data_2J1P # _model_server_result.job_id JE3tZXFgJ5p_ckK9YEwRrQ _model_server_result.datetime_utc '2024-11-15 07:05:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2j1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1305}' # _entry.id 2J1P # _exptl.entry_id 2J1P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.89 _cell.angle_gamma 90 _cell.entry_id 2J1P _cell.length_a 53.803 _cell.length_b 91.551 _cell.length_c 56.286 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 43 A ALA 43 1_555 A N MSE 44 A MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C MSE 44 A MSE 44 1_555 A N ARG 45 A ARG 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 A C ALA 74 A ALA 74 1_555 A N MSE 75 A MSE 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C MSE 75 A MSE 75 1_555 A N PRO 76 A PRO 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.35 ? covale ? covale5 A C GLU 82 A GLU 82 1_555 A N MSE 83 A MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale6 A C MSE 83 A MSE 83 1_555 A N ILE 84 A ILE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.307 ? covale ? covale7 A C THR 86 A THR 86 1_555 A N MSE 87 A MSE 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale8 A C MSE 87 A MSE 87 1_555 A N SER 88 A SER 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 A C CYS 96 A CYS 96 1_555 A N MSE 97 A MSE 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale10 A C MSE 97 A MSE 97 1_555 A N ASP 98 A ASP 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale11 A C LEU 249 A LEU 263 1_555 A N MSE 250 A MSE 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C MSE 250 A MSE 264 1_555 A N GLY 251 A GLY 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale13 B C ALA 43 B ALA 43 1_555 B N MSE 44 B MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale14 B C MSE 44 B MSE 44 1_555 B N ARG 45 B ARG 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale15 B C ALA 74 B ALA 74 1_555 B N MSE 75 B MSE 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale16 B C MSE 75 B MSE 75 1_555 B N PRO 76 B PRO 76 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale17 B C GLU 82 B GLU 82 1_555 B N MSE 83 B MSE 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale18 B C MSE 83 B MSE 83 1_555 B N ILE 84 B ILE 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale19 B C THR 86 B THR 86 1_555 B N MSE 87 B MSE 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale20 B C MSE 87 B MSE 87 1_555 B N SER 88 B SER 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale21 B C CYS 96 B CYS 96 1_555 B N MSE 97 B MSE 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale22 B C MSE 97 B MSE 97 1_555 B N ASP 98 B ASP 98 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale23 B C LEU 249 B LEU 263 1_555 B N MSE 250 B MSE 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale24 B C MSE 250 B MSE 264 1_555 B N GLY 251 B GLY 265 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2J1P _atom_sites.fract_transf_matrix[1][1] 0.018586 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002246 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017896 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GRG A 1 1308 1308 GRG GRG . D 3 PGO B 1 1303 1303 PGO PGO . E 3 PGO B 1 1304 1304 PGO PGO . F 4 BME B 1 1305 1305 BME BME . G 4 BME B 1 1306 1306 BME BME . H 5 HOH A 1 2001 2001 HOH HOH . H 5 HOH A 2 2002 2002 HOH HOH . H 5 HOH A 3 2003 2003 HOH HOH . H 5 HOH A 4 2004 2004 HOH HOH . H 5 HOH A 5 2005 2005 HOH HOH . H 5 HOH A 6 2006 2006 HOH HOH . H 5 HOH A 7 2007 2007 HOH HOH . H 5 HOH A 8 2008 2008 HOH HOH . H 5 HOH A 9 2009 2009 HOH HOH . H 5 HOH A 10 2010 2010 HOH HOH . H 5 HOH A 11 2011 2011 HOH HOH . H 5 HOH A 12 2012 2012 HOH HOH . H 5 HOH A 13 2013 2013 HOH HOH . H 5 HOH A 14 2014 2014 HOH HOH . H 5 HOH A 15 2015 2015 HOH HOH . H 5 HOH A 16 2016 2016 HOH HOH . H 5 HOH A 17 2017 2017 HOH HOH . H 5 HOH A 18 2018 2018 HOH HOH . H 5 HOH A 19 2019 2019 HOH HOH . H 5 HOH A 20 2020 2020 HOH HOH . H 5 HOH A 21 2021 2021 HOH HOH . H 5 HOH A 22 2022 2022 HOH HOH . H 5 HOH A 23 2023 2023 HOH HOH . H 5 HOH A 24 2024 2024 HOH HOH . H 5 HOH A 25 2025 2025 HOH HOH . H 5 HOH A 26 2026 2026 HOH HOH . H 5 HOH A 27 2027 2027 HOH HOH . H 5 HOH A 28 2028 2028 HOH HOH . H 5 HOH A 29 2029 2029 HOH HOH . H 5 HOH A 30 2030 2030 HOH HOH . H 5 HOH A 31 2031 2031 HOH HOH . H 5 HOH A 32 2032 2032 HOH HOH . H 5 HOH A 33 2033 2033 HOH HOH . H 5 HOH A 34 2034 2034 HOH HOH . H 5 HOH A 35 2035 2035 HOH HOH . H 5 HOH A 36 2036 2036 HOH HOH . H 5 HOH A 37 2037 2037 HOH HOH . H 5 HOH A 38 2038 2038 HOH HOH . H 5 HOH A 39 2039 2039 HOH HOH . H 5 HOH A 40 2040 2040 HOH HOH . H 5 HOH A 41 2041 2041 HOH HOH . H 5 HOH A 42 2042 2042 HOH HOH . H 5 HOH A 43 2043 2043 HOH HOH . H 5 HOH A 44 2044 2044 HOH HOH . H 5 HOH A 45 2045 2045 HOH HOH . H 5 HOH A 46 2046 2046 HOH HOH . H 5 HOH A 47 2047 2047 HOH HOH . H 5 HOH A 48 2048 2048 HOH HOH . H 5 HOH A 49 2049 2049 HOH HOH . H 5 HOH A 50 2050 2050 HOH HOH . H 5 HOH A 51 2051 2051 HOH HOH . H 5 HOH A 52 2052 2052 HOH HOH . H 5 HOH A 53 2053 2053 HOH HOH . H 5 HOH A 54 2054 2054 HOH HOH . H 5 HOH A 55 2055 2055 HOH HOH . H 5 HOH A 56 2056 2056 HOH HOH . H 5 HOH A 57 2057 2057 HOH HOH . H 5 HOH A 58 2058 2058 HOH HOH . H 5 HOH A 59 2059 2059 HOH HOH . H 5 HOH A 60 2060 2060 HOH HOH . H 5 HOH A 61 2061 2061 HOH HOH . H 5 HOH A 62 2062 2062 HOH HOH . H 5 HOH A 63 2063 2063 HOH HOH . H 5 HOH A 64 2064 2064 HOH HOH . H 5 HOH A 65 2065 2065 HOH HOH . H 5 HOH A 66 2066 2066 HOH HOH . H 5 HOH A 67 2067 2067 HOH HOH . H 5 HOH A 68 2068 2068 HOH HOH . H 5 HOH A 69 2069 2069 HOH HOH . H 5 HOH A 70 2070 2070 HOH HOH . H 5 HOH A 71 2071 2071 HOH HOH . H 5 HOH A 72 2072 2072 HOH HOH . H 5 HOH A 73 2073 2073 HOH HOH . H 5 HOH A 74 2074 2074 HOH HOH . H 5 HOH A 75 2075 2075 HOH HOH . H 5 HOH A 76 2076 2076 HOH HOH . H 5 HOH A 77 2077 2077 HOH HOH . H 5 HOH A 78 2078 2078 HOH HOH . H 5 HOH A 79 2079 2079 HOH HOH . H 5 HOH A 80 2080 2080 HOH HOH . I 5 HOH B 1 2001 2001 HOH HOH . I 5 HOH B 2 2002 2002 HOH HOH . I 5 HOH B 3 2003 2003 HOH HOH . I 5 HOH B 4 2004 2004 HOH HOH . I 5 HOH B 5 2005 2005 HOH HOH . I 5 HOH B 6 2006 2006 HOH HOH . I 5 HOH B 7 2007 2007 HOH HOH . I 5 HOH B 8 2008 2008 HOH HOH . I 5 HOH B 9 2009 2009 HOH HOH . I 5 HOH B 10 2010 2010 HOH HOH . I 5 HOH B 11 2011 2011 HOH HOH . I 5 HOH B 12 2012 2012 HOH HOH . I 5 HOH B 13 2013 2013 HOH HOH . I 5 HOH B 14 2014 2014 HOH HOH . I 5 HOH B 15 2015 2015 HOH HOH . I 5 HOH B 16 2016 2016 HOH HOH . I 5 HOH B 17 2017 2017 HOH HOH . I 5 HOH B 18 2018 2018 HOH HOH . I 5 HOH B 19 2019 2019 HOH HOH . I 5 HOH B 20 2020 2020 HOH HOH . I 5 HOH B 21 2021 2021 HOH HOH . I 5 HOH B 22 2022 2022 HOH HOH . I 5 HOH B 23 2023 2023 HOH HOH . I 5 HOH B 24 2024 2024 HOH HOH . I 5 HOH B 25 2025 2025 HOH HOH . I 5 HOH B 26 2026 2026 HOH HOH . I 5 HOH B 27 2027 2027 HOH HOH . I 5 HOH B 28 2028 2028 HOH HOH . I 5 HOH B 29 2029 2029 HOH HOH . I 5 HOH B 30 2030 2030 HOH HOH . I 5 HOH B 31 2031 2031 HOH HOH . I 5 HOH B 32 2032 2032 HOH HOH . I 5 HOH B 33 2033 2033 HOH HOH . I 5 HOH B 34 2034 2034 HOH HOH . I 5 HOH B 35 2035 2035 HOH HOH . I 5 HOH B 36 2036 2036 HOH HOH . I 5 HOH B 37 2037 2037 HOH HOH . I 5 HOH B 38 2038 2038 HOH HOH . I 5 HOH B 39 2039 2039 HOH HOH . I 5 HOH B 40 2040 2040 HOH HOH . I 5 HOH B 41 2041 2041 HOH HOH . I 5 HOH B 42 2042 2042 HOH HOH . I 5 HOH B 43 2043 2043 HOH HOH . I 5 HOH B 44 2044 2044 HOH HOH . I 5 HOH B 45 2045 2045 HOH HOH . I 5 HOH B 46 2046 2046 HOH HOH . I 5 HOH B 47 2047 2047 HOH HOH . I 5 HOH B 48 2048 2048 HOH HOH . I 5 HOH B 49 2049 2049 HOH HOH . I 5 HOH B 50 2050 2050 HOH HOH . I 5 HOH B 51 2051 2051 HOH HOH . I 5 HOH B 52 2052 2052 HOH HOH . I 5 HOH B 53 2053 2053 HOH HOH . I 5 HOH B 54 2054 2054 HOH HOH . I 5 HOH B 55 2055 2055 HOH HOH . I 5 HOH B 56 2056 2056 HOH HOH . I 5 HOH B 57 2057 2057 HOH HOH . I 5 HOH B 58 2058 2058 HOH HOH . I 5 HOH B 59 2059 2059 HOH HOH . I 5 HOH B 60 2060 2060 HOH HOH . I 5 HOH B 61 2061 2061 HOH HOH . I 5 HOH B 62 2062 2062 HOH HOH . I 5 HOH B 63 2063 2063 HOH HOH . I 5 HOH B 64 2064 2064 HOH HOH . I 5 HOH B 65 2065 2065 HOH HOH . I 5 HOH B 66 2066 2066 HOH HOH . I 5 HOH B 67 2067 2067 HOH HOH . I 5 HOH B 68 2068 2068 HOH HOH . I 5 HOH B 69 2069 2069 HOH HOH . I 5 HOH B 70 2070 2070 HOH HOH . I 5 HOH B 71 2071 2071 HOH HOH . I 5 HOH B 72 2072 2072 HOH HOH . I 5 HOH B 73 2073 2073 HOH HOH . I 5 HOH B 74 2074 2074 HOH HOH . I 5 HOH B 75 2075 2075 HOH HOH . I 5 HOH B 76 2076 2076 HOH HOH . I 5 HOH B 77 2077 2077 HOH HOH . I 5 HOH B 78 2078 2078 HOH HOH . I 5 HOH B 79 2079 2079 HOH HOH . I 5 HOH B 80 2080 2080 HOH HOH . I 5 HOH B 81 2081 2081 HOH HOH . I 5 HOH B 82 2082 2082 HOH HOH . I 5 HOH B 83 2083 2083 HOH HOH . I 5 HOH B 84 2084 2084 HOH HOH . I 5 HOH B 85 2085 2085 HOH HOH . I 5 HOH B 86 2086 2086 HOH HOH . I 5 HOH B 87 2087 2087 HOH HOH . I 5 HOH B 88 2088 2088 HOH HOH . I 5 HOH B 89 2089 2089 HOH HOH . I 5 HOH B 90 2090 2090 HOH HOH . I 5 HOH B 91 2091 2091 HOH HOH . I 5 HOH B 92 2092 2092 HOH HOH . I 5 HOH B 93 2093 2093 HOH HOH . I 5 HOH B 94 2094 2094 HOH HOH . I 5 HOH B 95 2095 2095 HOH HOH . I 5 HOH B 96 2096 2096 HOH HOH . I 5 HOH B 97 2097 2097 HOH HOH . I 5 HOH B 98 2098 2098 HOH HOH . I 5 HOH B 99 2099 2099 HOH HOH . I 5 HOH B 100 2100 2100 HOH HOH . I 5 HOH B 101 2101 2101 HOH HOH . I 5 HOH B 102 2102 2102 HOH HOH . I 5 HOH B 103 2103 2103 HOH HOH . I 5 HOH B 104 2104 2104 HOH HOH . I 5 HOH B 105 2105 2105 HOH HOH . I 5 HOH B 106 2106 2106 HOH HOH . I 5 HOH B 107 2107 2107 HOH HOH . I 5 HOH B 108 2108 2108 HOH HOH . I 5 HOH B 109 2109 2109 HOH HOH . I 5 HOH B 110 2110 2110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . F 4 22.69 6.99 19.34 1 41.81 ? C1 BME 1305 B 1 HETATM 2 C C2 BME . . . F 4 23.082 8.14 20.293 1 41.77 ? C2 BME 1305 B 1 HETATM 3 O O1 BME . . . F 4 21.29 6.915 18.995 1 31.6 ? O1 BME 1305 B 1 HETATM 4 S S2 BME . . . F 4 23.617 7.73 22.003 1 45.95 ? S2 BME 1305 B 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 60 _model_server_stats.query_time_ms 428 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #