data_2IZE # _model_server_result.job_id zDbJhygpZQRgzL1G3jMNbA _model_server_result.datetime_utc '2024-11-13 14:21:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ize # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":405}' # _entry.id 2IZE # _exptl.entry_id 2IZE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IZE _cell.length_a 94.96 _cell.length_b 105.36 _cell.length_c 47.76 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IZE _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PQS octameric 8 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J 1 1,2 A,B,C,D,E,F,G,H,I,J 2 1,3,4,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 2_655 -x+1,-y,z -1 0 0 0 -1 0 0 0 1 94.96 0 0 4 'crystal symmetry operation' 3_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 94.96 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 F N NH4 . D NH4 508 1_555 G CL CL . D CL 1459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 0.883 ? metalc ? metalc1 C NA NA . B NA 403 1_555 D CL CL . B CL 1464 1_555 ? A ? ? ? ? ? ? ? ? ? ? 0.748 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O1 FMT doub 70 n n C O2 FMT sing 71 n n C H FMT sing 72 n n O2 HO2 FMT sing 73 n n # _atom_sites.entry_id 2IZE _atom_sites.fract_transf_matrix[1][1] 0.010531 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009491 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020938 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA B 1 403 403 NA NA . D 3 CL B 1 1464 1464 CL CL . E 4 FMT B 1 405 405 FMT FMT . F 5 NH4 D 1 508 508 NH4 NH4 . G 3 CL D 1 1459 1459 CL CL . H 4 FMT D 1 401 401 FMT FMT . I 6 HOH B 1 402 402 HOH HOH . I 6 HOH B 2 404 404 HOH HOH . I 6 HOH B 3 455 455 HOH HOH . I 6 HOH B 4 458 458 HOH HOH . I 6 HOH B 5 475 475 HOH HOH . I 6 HOH B 6 491 491 HOH HOH . I 6 HOH B 7 499 499 HOH HOH . I 6 HOH B 8 506 506 HOH HOH . I 6 HOH B 9 507 507 HOH HOH . I 6 HOH B 10 605 605 HOH HOH . I 6 HOH B 11 606 606 HOH HOH . I 6 HOH B 12 607 607 HOH HOH . I 6 HOH B 13 609 609 HOH HOH . I 6 HOH B 14 613 613 HOH HOH . I 6 HOH B 15 617 617 HOH HOH . I 6 HOH B 16 618 618 HOH HOH . I 6 HOH B 17 619 619 HOH HOH . I 6 HOH B 18 620 620 HOH HOH . I 6 HOH B 19 621 621 HOH HOH . I 6 HOH B 20 628 628 HOH HOH . I 6 HOH B 21 639 639 HOH HOH . I 6 HOH B 22 643 643 HOH HOH . I 6 HOH B 23 649 649 HOH HOH . I 6 HOH B 24 652 652 HOH HOH . I 6 HOH B 25 653 653 HOH HOH . I 6 HOH B 26 660 660 HOH HOH . I 6 HOH B 27 662 662 HOH HOH . I 6 HOH B 28 664 664 HOH HOH . I 6 HOH B 29 669 669 HOH HOH . I 6 HOH B 30 803 803 HOH HOH . I 6 HOH B 31 867 867 HOH HOH . I 6 HOH B 32 966 966 HOH HOH . I 6 HOH B 33 988 988 HOH HOH . I 6 HOH B 34 996 996 HOH HOH . I 6 HOH B 35 1015 1015 HOH HOH . I 6 HOH B 36 1255 1255 HOH HOH . I 6 HOH B 37 1369 1369 HOH HOH . I 6 HOH B 38 1370 1370 HOH HOH . I 6 HOH B 39 1372 1372 HOH HOH . I 6 HOH B 40 1409 1409 HOH HOH . I 6 HOH B 41 1439 1439 HOH HOH . I 6 HOH B 42 1460 1460 HOH HOH . I 6 HOH B 43 1461 1461 HOH HOH . I 6 HOH B 44 1512 1512 HOH HOH . I 6 HOH B 45 1518 1518 HOH HOH . I 6 HOH B 46 1545 1545 HOH HOH . I 6 HOH B 47 1547 1547 HOH HOH . I 6 HOH B 48 1550 1550 HOH HOH . I 6 HOH B 49 1592 1592 HOH HOH . I 6 HOH B 50 1603 1603 HOH HOH . I 6 HOH B 51 1606 1606 HOH HOH . I 6 HOH B 52 1611 1611 HOH HOH . I 6 HOH B 53 1620 1620 HOH HOH . I 6 HOH B 54 1630 1630 HOH HOH . I 6 HOH B 55 1636 1636 HOH HOH . I 6 HOH B 56 1663 1663 HOH HOH . I 6 HOH B 57 1667 1667 HOH HOH . I 6 HOH B 58 1668 1668 HOH HOH . J 6 HOH D 1 400 400 HOH HOH . J 6 HOH D 2 456 456 HOH HOH . J 6 HOH D 3 460 460 HOH HOH . J 6 HOH D 4 476 476 HOH HOH . J 6 HOH D 5 492 492 HOH HOH . J 6 HOH D 6 500 500 HOH HOH . J 6 HOH D 7 503 503 HOH HOH . J 6 HOH D 8 593 593 HOH HOH . J 6 HOH D 9 602 602 HOH HOH . J 6 HOH D 10 612 612 HOH HOH . J 6 HOH D 11 616 616 HOH HOH . J 6 HOH D 12 622 622 HOH HOH . J 6 HOH D 13 624 624 HOH HOH . J 6 HOH D 14 625 625 HOH HOH . J 6 HOH D 15 626 626 HOH HOH . J 6 HOH D 16 629 629 HOH HOH . J 6 HOH D 17 635 635 HOH HOH . J 6 HOH D 18 636 636 HOH HOH . J 6 HOH D 19 641 641 HOH HOH . J 6 HOH D 20 642 642 HOH HOH . J 6 HOH D 21 655 655 HOH HOH . J 6 HOH D 22 656 656 HOH HOH . J 6 HOH D 23 666 666 HOH HOH . J 6 HOH D 24 668 668 HOH HOH . J 6 HOH D 25 670 670 HOH HOH . J 6 HOH D 26 671 671 HOH HOH . J 6 HOH D 27 677 677 HOH HOH . J 6 HOH D 28 679 679 HOH HOH . J 6 HOH D 29 688 688 HOH HOH . J 6 HOH D 30 689 689 HOH HOH . J 6 HOH D 31 697 697 HOH HOH . J 6 HOH D 32 698 698 HOH HOH . J 6 HOH D 33 728 728 HOH HOH . J 6 HOH D 34 729 729 HOH HOH . J 6 HOH D 35 734 734 HOH HOH . J 6 HOH D 36 742 742 HOH HOH . J 6 HOH D 37 802 802 HOH HOH . J 6 HOH D 38 933 933 HOH HOH . J 6 HOH D 39 951 951 HOH HOH . J 6 HOH D 40 952 952 HOH HOH . J 6 HOH D 41 968 968 HOH HOH . J 6 HOH D 42 1076 1076 HOH HOH . J 6 HOH D 43 1090 1090 HOH HOH . J 6 HOH D 44 1174 1174 HOH HOH . J 6 HOH D 45 1322 1322 HOH HOH . J 6 HOH D 46 1371 1371 HOH HOH . J 6 HOH D 47 1379 1379 HOH HOH . J 6 HOH D 48 1380 1380 HOH HOH . J 6 HOH D 49 1394 1394 HOH HOH . J 6 HOH D 50 1397 1397 HOH HOH . J 6 HOH D 51 1400 1400 HOH HOH . J 6 HOH D 52 1402 1402 HOH HOH . J 6 HOH D 53 1532 1532 HOH HOH . J 6 HOH D 54 1541 1541 HOH HOH . J 6 HOH D 55 1542 1542 HOH HOH . J 6 HOH D 56 1551 1551 HOH HOH . J 6 HOH D 57 1556 1556 HOH HOH . J 6 HOH D 58 1561 1561 HOH HOH . J 6 HOH D 59 1563 1563 HOH HOH . J 6 HOH D 60 1580 1580 HOH HOH . J 6 HOH D 61 1581 1581 HOH HOH . J 6 HOH D 62 1582 1582 HOH HOH . J 6 HOH D 63 1584 1584 HOH HOH . J 6 HOH D 64 1591 1591 HOH HOH . J 6 HOH D 65 1602 1602 HOH HOH . J 6 HOH D 66 1613 1613 HOH HOH . J 6 HOH D 67 1614 1614 HOH HOH . J 6 HOH D 68 1617 1617 HOH HOH . J 6 HOH D 69 1635 1635 HOH HOH . J 6 HOH D 70 1647 1647 HOH HOH . J 6 HOH D 71 1653 1653 HOH HOH . J 6 HOH D 72 1657 1657 HOH HOH . J 6 HOH D 73 1659 1659 HOH HOH . J 6 HOH D 74 1669 1669 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . A . E 4 28.841 13.803 -9.408 0.64 59.34 ? C FMT 405 B 1 HETATM 2 O O1 FMT . A . E 4 28.367 14.909 -9.572 0.64 60.95 ? O1 FMT 405 B 1 HETATM 3 O O2 FMT . A . E 4 29.816 13.36 -10.012 0.64 60.23 ? O2 FMT 405 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 3 #