data_2IW6 # _model_server_result.job_id fYCh6riU3S8UKzxwfKAbfQ _model_server_result.datetime_utc '2024-11-04 20:29:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2iw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1296}' # _entry.id 2IW6 # _exptl.entry_id 2IW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 466.963 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2-CHLORO-5-METHYLPHENYL){6-[(4-{[(2R)-3-(DIMETHYLAMINO)-2-HYDROXYPROPYL]OXY}PHENYL)AMINO]PYRIMIDIN-4-YL}AMINO]ACETONITRILE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IW6 _cell.length_a 73.777 _cell.length_b 134.557 _cell.length_c 148.265 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,J,K 1 1 C,D,H,I,L,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TYR 163 A TYR 159 1_555 A N TPO 164 A TPO 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C TPO 164 A TPO 160 1_555 A N HIS 165 A HIS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale3 B SG CYS 21 B CYS 193 1_555 F S1 SGM . B SGM 1433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? covale ? covale4 C C TYR 163 C TYR 159 1_555 C N TPO 164 C TPO 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale5 C C TPO 164 C TPO 160 1_555 C N HIS 165 C HIS 161 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? metalc ? metalc1 B O MET 28 B MET 200 1_555 G MG MG . B MG 1434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.584 ? metalc ? metalc2 B O GLN 31 B GLN 203 1_555 G MG MG . B MG 1434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc3 B O ILE 34 B ILE 206 1_555 G MG MG . B MG 1434 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.635 ? # _chem_comp.formula 'C24 H27 Cl N6 O2' _chem_comp.formula_weight 466.963 _chem_comp.id QQ2 _chem_comp.mon_nstd_flag . _chem_comp.name '[(2-CHLORO-5-METHYLPHENYL){6-[(4-{[(2R)-3-(DIMETHYLAMINO)-2-HYDROXYPROPYL]OXY}PHENYL)AMINO]PYRIMIDIN-4-YL}AMINO]ACETONITRILE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C21 QQ2 doub 277 n y C22 C23 QQ2 sing 278 n y C22 H22 QQ2 sing 279 n n C1 N2 QQ2 doub 280 n y C1 N6 QQ2 sing 281 n y C1 H1 QQ2 sing 282 n n C5 C4 QQ2 sing 283 n y C5 N6 QQ2 doub 284 n y C5 N19 QQ2 sing 285 n n C4 C3 QQ2 doub 286 n y C4 H4 QQ2 sing 287 n n C3 N2 QQ2 sing 288 n y C3 N7 QQ2 sing 289 n n C11 C10 QQ2 doub 290 n y C11 C12 QQ2 sing 291 n y C11 H11 QQ2 sing 292 n n C10 C9 QQ2 sing 293 n y C10 C33 QQ2 sing 294 n n C9 C8 QQ2 doub 295 n y C9 H9 QQ2 sing 296 n n C8 C13 QQ2 sing 297 n y C8 N7 QQ2 sing 298 n n C12 C13 QQ2 doub 299 n y C12 H12 QQ2 sing 300 n n C17 C16 QQ2 sing 301 n n C17 N18 QQ2 trip 302 n n C16 N7 QQ2 sing 303 n n C16 H161 QQ2 sing 304 n n C16 H162 QQ2 sing 305 n n C13 CL1 QQ2 sing 306 n n C20 N19 QQ2 sing 307 n n C20 C21 QQ2 sing 308 n y C20 C25 QQ2 doub 309 n y N19 H19 QQ2 sing 310 n n C21 H21 QQ2 sing 311 n n C23 C24 QQ2 doub 312 n y C23 O26 QQ2 sing 313 n n C24 C25 QQ2 sing 314 n y C24 H24 QQ2 sing 315 n n C25 H25 QQ2 sing 316 n n O26 C27 QQ2 sing 317 n n C27 C28 QQ2 sing 318 n n C27 H271 QQ2 sing 319 n n C27 H272 QQ2 sing 320 n n C28 C29 QQ2 sing 321 n n C28 O33 QQ2 sing 322 n n C28 H28 QQ2 sing 323 n n C29 N30 QQ2 sing 324 n n C29 H291 QQ2 sing 325 n n C29 H292 QQ2 sing 326 n n N30 C31 QQ2 sing 327 n n N30 C32 QQ2 sing 328 n n C31 H311 QQ2 sing 329 n n C31 H312 QQ2 sing 330 n n C31 H313 QQ2 sing 331 n n C32 H321 QQ2 sing 332 n n C32 H322 QQ2 sing 333 n n C32 H323 QQ2 sing 334 n n O33 H33 QQ2 sing 335 n n C33 H331 QQ2 sing 336 n n C33 H332 QQ2 sing 337 n n C33 H333 QQ2 sing 338 n n # _atom_sites.entry_id 2IW6 _atom_sites.fract_transf_matrix[1][1] 0.013554 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007432 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006745 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 QQ2 A 1 1296 1296 QQ2 QQ2 . F 4 SGM B 1 1433 1433 SGM SGM . G 5 MG B 1 1434 1434 MG MG . H 3 QQ2 C 1 1296 1296 QQ2 QQ2 . I 4 SGM D 1 1433 1433 SGM SGM . J 6 HOH A 1 2001 2001 HOH HOH . J 6 HOH A 2 2002 2002 HOH HOH . J 6 HOH A 3 2003 2003 HOH HOH . J 6 HOH A 4 2004 2004 HOH HOH . J 6 HOH A 5 2005 2005 HOH HOH . J 6 HOH A 6 2006 2006 HOH HOH . J 6 HOH A 7 2007 2007 HOH HOH . J 6 HOH A 8 2008 2008 HOH HOH . J 6 HOH A 9 2009 2009 HOH HOH . J 6 HOH A 10 2010 2010 HOH HOH . J 6 HOH A 11 2011 2011 HOH HOH . J 6 HOH A 12 2012 2012 HOH HOH . J 6 HOH A 13 2013 2013 HOH HOH . J 6 HOH A 14 2014 2014 HOH HOH . J 6 HOH A 15 2015 2015 HOH HOH . J 6 HOH A 16 2016 2016 HOH HOH . J 6 HOH A 17 2017 2017 HOH HOH . J 6 HOH A 18 2018 2018 HOH HOH . J 6 HOH A 19 2019 2019 HOH HOH . J 6 HOH A 20 2020 2020 HOH HOH . J 6 HOH A 21 2021 2021 HOH HOH . J 6 HOH A 22 2022 2022 HOH HOH . J 6 HOH A 23 2023 2023 HOH HOH . J 6 HOH A 24 2024 2024 HOH HOH . J 6 HOH A 25 2025 2025 HOH HOH . J 6 HOH A 26 2026 2026 HOH HOH . J 6 HOH A 27 2027 2027 HOH HOH . J 6 HOH A 28 2028 2028 HOH HOH . J 6 HOH A 29 2029 2029 HOH HOH . J 6 HOH A 30 2030 2030 HOH HOH . J 6 HOH A 31 2031 2031 HOH HOH . J 6 HOH A 32 2032 2032 HOH HOH . J 6 HOH A 33 2033 2033 HOH HOH . J 6 HOH A 34 2034 2034 HOH HOH . J 6 HOH A 35 2035 2035 HOH HOH . J 6 HOH A 36 2036 2036 HOH HOH . J 6 HOH A 37 2037 2037 HOH HOH . J 6 HOH A 38 2038 2038 HOH HOH . J 6 HOH A 39 2039 2039 HOH HOH . J 6 HOH A 40 2040 2040 HOH HOH . J 6 HOH A 41 2041 2041 HOH HOH . J 6 HOH A 42 2042 2042 HOH HOH . J 6 HOH A 43 2043 2043 HOH HOH . J 6 HOH A 44 2044 2044 HOH HOH . J 6 HOH A 45 2045 2045 HOH HOH . J 6 HOH A 46 2046 2046 HOH HOH . J 6 HOH A 47 2047 2047 HOH HOH . J 6 HOH A 48 2048 2048 HOH HOH . K 6 HOH B 1 2001 2001 HOH HOH . K 6 HOH B 2 2002 2002 HOH HOH . K 6 HOH B 3 2003 2003 HOH HOH . K 6 HOH B 4 2004 2004 HOH HOH . K 6 HOH B 5 2005 2005 HOH HOH . K 6 HOH B 6 2006 2006 HOH HOH . K 6 HOH B 7 2007 2007 HOH HOH . K 6 HOH B 8 2008 2008 HOH HOH . K 6 HOH B 9 2009 2009 HOH HOH . K 6 HOH B 10 2010 2010 HOH HOH . K 6 HOH B 11 2011 2011 HOH HOH . K 6 HOH B 12 2012 2012 HOH HOH . K 6 HOH B 13 2013 2013 HOH HOH . K 6 HOH B 14 2014 2014 HOH HOH . K 6 HOH B 15 2015 2015 HOH HOH . K 6 HOH B 16 2016 2016 HOH HOH . K 6 HOH B 17 2017 2017 HOH HOH . K 6 HOH B 18 2018 2018 HOH HOH . K 6 HOH B 19 2019 2019 HOH HOH . K 6 HOH B 20 2020 2020 HOH HOH . K 6 HOH B 21 2021 2021 HOH HOH . K 6 HOH B 22 2022 2022 HOH HOH . K 6 HOH B 23 2023 2023 HOH HOH . K 6 HOH B 24 2024 2024 HOH HOH . K 6 HOH B 25 2025 2025 HOH HOH . K 6 HOH B 26 2026 2026 HOH HOH . K 6 HOH B 27 2027 2027 HOH HOH . K 6 HOH B 28 2028 2028 HOH HOH . K 6 HOH B 29 2029 2029 HOH HOH . K 6 HOH B 30 2030 2030 HOH HOH . K 6 HOH B 31 2031 2031 HOH HOH . K 6 HOH B 32 2032 2032 HOH HOH . K 6 HOH B 33 2033 2033 HOH HOH . K 6 HOH B 34 2034 2034 HOH HOH . K 6 HOH B 35 2035 2035 HOH HOH . K 6 HOH B 36 2036 2036 HOH HOH . K 6 HOH B 37 2037 2037 HOH HOH . K 6 HOH B 38 2038 2038 HOH HOH . K 6 HOH B 39 2039 2039 HOH HOH . K 6 HOH B 40 2040 2040 HOH HOH . K 6 HOH B 41 2041 2041 HOH HOH . K 6 HOH B 42 2042 2042 HOH HOH . K 6 HOH B 43 2043 2043 HOH HOH . K 6 HOH B 44 2044 2044 HOH HOH . K 6 HOH B 45 2045 2045 HOH HOH . K 6 HOH B 46 2046 2046 HOH HOH . K 6 HOH B 47 2047 2047 HOH HOH . K 6 HOH B 48 2048 2048 HOH HOH . K 6 HOH B 49 2049 2049 HOH HOH . L 6 HOH C 1 2001 2001 HOH HOH . L 6 HOH C 2 2002 2002 HOH HOH . L 6 HOH C 3 2003 2003 HOH HOH . L 6 HOH C 4 2004 2004 HOH HOH . L 6 HOH C 5 2005 2005 HOH HOH . L 6 HOH C 6 2006 2006 HOH HOH . L 6 HOH C 7 2007 2007 HOH HOH . L 6 HOH C 8 2008 2008 HOH HOH . L 6 HOH C 9 2009 2009 HOH HOH . M 6 HOH D 1 2001 2001 HOH HOH . M 6 HOH D 2 2002 2002 HOH HOH . M 6 HOH D 3 2003 2003 HOH HOH . M 6 HOH D 4 2004 2004 HOH HOH . M 6 HOH D 5 2005 2005 HOH HOH . M 6 HOH D 6 2006 2006 HOH HOH . M 6 HOH D 7 2007 2007 HOH HOH . M 6 HOH D 8 2008 2008 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C22 QQ2 . . . E 3 3.868 41.776 50.557 1 44.59 ? C22 QQ2 1296 A 1 HETATM 2 C C1 QQ2 . . . E 3 9.721 44.776 50.454 1 35 ? C1 QQ2 1296 A 1 HETATM 3 C C5 QQ2 . . . E 3 7.754 43.67 49.894 1 39.68 ? C5 QQ2 1296 A 1 HETATM 4 C C4 QQ2 . . . E 3 7.057 44.598 50.699 1 40.68 ? C4 QQ2 1296 A 1 HETATM 5 C C3 QQ2 . . . E 3 7.742 45.625 51.384 1 39.68 ? C3 QQ2 1296 A 1 HETATM 6 C C11 QQ2 . . . E 3 3.192 45.811 53.544 1 46.8 ? C11 QQ2 1296 A 1 HETATM 7 C C10 QQ2 . . . E 3 3.434 46.478 52.348 1 47.31 ? C10 QQ2 1296 A 1 HETATM 8 C C9 QQ2 . . . E 3 4.743 46.727 51.912 1 46.51 ? C9 QQ2 1296 A 1 HETATM 9 C C8 QQ2 . . . E 3 5.838 46.291 52.665 1 46.52 ? C8 QQ2 1296 A 1 HETATM 10 C C12 QQ2 . . . E 3 4.264 45.364 54.311 1 46.83 ? C12 QQ2 1296 A 1 HETATM 11 C C17 QQ2 . . . E 3 8.643 47.655 53.811 1 49.07 ? C17 QQ2 1296 A 1 HETATM 12 C C16 QQ2 . . . E 3 7.788 47.81 52.583 1 44.1 ? C16 QQ2 1296 A 1 HETATM 13 C C13 QQ2 . . . E 3 5.56 45.602 53.867 1 46.64 ? C13 QQ2 1296 A 1 HETATM 14 C C20 QQ2 . . . E 3 5.868 42.147 49.293 1 41.23 ? C20 QQ2 1296 A 1 HETATM 15 N N2 QQ2 . . . E 3 9.081 45.67 51.226 1 38.3 ? N2 QQ2 1296 A 1 HETATM 16 N N6 QQ2 . . . E 3 9.086 43.804 49.79 1 36.85 ? N6 QQ2 1296 A 1 HETATM 17 N N7 QQ2 . . . E 3 7.115 46.545 52.197 1 43.66 ? N7 QQ2 1296 A 1 HETATM 18 N N18 QQ2 . . . E 3 9.349 47.552 54.769 1 45.1 ? N18 QQ2 1296 A 1 HETATM 19 N N19 QQ2 . . . E 3 7.149 42.607 49.172 1 42.61 ? N19 QQ2 1296 A 1 HETATM 20 C C21 QQ2 . . . E 3 5.174 42.253 50.495 1 40.99 ? C21 QQ2 1296 A 1 HETATM 21 C C23 QQ2 . . . E 3 3.229 41.196 49.455 1 45.09 ? C23 QQ2 1296 A 1 HETATM 22 C C24 QQ2 . . . E 3 3.935 41.089 48.251 1 44.18 ? C24 QQ2 1296 A 1 HETATM 23 C C25 QQ2 . . . E 3 5.257 41.568 48.195 1 41.62 ? C25 QQ2 1296 A 1 HETATM 24 O O26 QQ2 . . . E 3 1.932 40.744 49.622 1 46.45 ? O26 QQ2 1296 A 1 HETATM 25 C C27 QQ2 . . . E 3 1.129 40.212 48.562 1 50.68 ? C27 QQ2 1296 A 1 HETATM 26 C C28 QQ2 . . . E 3 -0.402 40.196 48.801 1 52.01 ? C28 QQ2 1296 A 1 HETATM 27 C C29 QQ2 . . . E 3 -0.906 40.649 50.19 1 53.91 ? C29 QQ2 1296 A 1 HETATM 28 N N30 QQ2 . . . E 3 -2.404 40.594 50.223 1 56 ? N30 QQ2 1296 A 1 HETATM 29 C C31 QQ2 . . . E 3 -3.175 41.746 50.699 1 55.5 ? C31 QQ2 1296 A 1 HETATM 30 C C32 QQ2 . . . E 3 -3.162 39.369 49.953 1 54.66 ? C32 QQ2 1296 A 1 HETATM 31 O O33 QQ2 . . . E 3 -1.028 40.979 47.766 1 53.3 ? O33 QQ2 1296 A 1 HETATM 32 CL CL1 QQ2 . . . E 3 6.836 44.978 54.925 1 49.6 ? CL1 QQ2 1296 A 1 HETATM 33 C C33 QQ2 . . . E 3 2.277 46.95 51.519 1 45.9 ? C33 QQ2 1296 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 33 #