data_2IWW # _model_server_result.job_id QNI9A86CZbdnpfnWsgEcXA _model_server_result.datetime_utc '2024-11-04 22:38:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2iww # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":1288}' # _entry.id 2IWW # _exptl.entry_id 2IWW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 4 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IWW _cell.length_a 70.38 _cell.length_b 71.14 _cell.length_c 191.61 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IWW _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PQS monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,T 1 1 B,M,N,O,P,Q,R,S,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 S N N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 94 n n C1 C2 BOG sing 95 n n C1 O5 BOG sing 96 n n C1 H1 BOG sing 97 n n O1 C1' BOG sing 98 n n C2 O2 BOG sing 99 n n C2 C3 BOG sing 100 n n C2 H2 BOG sing 101 n n O2 HO2 BOG sing 102 n n C3 O3 BOG sing 103 n n C3 C4 BOG sing 104 n n C3 H3 BOG sing 105 n n O3 HO3 BOG sing 106 n n C4 O4 BOG sing 107 n n C4 C5 BOG sing 108 n n C4 H4 BOG sing 109 n n O4 HO4 BOG sing 110 n n C5 O5 BOG sing 111 n n C5 C6 BOG sing 112 n n C5 H5 BOG sing 113 n n C6 O6 BOG sing 114 n n C6 H61 BOG sing 115 n n C6 H62 BOG sing 116 n n O6 HO6 BOG sing 117 n n C1' C2' BOG sing 118 n n C1' "H1'1" BOG sing 119 n n C1' "H1'2" BOG sing 120 n n C2' C3' BOG sing 121 n n C2' "H2'1" BOG sing 122 n n C2' "H2'2" BOG sing 123 n n C3' C4' BOG sing 124 n n C3' "H3'1" BOG sing 125 n n C3' "H3'2" BOG sing 126 n n C4' C5' BOG sing 127 n n C4' "H4'1" BOG sing 128 n n C4' "H4'2" BOG sing 129 n n C5' C6' BOG sing 130 n n C5' "H5'1" BOG sing 131 n n C5' "H5'2" BOG sing 132 n n C6' C7' BOG sing 133 n n C6' "H6'1" BOG sing 134 n n C6' "H6'2" BOG sing 135 n n C7' C8' BOG sing 136 n n C7' "H7'1" BOG sing 137 n n C7' "H7'2" BOG sing 138 n n C8' "H8'1" BOG sing 139 n n C8' "H8'2" BOG sing 140 n n C8' "H8'3" BOG sing 141 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 2IWW _atom_sites.fract_transf_matrix[1][1] 0.014209 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014057 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BGC A 1 1281 1281 BGC BGC . D 3 LDA A 1 1282 1282 LDA LDA . E 4 BOG A 1 1283 1283 BOG BOG . F 4 BOG A 1 1284 1284 BOG BOG . G 4 BOG A 1 1285 1285 BOG BOG . H 4 BOG A 1 1286 1286 BOG BOG . I 4 BOG A 1 1287 1287 BOG BOG . J 4 BOG A 1 1288 1288 BOG BOG . K 4 BOG A 1 1289 1289 BOG BOG . L 4 BOG A 1 1290 1290 BOG BOG . M 2 BGC B 1 1281 1281 BGC BGC . N 2 BGC B 1 1282 1282 BGC BGC . O 2 BGC B 1 1283 1283 BGC BGC . P 4 BOG B 1 1284 1284 BOG BOG . Q 4 BOG B 1 1285 1285 BOG BOG . R 4 BOG B 1 1286 1286 BOG BOG . S 4 BOG B 1 1287 1287 BOG BOG . T 5 HOH A 1 2001 2001 HOH HOH . T 5 HOH A 2 2002 2002 HOH HOH . T 5 HOH A 3 2003 2003 HOH HOH . T 5 HOH A 4 2004 2004 HOH HOH . T 5 HOH A 5 2005 2005 HOH HOH . T 5 HOH A 6 2006 2006 HOH HOH . T 5 HOH A 7 2007 2007 HOH HOH . T 5 HOH A 8 2008 2008 HOH HOH . T 5 HOH A 9 2009 2009 HOH HOH . T 5 HOH A 10 2010 2010 HOH HOH . T 5 HOH A 11 2011 2011 HOH HOH . T 5 HOH A 12 2012 2012 HOH HOH . T 5 HOH A 13 2013 2013 HOH HOH . T 5 HOH A 14 2014 2014 HOH HOH . T 5 HOH A 15 2015 2015 HOH HOH . T 5 HOH A 16 2016 2016 HOH HOH . T 5 HOH A 17 2017 2017 HOH HOH . U 5 HOH B 1 2001 2001 HOH HOH . U 5 HOH B 2 2002 2002 HOH HOH . U 5 HOH B 3 2003 2003 HOH HOH . U 5 HOH B 4 2004 2004 HOH HOH . U 5 HOH B 5 2005 2005 HOH HOH . U 5 HOH B 6 2006 2006 HOH HOH . U 5 HOH B 7 2007 2007 HOH HOH . U 5 HOH B 8 2008 2008 HOH HOH . U 5 HOH B 9 2009 2009 HOH HOH . U 5 HOH B 10 2010 2010 HOH HOH . U 5 HOH B 11 2011 2011 HOH HOH . U 5 HOH B 12 2012 2012 HOH HOH . U 5 HOH B 13 2013 2013 HOH HOH . U 5 HOH B 14 2014 2014 HOH HOH . U 5 HOH B 15 2015 2015 HOH HOH . U 5 HOH B 16 2016 2016 HOH HOH . U 5 HOH B 17 2017 2017 HOH HOH . U 5 HOH B 18 2018 2018 HOH HOH . U 5 HOH B 19 2019 2019 HOH HOH . U 5 HOH B 20 2020 2020 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . J 4 -33.968 -35.191 27.057 1 83.32 ? C1 BOG 1288 A 1 HETATM 2 O O1 BOG . . . J 4 -34.993 -35.958 27.784 1 81.23 ? O1 BOG 1288 A 1 HETATM 3 C C2 BOG . . . J 4 -32.817 -36.077 26.499 1 84.18 ? C2 BOG 1288 A 1 HETATM 4 O O2 BOG . . . J 4 -32.091 -36.693 27.594 1 85.07 ? O2 BOG 1288 A 1 HETATM 5 C C3 BOG . . . J 4 -31.843 -35.304 25.555 1 83.64 ? C3 BOG 1288 A 1 HETATM 6 O O3 BOG . . . J 4 -31.132 -36.213 24.71 1 84.31 ? O3 BOG 1288 A 1 HETATM 7 C C4 BOG . . . J 4 -32.571 -34.276 24.67 1 83.32 ? C4 BOG 1288 A 1 HETATM 8 O O4 BOG . . . J 4 -31.639 -33.429 23.98 1 79.19 ? O4 BOG 1288 A 1 HETATM 9 C C5 BOG . . . J 4 -33.5 -33.45 25.555 1 82.14 ? C5 BOG 1288 A 1 HETATM 10 O O5 BOG . . . J 4 -34.542 -34.358 25.984 1 83.33 ? O5 BOG 1288 A 1 HETATM 11 C C6 BOG . . . J 4 -33.974 -32.202 24.84 1 81.6 ? C6 BOG 1288 A 1 HETATM 12 O O6 BOG . . . J 4 -32.907 -31.256 24.93 1 80.13 ? O6 BOG 1288 A 1 HETATM 13 C C1' BOG . . . J 4 -34.935 -35.761 29.249 1 78.03 ? C1' BOG 1288 A 1 HETATM 14 C C2' BOG . . . J 4 -34.552 -37.023 30.059 1 75.76 ? C2' BOG 1288 A 1 HETATM 15 C C3' BOG . . . J 4 -34.713 -36.826 31.574 1 73.91 ? C3' BOG 1288 A 1 HETATM 16 C C4' BOG . . . J 4 -36.136 -36.364 31.928 1 73.74 ? C4' BOG 1288 A 1 HETATM 17 C C5' BOG . . . J 4 -36.33 -36.106 33.444 1 73.23 ? C5' BOG 1288 A 1 HETATM 18 C C6' BOG . . . J 4 -37.814 -35.797 33.806 1 68.97 ? C6' BOG 1288 A 1 HETATM 19 C C7' BOG . . . J 4 -37.994 -35.429 35.293 1 63.71 ? C7' BOG 1288 A 1 HETATM 20 C C8' BOG . . . J 4 -39.308 -35.961 35.872 1 60.01 ? C8' BOG 1288 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 20 #