
N10 H102 PP1 sing 279 n n 
C11 C12 PP1 doub 280 n y 
C11 C16 PP1 sing 281 n y 
C12 C13 PP1 sing 282 n y 
C12 HC12 PP1 sing 283 n n 
C13 C14 PP1 doub 284 n y 
C13 HC13 PP1 sing 285 n n 
C14 C15 PP1 sing 286 n y 
C14 C24 PP1 sing 287 n n 
C15 C16 PP1 doub 288 n y 
C15 HC15 PP1 sing 289 n n 
C16 HC16 PP1 sing 290 n n 
C24 H241 PP1 sing 291 n n 
C24 H242 PP1 sing 292 n n 
C24 H243 PP1 sing 293 n n 
C28 C29 PP1 sing 294 n n 
C28 C33 PP1 sing 295 n n 
C28 C37 PP1 sing 296 n n 
C29 H291 PP1 sing 297 n n 
C29 H292 PP1 sing 298 n n 
C29 H293 PP1 sing 299 n n 
C33 H331 PP1 sing 300 n n 
C33 H332 PP1 sing 301 n n 
C33 H333 PP1 sing 302 n n 
C37 H371 PP1 sing 303 n n 
C37 H372 PP1 sing 304 n n 
C37 H373 PP1 sing 305 n n 
#
_atom_sites.entry_id                     2IVV 
_atom_sites.fract_transf_matrix[1][1]    0.013958 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002914 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014093 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012983 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FMT A 1 3012 3012 FMT FMT . 
C 2 FMT A 1 3013 3013 FMT FMT . 
D 3 PP1 A 1 3014 3014 PP1 PP1 . 
E 4 HOH A 1 2001 2001 HOH HOH . 
E 4 HOH A 2 2002 2002 HOH HOH . 
E 4 HOH A 3 2003 2003 HOH HOH . 
E 4 HOH A 4 2004 2004 HOH HOH . 
E 4 HOH A 5 2005 2005 HOH HOH . 
E 4 HOH A 6 2006 2006 HOH HOH . 
E 4 HOH A 7 2007 2007 HOH HOH . 
E 4 HOH A 8 2008 2008 HOH HOH . 
E 4 HOH A 9 2009 2009 HOH HOH . 
E 4 HOH A 10 2010 2010 HOH HOH . 
E 4 HOH A 11 2011 2011 HOH HOH . 
E 4 HOH A 12 2012 2012 HOH HOH . 
E 4 HOH A 13 2013 2013 HOH HOH . 
E 4 HOH A 14 2014 2014 HOH HOH . 
E 4 HOH A 15 2015 2015 HOH HOH . 
E 4 HOH A 16 2016 2016 HOH HOH . 
E 4 HOH A 17 2017 2017 HOH HOH . 
E 4 HOH A 18 2018 2018 HOH HOH . 
E 4 HOH A 19 2019 2019 HOH HOH . 
E 4 HOH A 20 2020 2020 HOH HOH . 
E 4 HOH A 21 2021 2021 HOH HOH . 
E 4 HOH A 22 2022 2022 HOH HOH . 
E 4 HOH A 23 2023 2023 HOH HOH . 
E 4 HOH A 24 2024 2024 HOH HOH . 
E 4 HOH A 25 2025 2025 HOH HOH . 
E 4 HOH A 26 2026 2026 HOH HOH . 
E 4 HOH A 27 2027 2027 HOH HOH . 
E 4 HOH A 28 2028 2028 HOH HOH . 
E 4 HOH A 29 2029 2029 HOH HOH . 
E 4 HOH A 30 2030 2030 HOH HOH . 
E 4 HOH A 31 2031 2031 HOH HOH . 
E 4 HOH A 32 2032 2032 HOH HOH . 
E 4 HOH A 33 2033 2033 HOH HOH . 
E 4 HOH A 34 2034 2034 HOH HOH . 
E 4 HOH A 35 2035 2035 HOH HOH . 
E 4 HOH A 36 2036 2036 HOH HOH . 
E 4 HOH A 37 2037 2037 HOH HOH . 
E 4 HOH A 38 2038 2038 HOH HOH . 
E 4 HOH A 39 2039 2039 HOH HOH . 
E 4 HOH A 40 2040 2040 HOH HOH . 
E 4 HOH A 41 2041 2041 HOH HOH . 
E 4 HOH A 42 2042 2042 HOH HOH . 
E 4 HOH A 43 2043 2043 HOH HOH . 
E 4 HOH A 44 2044 2044 HOH HOH . 
E 4 HOH A 45 2045 2045 HOH HOH . 
E 4 HOH A 46 2046 2046 HOH HOH . 
E 4 HOH A 47 2047 2047 HOH HOH . 
E 4 HOH A 48 2048 2048 HOH HOH . 
E 4 HOH A 49 2049 2049 HOH HOH . 
E 4 HOH A 50 2050 2050 HOH HOH . 
E 4 HOH A 51 2051 2051 HOH HOH . 
E 4 HOH A 52 2052 2052 HOH HOH . 
E 4 HOH A 53 2053 2053 HOH HOH . 
E 4 HOH A 54 2054 2054 HOH HOH . 
E 4 HOH A 55 2055 2055 HOH HOH . 
E 4 HOH A 56 2056 2056 HOH HOH . 
E 4 HOH A 57 2057 2057 HOH HOH . 
E 4 HOH A 58 2058 2058 HOH HOH . 
E 4 HOH A 59 2059 2059 HOH HOH . 
E 4 HOH A 60 2060 2060 HOH HOH . 
E 4 HOH A 61 2061 2061 HOH HOH . 
E 4 HOH A 62 2062 2062 HOH HOH . 
E 4 HOH A 63 2063 2063 HOH HOH . 
E 4 HOH A 64 2064 2064 HOH HOH . 
E 4 HOH A 65 2065 2065 HOH HOH . 
E 4 HOH A 66 2066 2066 HOH HOH . 
E 4 HOH A 67 2067 2067 HOH HOH . 
E 4 HOH A 68 2068 2068 HOH HOH . 
E 4 HOH A 69 2069 2069 HOH HOH . 
E 4 HOH A 70 2070 2070 HOH HOH . 
E 4 HOH A 71 2071 2071 HOH HOH . 
E 4 HOH A 72 2072 2072 HOH HOH . 
E 4 HOH A 73 2073 2073 HOH HOH . 
E 4 HOH A 74 2074 2074 HOH HOH . 
E 4 HOH A 75 2075 2075 HOH HOH . 
E 4 HOH A 76 2076 2076 HOH HOH . 
E 4 HOH A 77 2077 2077 HOH HOH . 
E 4 HOH A 78 2078 2078 HOH HOH . 
E 4 HOH A 79 2079 2079 HOH HOH . 
E 4 HOH A 80 2080 2080 HOH HOH . 
E 4 HOH A 81 2081 2081 HOH HOH . 
E 4 HOH A 82 2082 2082 HOH HOH . 
E 4 HOH A 83 2083 2083 HOH HOH . 
E 4 HOH A 84 2084 2084 HOH HOH . 
E 4 HOH A 85 2085 2085 HOH HOH . 
E 4 HOH A 86 2086 2086 HOH HOH . 
E 4 HOH A 87 2087 2087 HOH HOH . 
E 4 HOH A 88 2088 2088 HOH HOH . 
E 4 HOH A 89 2089 2089 HOH HOH . 
E 4 HOH A 90 2090 2090 HOH HOH . 
E 4 HOH A 91 2091 2091 HOH HOH . 
E 4 HOH A 92 2092 2092 HOH HOH . 
E 4 HOH A 93 2093 2093 HOH HOH . 
E 4 HOH A 94 2094 2094 HOH HOH . 
E 4 HOH A 95 2095 2095 HOH HOH . 
E 4 HOH A 96 2096 2096 HOH HOH . 
E 4 HOH A 97 2097 2097 HOH HOH . 
E 4 HOH A 98 2098 2098 HOH HOH . 
E 4 HOH A 99 2099 2099 HOH HOH . 
E 4 HOH A 100 2100 2100 HOH HOH . 
E 4 HOH A 101 2101 2101 HOH HOH . 
E 4 HOH A 102 2102 2102 HOH HOH . 
E 4 HOH A 103 2103 2103 HOH HOH . 
E 4 HOH A 104 2104 2104 HOH HOH . 
E 4 HOH A 105 2105 2105 HOH HOH . 
E 4 HOH A 106 2106 2106 HOH HOH . 
E 4 HOH A 107 2107 2107 HOH HOH . 
E 4 HOH A 108 2108 2108 HOH HOH . 
E 4 HOH A 109 2109 2109 HOH HOH . 
E 4 HOH A 110 2110 2110 HOH HOH . 
E 4 HOH A 111 2111 2111 HOH HOH . 
E 4 HOH A 112 2112 2112 HOH HOH . 
E 4 HOH A 113 2113 2113 HOH HOH . 
E 4 HOH A 114 2114 2114 HOH HOH . 
E 4 HOH A 115 2115 2115 HOH HOH . 
E 4 HOH A 116 2116 2116 HOH HOH . 
E 4 HOH A 117 2117 2117 HOH HOH . 
E 4 HOH A 118 2118 2118 HOH HOH . 
E 4 HOH A 119 2119 2119 HOH HOH . 
E 4 HOH A 120 2120 2120 HOH HOH . 
E 4 HOH A 121 2121 2121 HOH HOH . 
E 4 HOH A 122 2122 2122 HOH HOH . 
E 4 HOH A 123 2123 2123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 PP1 . . . D 3 25.85 8.239 10.209 1 35.55 ? N1 PP1 3014 A 1 
HETATM 2 C C2 PP1 . . . D 3 23.511 10.296 12.065 1 35.27 ? C2 PP1 3014 A 1 
HETATM 3 N N3 PP1 . . . D 3 24.656 10.017 11.468 1 34.68 ? N3 PP1 3014 A 1 
HETATM 4 C C4 PP1 . . . D 3 24.817 8.815 10.853 1 35.81 ? C4 PP1 3014 A 1 
HETATM 5 C C5 PP1 . . . D 3 23.774 7.879 10.847 1 33.98 ? C5 PP1 3014 A 1 
HETATM 6 C C6 PP1 . . . D 3 22.576 8.229 11.51 1 33.21 ? C6 PP1 3014 A 1 
HETATM 7 N N7 PP1 . . . D 3 22.493 9.427 12.085 1 33.92 ? N7 PP1 3014 A 1 
HETATM 8 N N8 PP1 . . . D 3 25.555 7.111 9.782 1 34.88 ? N8 PP1 3014 A 1 
HETATM 9 C C9 PP1 . . . D 3 24.309 6.78 10.144 1 33.03 ? C9 PP1 3014 A 1 
HETATM 10 N N10 PP1 . . . D 3 21.516 7.432 11.605 1 33.26 ? N10 PP1 3014 A 1 
HETATM 11 C C11 PP1 . . . D 3 23.67 5.588 9.768 1 32.06 ? C11 PP1 3014 A 1 
HETATM 12 C C12 PP1 . . . D 3 24.189 4.341 10.027 1 28.73 ? C12 PP1 3014 A 1 
HETATM 13 C C13 PP1 . . . D 3 23.516 3.203 9.577 1 31.9 ? C13 PP1 3014 A 1 
HETATM 14 C C14 PP1 . . . D 3 22.355 3.308 8.803 1 31.91 ? C14 PP1 3014 A 1 
HETATM 15 C C15 PP1 . . . D 3 21.847 4.579 8.491 1 28.63 ? C15 PP1 3014 A 1 
HETATM 16 C C16 PP1 . . . D 3 22.521 5.703 8.972 1 29.22 ? C16 PP1 3014 A 1 
HETATM 17 C C24 PP1 . . . D 3 21.642 2.023 8.305 1 31.44 ? C24 PP1 3014 A 1 
HETATM 18 C C28 PP1 . . . D 3 27.201 8.878 9.954 1 36.35 ? C28 PP1 3014 A 1 
HETATM 19 C C29 PP1 . . . D 3 27.759 9.486 11.259 1 37.59 ? C29 PP1 3014 A 1 
HETATM 20 C C33 PP1 . . . D 3 28.161 7.746 9.482 1 38.92 ? C33 PP1 3014 A 1 
HETATM 21 C C37 PP1 . . . D 3 27.066 9.975 8.894 1 33.39 ? C37 PP1 3014 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           344 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           21 
#