data_2IZH # _model_server_result.job_id HaiqiLBYXtmG9VG5pr_HXA _model_server_result.datetime_utc '2024-11-13 14:41:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2izh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 2IZH # _exptl.entry_id 2IZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.311 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BIOTIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2IZH _cell.length_a 95.24 _cell.length_b 105.34 _cell.length_c 47.12 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2IZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C10 H16 N2 O3 S' _chem_comp.formula_weight 244.311 _chem_comp.id BTN _chem_comp.mon_nstd_flag . _chem_comp.name BIOTIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 O11 BTN doub 70 n n C11 O12 BTN sing 71 n n C11 C10 BTN sing 72 n n O12 HO2 BTN sing 73 n n C10 C9 BTN sing 74 n n C10 H101 BTN sing 75 n n C10 H102 BTN sing 76 n n C9 C8 BTN sing 77 n n C9 H91 BTN sing 78 n n C9 H92 BTN sing 79 n n C8 C7 BTN sing 80 n n C8 H81 BTN sing 81 n n C8 H82 BTN sing 82 n n C7 C2 BTN sing 83 n n C7 H71 BTN sing 84 n n C7 H72 BTN sing 85 n n C2 S1 BTN sing 86 n n C2 C4 BTN sing 87 n n C2 H2 BTN sing 88 n n S1 C6 BTN sing 89 n n C6 C5 BTN sing 90 n n C6 H61 BTN sing 91 n n C6 H62 BTN sing 92 n n C5 N1 BTN sing 93 n n C5 C4 BTN sing 94 n n C5 H5 BTN sing 95 n n N1 C3 BTN sing 96 n n N1 HN1 BTN sing 97 n n C3 O3 BTN doub 98 n n C3 N2 BTN sing 99 n n N2 C4 BTN sing 100 n n N2 HN2 BTN sing 101 n n C4 H4 BTN sing 102 n n # _atom_sites.entry_id 2IZH _atom_sites.fract_transf_matrix[1][1] 0.0105 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021222 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BTN B 1 300 300 BTN BTN . D 2 BTN D 1 300 300 BTN BTN . E 3 HOH B 1 499 499 HOH HOH . E 3 HOH B 2 506 506 HOH HOH . E 3 HOH B 3 513 513 HOH HOH . E 3 HOH B 4 524 524 HOH HOH . E 3 HOH B 5 534 534 HOH HOH . E 3 HOH B 6 535 535 HOH HOH . E 3 HOH B 7 549 549 HOH HOH . E 3 HOH B 8 551 551 HOH HOH . E 3 HOH B 9 552 552 HOH HOH . E 3 HOH B 10 605 605 HOH HOH . E 3 HOH B 11 606 606 HOH HOH . E 3 HOH B 12 609 609 HOH HOH . E 3 HOH B 13 613 613 HOH HOH . E 3 HOH B 14 617 617 HOH HOH . E 3 HOH B 15 619 619 HOH HOH . E 3 HOH B 16 620 620 HOH HOH . E 3 HOH B 17 621 621 HOH HOH . E 3 HOH B 18 628 628 HOH HOH . E 3 HOH B 19 629 629 HOH HOH . E 3 HOH B 20 637 637 HOH HOH . E 3 HOH B 21 639 639 HOH HOH . E 3 HOH B 22 643 643 HOH HOH . E 3 HOH B 23 646 646 HOH HOH . E 3 HOH B 24 649 649 HOH HOH . E 3 HOH B 25 652 652 HOH HOH . E 3 HOH B 26 653 653 HOH HOH . E 3 HOH B 27 660 660 HOH HOH . E 3 HOH B 28 662 662 HOH HOH . E 3 HOH B 29 664 664 HOH HOH . E 3 HOH B 30 669 669 HOH HOH . E 3 HOH B 31 680 680 HOH HOH . E 3 HOH B 32 683 683 HOH HOH . E 3 HOH B 33 722 722 HOH HOH . E 3 HOH B 34 727 727 HOH HOH . E 3 HOH B 35 742 742 HOH HOH . E 3 HOH B 36 868 868 HOH HOH . E 3 HOH B 37 966 966 HOH HOH . E 3 HOH B 38 972 972 HOH HOH . E 3 HOH B 39 988 988 HOH HOH . E 3 HOH B 40 996 996 HOH HOH . E 3 HOH B 41 1000 1000 HOH HOH . E 3 HOH B 42 1077 1077 HOH HOH . E 3 HOH B 43 1078 1078 HOH HOH . E 3 HOH B 44 1082 1082 HOH HOH . E 3 HOH B 45 1104 1104 HOH HOH . E 3 HOH B 46 1116 1116 HOH HOH . E 3 HOH B 47 1255 1255 HOH HOH . E 3 HOH B 48 1311 1311 HOH HOH . E 3 HOH B 49 1415 1415 HOH HOH . E 3 HOH B 50 1461 1461 HOH HOH . E 3 HOH B 51 1462 1462 HOH HOH . E 3 HOH B 52 1471 1471 HOH HOH . E 3 HOH B 53 1474 1474 HOH HOH . E 3 HOH B 54 1522 1522 HOH HOH . E 3 HOH B 55 1529 1529 HOH HOH . E 3 HOH B 56 1573 1573 HOH HOH . E 3 HOH B 57 1574 1574 HOH HOH . E 3 HOH B 58 1575 1575 HOH HOH . E 3 HOH B 59 1585 1585 HOH HOH . E 3 HOH B 60 1605 1605 HOH HOH . E 3 HOH B 61 1635 1635 HOH HOH . E 3 HOH B 62 1637 1637 HOH HOH . E 3 HOH B 63 1654 1654 HOH HOH . E 3 HOH B 64 1658 1658 HOH HOH . E 3 HOH B 65 1660 1660 HOH HOH . E 3 HOH B 66 1689 1689 HOH HOH . E 3 HOH B 67 1695 1695 HOH HOH . E 3 HOH B 68 1719 1719 HOH HOH . E 3 HOH B 69 1722 1722 HOH HOH . E 3 HOH B 70 1749 1749 HOH HOH . E 3 HOH B 71 1753 1753 HOH HOH . E 3 HOH B 72 1768 1768 HOH HOH . E 3 HOH B 73 1777 1777 HOH HOH . E 3 HOH B 74 1778 1778 HOH HOH . E 3 HOH B 75 1808 1808 HOH HOH . E 3 HOH B 76 1811 1811 HOH HOH . E 3 HOH B 77 1829 1829 HOH HOH . E 3 HOH B 78 1847 1847 HOH HOH . E 3 HOH B 79 1966 1966 HOH HOH . E 3 HOH B 80 2046 2046 HOH HOH . E 3 HOH B 81 2059 2059 HOH HOH . E 3 HOH B 82 2073 2073 HOH HOH . E 3 HOH B 83 2145 2145 HOH HOH . E 3 HOH B 84 2146 2146 HOH HOH . E 3 HOH B 85 2147 2147 HOH HOH . E 3 HOH B 86 2150 2150 HOH HOH . E 3 HOH B 87 2156 2156 HOH HOH . E 3 HOH B 88 2161 2161 HOH HOH . E 3 HOH B 89 2162 2162 HOH HOH . E 3 HOH B 90 2165 2165 HOH HOH . E 3 HOH B 91 2166 2166 HOH HOH . E 3 HOH B 92 2178 2178 HOH HOH . E 3 HOH B 93 2197 2197 HOH HOH . E 3 HOH B 94 2205 2205 HOH HOH . E 3 HOH B 95 2206 2206 HOH HOH . E 3 HOH B 96 2212 2212 HOH HOH . E 3 HOH B 97 2217 2217 HOH HOH . E 3 HOH B 98 2271 2271 HOH HOH . E 3 HOH B 99 2288 2288 HOH HOH . E 3 HOH B 100 2289 2289 HOH HOH . E 3 HOH B 101 2290 2290 HOH HOH . E 3 HOH B 102 2291 2291 HOH HOH . E 3 HOH B 103 2293 2293 HOH HOH . E 3 HOH B 104 2294 2294 HOH HOH . E 3 HOH B 105 2295 2295 HOH HOH . F 3 HOH D 1 481 481 HOH HOH . F 3 HOH D 2 488 488 HOH HOH . F 3 HOH D 3 492 492 HOH HOH . F 3 HOH D 4 503 503 HOH HOH . F 3 HOH D 5 512 512 HOH HOH . F 3 HOH D 6 515 515 HOH HOH . F 3 HOH D 7 527 527 HOH HOH . F 3 HOH D 8 529 529 HOH HOH . F 3 HOH D 9 543 543 HOH HOH . F 3 HOH D 10 568 568 HOH HOH . F 3 HOH D 11 589 589 HOH HOH . F 3 HOH D 12 593 593 HOH HOH . F 3 HOH D 13 597 597 HOH HOH . F 3 HOH D 14 602 602 HOH HOH . F 3 HOH D 15 603 603 HOH HOH . F 3 HOH D 16 607 607 HOH HOH . F 3 HOH D 17 612 612 HOH HOH . F 3 HOH D 18 616 616 HOH HOH . F 3 HOH D 19 622 622 HOH HOH . F 3 HOH D 20 624 624 HOH HOH . F 3 HOH D 21 625 625 HOH HOH . F 3 HOH D 22 626 626 HOH HOH . F 3 HOH D 23 627 627 HOH HOH . F 3 HOH D 24 633 633 HOH HOH . F 3 HOH D 25 635 635 HOH HOH . F 3 HOH D 26 636 636 HOH HOH . F 3 HOH D 27 641 641 HOH HOH . F 3 HOH D 28 642 642 HOH HOH . F 3 HOH D 29 655 655 HOH HOH . F 3 HOH D 30 656 656 HOH HOH . F 3 HOH D 31 663 663 HOH HOH . F 3 HOH D 32 666 666 HOH HOH . F 3 HOH D 33 668 668 HOH HOH . F 3 HOH D 34 671 671 HOH HOH . F 3 HOH D 35 688 688 HOH HOH . F 3 HOH D 36 689 689 HOH HOH . F 3 HOH D 37 697 697 HOH HOH . F 3 HOH D 38 698 698 HOH HOH . F 3 HOH D 39 741 741 HOH HOH . F 3 HOH D 40 764 764 HOH HOH . F 3 HOH D 41 802 802 HOH HOH . F 3 HOH D 42 830 830 HOH HOH . F 3 HOH D 43 926 926 HOH HOH . F 3 HOH D 44 931 931 HOH HOH . F 3 HOH D 45 933 933 HOH HOH . F 3 HOH D 46 944 944 HOH HOH . F 3 HOH D 47 951 951 HOH HOH . F 3 HOH D 48 952 952 HOH HOH . F 3 HOH D 49 968 968 HOH HOH . F 3 HOH D 50 1071 1071 HOH HOH . F 3 HOH D 51 1076 1076 HOH HOH . F 3 HOH D 52 1236 1236 HOH HOH . F 3 HOH D 53 1241 1241 HOH HOH . F 3 HOH D 54 1313 1313 HOH HOH . F 3 HOH D 55 1322 1322 HOH HOH . F 3 HOH D 56 1343 1343 HOH HOH . F 3 HOH D 57 1390 1390 HOH HOH . F 3 HOH D 58 1480 1480 HOH HOH . F 3 HOH D 59 1483 1483 HOH HOH . F 3 HOH D 60 1493 1493 HOH HOH . F 3 HOH D 61 1505 1505 HOH HOH . F 3 HOH D 62 1512 1512 HOH HOH . F 3 HOH D 63 1517 1517 HOH HOH . F 3 HOH D 64 1554 1554 HOH HOH . F 3 HOH D 65 1564 1564 HOH HOH . F 3 HOH D 66 1565 1565 HOH HOH . F 3 HOH D 67 1567 1567 HOH HOH . F 3 HOH D 68 1576 1576 HOH HOH . F 3 HOH D 69 1577 1577 HOH HOH . F 3 HOH D 70 1596 1596 HOH HOH . F 3 HOH D 71 1600 1600 HOH HOH . F 3 HOH D 72 1612 1612 HOH HOH . F 3 HOH D 73 1617 1617 HOH HOH . F 3 HOH D 74 1651 1651 HOH HOH . F 3 HOH D 75 1653 1653 HOH HOH . F 3 HOH D 76 1728 1728 HOH HOH . F 3 HOH D 77 1735 1735 HOH HOH . F 3 HOH D 78 1780 1780 HOH HOH . F 3 HOH D 79 1782 1782 HOH HOH . F 3 HOH D 80 1786 1786 HOH HOH . F 3 HOH D 81 1796 1796 HOH HOH . F 3 HOH D 82 1798 1798 HOH HOH . F 3 HOH D 83 1800 1800 HOH HOH . F 3 HOH D 84 1809 1809 HOH HOH . F 3 HOH D 85 1845 1845 HOH HOH . F 3 HOH D 86 1881 1881 HOH HOH . F 3 HOH D 87 1948 1948 HOH HOH . F 3 HOH D 88 1951 1951 HOH HOH . F 3 HOH D 89 1965 1965 HOH HOH . F 3 HOH D 90 1997 1997 HOH HOH . F 3 HOH D 91 1998 1998 HOH HOH . F 3 HOH D 92 2021 2021 HOH HOH . F 3 HOH D 93 2024 2024 HOH HOH . F 3 HOH D 94 2033 2033 HOH HOH . F 3 HOH D 95 2048 2048 HOH HOH . F 3 HOH D 96 2075 2075 HOH HOH . F 3 HOH D 97 2112 2112 HOH HOH . F 3 HOH D 98 2144 2144 HOH HOH . F 3 HOH D 99 2151 2151 HOH HOH . F 3 HOH D 100 2167 2167 HOH HOH . F 3 HOH D 101 2172 2172 HOH HOH . F 3 HOH D 102 2179 2179 HOH HOH . F 3 HOH D 103 2186 2186 HOH HOH . F 3 HOH D 104 2189 2189 HOH HOH . F 3 HOH D 105 2190 2190 HOH HOH . F 3 HOH D 106 2191 2191 HOH HOH . F 3 HOH D 107 2208 2208 HOH HOH . F 3 HOH D 108 2209 2209 HOH HOH . F 3 HOH D 109 2227 2227 HOH HOH . F 3 HOH D 110 2235 2235 HOH HOH . F 3 HOH D 111 2236 2236 HOH HOH . F 3 HOH D 112 2257 2257 HOH HOH . F 3 HOH D 113 2274 2274 HOH HOH . F 3 HOH D 114 2286 2286 HOH HOH . F 3 HOH D 115 2287 2287 HOH HOH . F 3 HOH D 116 2292 2292 HOH HOH . F 3 HOH D 117 2297 2297 HOH HOH . F 3 HOH D 118 2298 2298 HOH HOH . F 3 HOH D 119 2299 2299 HOH HOH . F 3 HOH D 120 2300 2300 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 BTN . . . D 2 22.554 3.262 16.883 1 13.82 ? C11 BTN 300 D 1 HETATM 2 O O11 BTN . . . D 2 23.75 3.159 16.694 1 14.1 ? O11 BTN 300 D 1 HETATM 3 O O12 BTN . . . D 2 21.816 2.337 17.169 1 13.25 ? O12 BTN 300 D 1 HETATM 4 C C10 BTN . . . D 2 21.932 4.66 16.774 1 13.26 ? C10 BTN 300 D 1 HETATM 5 C C9 BTN . . . D 2 20.498 4.664 16.211 1 12.94 ? C9 BTN 300 D 1 HETATM 6 C C8 BTN . . . D 2 20.465 4.149 14.775 1 12.21 ? C8 BTN 300 D 1 HETATM 7 C C7 BTN . . . D 2 19.07 4.365 14.167 1 13.56 ? C7 BTN 300 D 1 HETATM 8 C C2 BTN . . . D 2 19.117 4 12.631 1 14.52 ? C2 BTN 300 D 1 HETATM 9 S S1 BTN . . . D 2 19.83 5.264 11.519 1.31 18.34 ? S1 BTN 300 D 1 HETATM 10 C C6 BTN . . . D 2 19.089 4.384 10.12 1 15.26 ? C6 BTN 300 D 1 HETATM 11 C C5 BTN . . . D 2 17.765 3.77 10.518 1 14.26 ? C5 BTN 300 D 1 HETATM 12 N N1 BTN . . . D 2 16.76 4.773 10.286 1 13.58 ? N1 BTN 300 D 1 HETATM 13 C C3 BTN . . . D 2 16.174 5.183 11.414 1 12.25 ? C3 BTN 300 D 1 HETATM 14 O O3 BTN . . . D 2 15.24 5.979 11.487 1 13.24 ? O3 BTN 300 D 1 HETATM 15 N N2 BTN . . . D 2 16.742 4.608 12.463 1 12.96 ? N2 BTN 300 D 1 HETATM 16 C C4 BTN . . . D 2 17.728 3.617 12.076 1 14.52 ? C4 BTN 300 D 1 HETATM 17 H H101 BTN . . . D 2 21.922 5.098 17.761 1 13.02 ? H101 BTN 300 D 1 HETATM 18 H H102 BTN . . . D 2 22.564 5.268 16.146 1 12.86 ? H102 BTN 300 D 1 HETATM 19 H H91 BTN . . . D 2 19.863 4.055 16.836 1 11.66 ? H91 BTN 300 D 1 HETATM 20 H H92 BTN . . . D 2 20.121 5.675 16.242 1 12.07 ? H92 BTN 300 D 1 HETATM 21 H H81 BTN . . . D 2 21.197 4.679 14.185 1 11.94 ? H81 BTN 300 D 1 HETATM 22 H H82 BTN . . . D 2 20.704 3.097 14.766 1 12.04 ? H82 BTN 300 D 1 HETATM 23 H H71 BTN . . . D 2 18.359 3.734 14.681 1 11.89 ? H71 BTN 300 D 1 HETATM 24 H H72 BTN . . . D 2 18.773 5.397 14.287 1 11.82 ? H72 BTN 300 D 1 HETATM 25 H H2 BTN . . . D 2 19.736 3.126 12.525 1 15.65 ? H2 BTN 300 D 1 HETATM 26 H H61 BTN . . . D 2 19.778 3.625 9.795 1 15.82 ? H61 BTN 300 D 1 HETATM 27 H H62 BTN . . . D 2 18.947 5.094 9.319 1 16.96 ? H62 BTN 300 D 1 HETATM 28 H H5 BTN . . . D 2 17.527 2.864 9.98 1 14.68 ? H5 BTN 300 D 1 HETATM 29 H HN1 BTN . . . D 2 16.572 5.086 9.389 1 13.45 ? HN1 BTN 300 D 1 HETATM 30 H HN2 BTN . . . D 2 16.528 4.822 13.403 1 14.07 ? HN2 BTN 300 D 1 HETATM 31 H H4 BTN . . . D 2 17.41 2.63 12.378 1 14.81 ? H4 BTN 300 D 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 31 #