data_2IXU # _model_server_result.job_id uWfFKUQ4EgHVCercAlaaOA _model_server_result.datetime_utc '2024-11-14 20:34:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ixu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 2IXU # _exptl.entry_id 2IXU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IXU _cell.length_a 80.521 _cell.length_b 96.504 _cell.length_c 127.317 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IXU _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 NAG _pdbx_entity_branch_link.comp_id_2 MUB _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B MUB 1 B 1 MUB A 1341 MU2 2 n B NAG 2 B 2 NAG A 1340 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D C ALA . A ALA 404 1_555 E N ZGL . A ZGL 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 sing covale ? covale2 D N ALA . A ALA 404 1_555 B C10 MUB . B MUB 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 sing covale ? covale3 B O4 MUB . B MUB 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.386 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 83 n n C O2 FMT sing 84 n n C H FMT sing 85 n n O2 HO2 FMT sing 86 n n # _atom_sites.entry_id 2IXU _atom_sites.fract_transf_matrix[1][1] 0.012419 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010362 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007854 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 FMT A 1 401 1342 FMT FMT . D 4 ALA A 1 404 1341 ALA MU2 . E 5 ZGL A 1 405 1341 ZGL MU2 . F 6 HOH A 1 501 2127 HOH HOH . F 6 HOH A 2 502 2170 HOH HOH . F 6 HOH A 3 503 2171 HOH HOH . F 6 HOH A 4 504 2118 HOH HOH . F 6 HOH A 5 505 2036 HOH HOH . F 6 HOH A 6 506 2151 HOH HOH . F 6 HOH A 7 507 2053 HOH HOH . F 6 HOH A 8 508 2034 HOH HOH . F 6 HOH A 9 509 2013 HOH HOH . F 6 HOH A 10 510 2096 HOH HOH . F 6 HOH A 11 511 2138 HOH HOH . F 6 HOH A 12 512 2018 HOH HOH . F 6 HOH A 13 513 2107 HOH HOH . F 6 HOH A 14 514 2086 HOH HOH . F 6 HOH A 15 515 2080 HOH HOH . F 6 HOH A 16 516 2167 HOH HOH . F 6 HOH A 17 517 2120 HOH HOH . F 6 HOH A 18 518 2112 HOH HOH . F 6 HOH A 19 519 2046 HOH HOH . F 6 HOH A 20 520 2075 HOH HOH . F 6 HOH A 21 521 2157 HOH HOH . F 6 HOH A 22 522 2153 HOH HOH . F 6 HOH A 23 523 2117 HOH HOH . F 6 HOH A 24 524 2161 HOH HOH . F 6 HOH A 25 525 2140 HOH HOH . F 6 HOH A 26 526 2131 HOH HOH . F 6 HOH A 27 527 2145 HOH HOH . F 6 HOH A 28 528 2125 HOH HOH . F 6 HOH A 29 529 2055 HOH HOH . F 6 HOH A 30 530 2095 HOH HOH . F 6 HOH A 31 531 2029 HOH HOH . F 6 HOH A 32 532 2023 HOH HOH . F 6 HOH A 33 533 2148 HOH HOH . F 6 HOH A 34 534 2043 HOH HOH . F 6 HOH A 35 535 2050 HOH HOH . F 6 HOH A 36 536 2028 HOH HOH . F 6 HOH A 37 537 2168 HOH HOH . F 6 HOH A 38 538 2097 HOH HOH . F 6 HOH A 39 539 2083 HOH HOH . F 6 HOH A 40 540 2061 HOH HOH . F 6 HOH A 41 541 2144 HOH HOH . F 6 HOH A 42 542 2160 HOH HOH . F 6 HOH A 43 543 2045 HOH HOH . F 6 HOH A 44 544 2166 HOH HOH . F 6 HOH A 45 545 2058 HOH HOH . F 6 HOH A 46 546 2047 HOH HOH . F 6 HOH A 47 547 2146 HOH HOH . F 6 HOH A 48 548 2084 HOH HOH . F 6 HOH A 49 549 2126 HOH HOH . F 6 HOH A 50 550 2089 HOH HOH . F 6 HOH A 51 551 2044 HOH HOH . F 6 HOH A 52 552 2134 HOH HOH . F 6 HOH A 53 553 2100 HOH HOH . F 6 HOH A 54 554 2068 HOH HOH . F 6 HOH A 55 555 2073 HOH HOH . F 6 HOH A 56 556 2105 HOH HOH . F 6 HOH A 57 557 2123 HOH HOH . F 6 HOH A 58 558 2128 HOH HOH . F 6 HOH A 59 559 2141 HOH HOH . F 6 HOH A 60 560 2060 HOH HOH . F 6 HOH A 61 561 2002 HOH HOH . F 6 HOH A 62 562 2017 HOH HOH . F 6 HOH A 63 563 2032 HOH HOH . F 6 HOH A 64 564 2063 HOH HOH . F 6 HOH A 65 565 2066 HOH HOH . F 6 HOH A 66 566 2159 HOH HOH . F 6 HOH A 67 567 2124 HOH HOH . F 6 HOH A 68 568 2116 HOH HOH . F 6 HOH A 69 569 2102 HOH HOH . F 6 HOH A 70 570 2150 HOH HOH . F 6 HOH A 71 571 2022 HOH HOH . F 6 HOH A 72 572 2011 HOH HOH . F 6 HOH A 73 573 2008 HOH HOH . F 6 HOH A 74 574 2054 HOH HOH . F 6 HOH A 75 575 2129 HOH HOH . F 6 HOH A 76 576 2135 HOH HOH . F 6 HOH A 77 577 2071 HOH HOH . F 6 HOH A 78 578 2065 HOH HOH . F 6 HOH A 79 579 2030 HOH HOH . F 6 HOH A 80 580 2108 HOH HOH . F 6 HOH A 81 581 2067 HOH HOH . F 6 HOH A 82 582 2164 HOH HOH . F 6 HOH A 83 583 2031 HOH HOH . F 6 HOH A 84 584 2172 HOH HOH . F 6 HOH A 85 585 2041 HOH HOH . F 6 HOH A 86 586 2014 HOH HOH . F 6 HOH A 87 587 2074 HOH HOH . F 6 HOH A 88 588 2087 HOH HOH . F 6 HOH A 89 589 2115 HOH HOH . F 6 HOH A 90 590 2121 HOH HOH . F 6 HOH A 91 591 2056 HOH HOH . F 6 HOH A 92 592 2006 HOH HOH . F 6 HOH A 93 593 2130 HOH HOH . F 6 HOH A 94 594 2162 HOH HOH . F 6 HOH A 95 595 2103 HOH HOH . F 6 HOH A 96 596 2132 HOH HOH . F 6 HOH A 97 597 2049 HOH HOH . F 6 HOH A 98 598 2010 HOH HOH . F 6 HOH A 99 599 2059 HOH HOH . F 6 HOH A 100 600 2048 HOH HOH . F 6 HOH A 101 601 2038 HOH HOH . F 6 HOH A 102 602 2005 HOH HOH . F 6 HOH A 103 603 2037 HOH HOH . F 6 HOH A 104 604 2007 HOH HOH . F 6 HOH A 105 605 2163 HOH HOH . F 6 HOH A 106 606 2111 HOH HOH . F 6 HOH A 107 607 2012 HOH HOH . F 6 HOH A 108 608 2079 HOH HOH . F 6 HOH A 109 609 2137 HOH HOH . F 6 HOH A 110 610 2155 HOH HOH . F 6 HOH A 111 611 2106 HOH HOH . F 6 HOH A 112 612 2152 HOH HOH . F 6 HOH A 113 613 2147 HOH HOH . F 6 HOH A 114 614 2042 HOH HOH . F 6 HOH A 115 615 2114 HOH HOH . F 6 HOH A 116 616 2039 HOH HOH . F 6 HOH A 117 617 2078 HOH HOH . F 6 HOH A 118 618 2016 HOH HOH . F 6 HOH A 119 619 2099 HOH HOH . F 6 HOH A 120 620 2064 HOH HOH . F 6 HOH A 121 621 2139 HOH HOH . F 6 HOH A 122 622 2091 HOH HOH . F 6 HOH A 123 623 2109 HOH HOH . F 6 HOH A 124 624 2133 HOH HOH . F 6 HOH A 125 625 2142 HOH HOH . F 6 HOH A 126 626 2021 HOH HOH . F 6 HOH A 127 627 2070 HOH HOH . F 6 HOH A 128 628 2156 HOH HOH . F 6 HOH A 129 629 2093 HOH HOH . F 6 HOH A 130 630 2062 HOH HOH . F 6 HOH A 131 631 2158 HOH HOH . F 6 HOH A 132 632 2020 HOH HOH . F 6 HOH A 133 633 2019 HOH HOH . F 6 HOH A 134 634 2088 HOH HOH . F 6 HOH A 135 635 2113 HOH HOH . F 6 HOH A 136 636 2098 HOH HOH . F 6 HOH A 137 637 2143 HOH HOH . F 6 HOH A 138 638 2076 HOH HOH . F 6 HOH A 139 639 2136 HOH HOH . F 6 HOH A 140 640 2069 HOH HOH . F 6 HOH A 141 641 2085 HOH HOH . F 6 HOH A 142 642 2165 HOH HOH . F 6 HOH A 143 643 2094 HOH HOH . F 6 HOH A 144 644 2081 HOH HOH . F 6 HOH A 145 645 2122 HOH HOH . F 6 HOH A 146 646 2092 HOH HOH . F 6 HOH A 147 647 2090 HOH HOH . F 6 HOH A 148 648 2082 HOH HOH . F 6 HOH A 149 649 2154 HOH HOH . F 6 HOH A 150 650 2104 HOH HOH . F 6 HOH A 151 651 2072 HOH HOH . F 6 HOH A 152 652 2149 HOH HOH . F 6 HOH A 153 653 2119 HOH HOH . F 6 HOH A 154 654 2169 HOH HOH . F 6 HOH A 155 655 2077 HOH HOH . F 6 HOH A 156 656 2057 HOH HOH . F 6 HOH A 157 657 2101 HOH HOH . F 6 HOH A 158 658 2110 HOH HOH . F 6 HOH A 159 659 2035 HOH HOH . F 6 HOH A 160 660 2024 HOH HOH . F 6 HOH A 161 661 2040 HOH HOH . F 6 HOH A 162 662 2025 HOH HOH . F 6 HOH A 163 663 2027 HOH HOH . F 6 HOH A 164 664 2015 HOH HOH . F 6 HOH A 165 665 2033 HOH HOH . F 6 HOH A 166 666 2026 HOH HOH . F 6 HOH A 167 667 2052 HOH HOH . F 6 HOH A 168 668 2009 HOH HOH . F 6 HOH A 169 669 2003 HOH HOH . F 6 HOH A 170 670 2051 HOH HOH . F 6 HOH A 171 671 2004 HOH HOH . F 6 HOH A 172 672 2001 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . C 3 7.338 49.432 25.09 1 30.41 ? C FMT 401 A 1 HETATM 2 O O1 FMT . . . C 3 6.754 48.271 24.933 1 28.37 ? O1 FMT 401 A 1 HETATM 3 O O2 FMT . . . C 3 7.593 50.04 26.195 1 29.56 ? O2 FMT 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 3 #