data_2IW5 # _model_server_result.job_id KTbYb-vYW893kckQJ56RGA _model_server_result.datetime_utc '2024-10-31 07:20:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2iw5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":900}' # _entry.id 2IW5 # _exptl.entry_id 2IW5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IW5 _cell.length_a 120.354 _cell.length_b 178.222 _cell.length_c 234.932 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IW5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2IW5 _atom_sites.fract_transf_matrix[1][1] 0.008309 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005611 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004257 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FAD A 1 900 900 FAD FAD . D 4 CL A 1 1838 1838 CL CL . E 5 GOL A 1 1839 1839 GOL GOL . F 5 GOL A 1 1840 1840 GOL GOL . G 4 CL A 1 1841 1841 CL CL . H 6 NH4 A 1 1842 1842 NH4 NH4 . I 4 CL A 1 1843 1843 CL CL . J 7 HOH A 1 2001 2001 HOH HOH . J 7 HOH A 2 2002 2002 HOH HOH . J 7 HOH A 3 2003 2003 HOH HOH . J 7 HOH A 4 2004 2004 HOH HOH . J 7 HOH A 5 2005 2005 HOH HOH . J 7 HOH A 6 2006 2006 HOH HOH . J 7 HOH A 7 2007 2007 HOH HOH . J 7 HOH A 8 2008 2008 HOH HOH . J 7 HOH A 9 2009 2009 HOH HOH . J 7 HOH A 10 2010 2010 HOH HOH . J 7 HOH A 11 2011 2011 HOH HOH . J 7 HOH A 12 2012 2012 HOH HOH . J 7 HOH A 13 2013 2013 HOH HOH . J 7 HOH A 14 2014 2014 HOH HOH . J 7 HOH A 15 2015 2015 HOH HOH . J 7 HOH A 16 2016 2016 HOH HOH . J 7 HOH A 17 2017 2017 HOH HOH . J 7 HOH A 18 2018 2018 HOH HOH . J 7 HOH A 19 2019 2019 HOH HOH . J 7 HOH A 20 2020 2020 HOH HOH . J 7 HOH A 21 2021 2021 HOH HOH . J 7 HOH A 22 2022 2022 HOH HOH . J 7 HOH A 23 2023 2023 HOH HOH . J 7 HOH A 24 2024 2024 HOH HOH . J 7 HOH A 25 2025 2025 HOH HOH . J 7 HOH A 26 2026 2026 HOH HOH . J 7 HOH A 27 2027 2027 HOH HOH . J 7 HOH A 28 2028 2028 HOH HOH . J 7 HOH A 29 2029 2029 HOH HOH . J 7 HOH A 30 2030 2030 HOH HOH . J 7 HOH A 31 2031 2031 HOH HOH . J 7 HOH A 32 2032 2032 HOH HOH . J 7 HOH A 33 2033 2033 HOH HOH . J 7 HOH A 34 2034 2034 HOH HOH . J 7 HOH A 35 2035 2035 HOH HOH . J 7 HOH A 36 2036 2036 HOH HOH . J 7 HOH A 37 2037 2037 HOH HOH . J 7 HOH A 38 2038 2038 HOH HOH . J 7 HOH A 39 2039 2039 HOH HOH . J 7 HOH A 40 2040 2040 HOH HOH . J 7 HOH A 41 2041 2041 HOH HOH . J 7 HOH A 42 2042 2042 HOH HOH . J 7 HOH A 43 2043 2043 HOH HOH . J 7 HOH A 44 2044 2044 HOH HOH . J 7 HOH A 45 2045 2045 HOH HOH . J 7 HOH A 46 2046 2046 HOH HOH . J 7 HOH A 47 2047 2047 HOH HOH . J 7 HOH A 48 2048 2048 HOH HOH . J 7 HOH A 49 2049 2049 HOH HOH . J 7 HOH A 50 2050 2050 HOH HOH . J 7 HOH A 51 2051 2051 HOH HOH . J 7 HOH A 52 2052 2052 HOH HOH . J 7 HOH A 53 2053 2053 HOH HOH . J 7 HOH A 54 2054 2054 HOH HOH . J 7 HOH A 55 2055 2055 HOH HOH . J 7 HOH A 56 2056 2056 HOH HOH . J 7 HOH A 57 2057 2057 HOH HOH . J 7 HOH A 58 2058 2058 HOH HOH . J 7 HOH A 59 2059 2059 HOH HOH . J 7 HOH A 60 2060 2060 HOH HOH . J 7 HOH A 61 2061 2061 HOH HOH . J 7 HOH A 62 2062 2062 HOH HOH . J 7 HOH A 63 2063 2063 HOH HOH . J 7 HOH A 64 2064 2064 HOH HOH . J 7 HOH A 65 2065 2065 HOH HOH . J 7 HOH A 66 2066 2066 HOH HOH . J 7 HOH A 67 2067 2067 HOH HOH . J 7 HOH A 68 2068 2068 HOH HOH . J 7 HOH A 69 2069 2069 HOH HOH . J 7 HOH A 70 2070 2070 HOH HOH . J 7 HOH A 71 2071 2071 HOH HOH . J 7 HOH A 72 2072 2072 HOH HOH . J 7 HOH A 73 2073 2073 HOH HOH . J 7 HOH A 74 2074 2074 HOH HOH . J 7 HOH A 75 2075 2075 HOH HOH . J 7 HOH A 76 2076 2076 HOH HOH . J 7 HOH A 77 2077 2077 HOH HOH . K 7 HOH B 1 2001 2001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . C 3 66.833 67.254 28.643 1 40.36 ? PA FAD 900 A 1 HETATM 2 O O1A FAD . . . C 3 65.873 67.61 29.739 1 38.54 ? O1A FAD 900 A 1 HETATM 3 O O2A FAD . . . C 3 68.148 66.672 29.1 1 40.84 ? O2A FAD 900 A 1 HETATM 4 O O5B FAD . . . C 3 67.066 68.51 27.644 1 41.9 ? O5B FAD 900 A 1 HETATM 5 C C5B FAD . . . C 3 66.137 69.582 27.603 1 41.69 ? C5B FAD 900 A 1 HETATM 6 C C4B FAD . . . C 3 66.897 70.886 27.835 1 42.64 ? C4B FAD 900 A 1 HETATM 7 O O4B FAD . . . C 3 66.094 72.024 27.557 1 42.59 ? O4B FAD 900 A 1 HETATM 8 C C3B FAD . . . C 3 67.365 71.028 29.274 1 40.47 ? C3B FAD 900 A 1 HETATM 9 O O3B FAD . . . C 3 68.722 71.36 29.217 1 41.32 ? O3B FAD 900 A 1 HETATM 10 C C2B FAD . . . C 3 66.577 72.203 29.816 1 40.76 ? C2B FAD 900 A 1 HETATM 11 O O2B FAD . . . C 3 67.271 72.952 30.795 1 39.07 ? O2B FAD 900 A 1 HETATM 12 C C1B FAD . . . C 3 66.342 72.994 28.547 1 40.93 ? C1B FAD 900 A 1 HETATM 13 N N9A FAD . . . C 3 65.178 73.861 28.669 1 40.43 ? N9A FAD 900 A 1 HETATM 14 C C8A FAD . . . C 3 64.025 73.643 29.367 1 39.61 ? C8A FAD 900 A 1 HETATM 15 N N7A FAD . . . C 3 63.235 74.727 29.176 1 40.12 ? N7A FAD 900 A 1 HETATM 16 C C5A FAD . . . C 3 63.891 75.617 28.366 1 40.54 ? C5A FAD 900 A 1 HETATM 17 C C6A FAD . . . C 3 63.577 76.874 27.838 1 39.59 ? C6A FAD 900 A 1 HETATM 18 N N6A FAD . . . C 3 62.458 77.524 28.147 1 38.82 ? N6A FAD 900 A 1 HETATM 19 N N1A FAD . . . C 3 64.481 77.511 27.038 1 40.69 ? N1A FAD 900 A 1 HETATM 20 C C2A FAD . . . C 3 65.704 76.942 26.723 1 40.98 ? C2A FAD 900 A 1 HETATM 21 N N3A FAD . . . C 3 66.004 75.707 27.252 1 42.88 ? N3A FAD 900 A 1 HETATM 22 C C4A FAD . . . C 3 65.116 75.071 28.059 1 40.2 ? C4A FAD 900 A 1 HETATM 23 N N1 FAD . . . C 3 68.371 57.669 31.594 1 46.34 ? N1 FAD 900 A 1 HETATM 24 C C2 FAD . . . C 3 69.268 56.626 31.464 1 45.67 ? C2 FAD 900 A 1 HETATM 25 O O2 FAD . . . C 3 69.658 56.247 30.346 1 45.75 ? O2 FAD 900 A 1 HETATM 26 N N3 FAD . . . C 3 69.704 55.996 32.608 1 45.76 ? N3 FAD 900 A 1 HETATM 27 C C4 FAD . . . C 3 69.26 56.412 33.843 1 46.53 ? C4 FAD 900 A 1 HETATM 28 O O4 FAD . . . C 3 69.679 55.863 34.858 1 47.57 ? O4 FAD 900 A 1 HETATM 29 C C4X FAD . . . C 3 68.354 57.45 33.968 1 46.18 ? C4X FAD 900 A 1 HETATM 30 N N5 FAD . . . C 3 67.891 57.839 35.214 1 45.79 ? N5 FAD 900 A 1 HETATM 31 C C5X FAD . . . C 3 67.343 59.087 35.346 1 45.96 ? C5X FAD 900 A 1 HETATM 32 C C6 FAD . . . C 3 67.259 59.643 36.61 1 45.6 ? C6 FAD 900 A 1 HETATM 33 C C7 FAD . . . C 3 66.739 60.925 36.765 1 46.61 ? C7 FAD 900 A 1 HETATM 34 C C7M FAD . . . C 3 66.662 61.492 38.165 1 45.49 ? C7M FAD 900 A 1 HETATM 35 C C8 FAD . . . C 3 66.31 61.65 35.627 1 46.06 ? C8 FAD 900 A 1 HETATM 36 C C8M FAD . . . C 3 65.743 63.041 35.761 1 45.17 ? C8M FAD 900 A 1 HETATM 37 C C9 FAD . . . C 3 66.383 61.065 34.36 1 45.39 ? C9 FAD 900 A 1 HETATM 38 C C9A FAD . . . C 3 66.915 59.781 34.204 1 46.08 ? C9A FAD 900 A 1 HETATM 39 N N10 FAD . . . C 3 67.018 59.155 32.96 1 45.52 ? N10 FAD 900 A 1 HETATM 40 C C10 FAD . . . C 3 67.91 58.097 32.829 1 45.72 ? C10 FAD 900 A 1 HETATM 41 C C1' FAD . . . C 3 66.53 59.842 31.723 1 45.79 ? C1' FAD 900 A 1 HETATM 42 C C2' FAD . . . C 3 67.531 60.762 31.053 1 43.81 ? C2' FAD 900 A 1 HETATM 43 O O2' FAD . . . C 3 67.974 61.669 32.011 1 44.29 ? O2' FAD 900 A 1 HETATM 44 C C3' FAD . . . C 3 66.785 61.578 30.024 1 44.47 ? C3' FAD 900 A 1 HETATM 45 O O3' FAD . . . C 3 65.958 60.747 29.254 1 43.05 ? O3' FAD 900 A 1 HETATM 46 C C4' FAD . . . C 3 67.679 62.4 29.094 1 44.91 ? C4' FAD 900 A 1 HETATM 47 O O4' FAD . . . C 3 68.833 62.904 29.733 1 44.56 ? O4' FAD 900 A 1 HETATM 48 C C5' FAD . . . C 3 66.855 63.594 28.686 1 44.45 ? C5' FAD 900 A 1 HETATM 49 O O5' FAD . . . C 3 67.351 64.057 27.458 1 44.73 ? O5' FAD 900 A 1 HETATM 50 P P FAD . . . C 3 66.622 65.258 26.685 1 41.39 ? P FAD 900 A 1 HETATM 51 O O1P FAD . . . C 3 67.72 65.851 25.836 1 43.3 ? O1P FAD 900 A 1 HETATM 52 O O2P FAD . . . C 3 65.385 64.772 25.96 1 39.28 ? O2P FAD 900 A 1 HETATM 53 O O3P FAD . . . C 3 65.995 66.245 27.752 1 40.62 ? O3P FAD 900 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #