data_2J3N # _model_server_result.job_id 0bqhFc2GmdP9A1spuWG0Lg _model_server_result.datetime_utc '2025-06-23 04:57:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2j3n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":600}' # _entry.id 2J3N # _exptl.entry_id 2J3N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.46 _cell.angle_gamma 90 _cell.entry_id 2J3N _cell.length_a 144.63 _cell.length_b 90.64 _cell.length_c 166.6 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J3N _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS dimeric 2 author_and_software_defined_assembly 1 PQS dimeric 2 author_and_software_defined_assembly 2 PQS dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,M,X,Y 1 1 C,D,N,O,P,Q,R,Z,AA 2 1 E,F,S,T,U,V,W,BA,CA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 J N N ? 2 N N N ? 2 P N N ? 2 S N N ? 2 U N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 79 A CYS 59 1_555 A SG CYS 84 A CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 B SG CYS 79 B CYS 59 1_555 B SG CYS 84 B CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf3 C SG CYS 79 C CYS 59 1_555 C SG CYS 84 C CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf4 D SG CYS 79 D CYS 59 1_555 D SG CYS 84 D CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf5 E SG CYS 79 E CYS 59 1_555 E SG CYS 84 E CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf6 E SG CYS 517 E CYS 497 1_555 E SG CYS 518 E CYS 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf7 F SG CYS 79 F CYS 59 1_555 F SG CYS 84 F CYS 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2J3N _atom_sites.fract_transf_matrix[1][1] 0.006914 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002858 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011033 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006495 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 FAD A 1 600 600 FAD FAD . H 3 NAP A 1 601 601 NAP NAP . I 4 MPD A 1 701 701 MPD MPD . J 2 FAD B 1 600 600 FAD FAD . K 3 NAP B 1 601 601 NAP NAP . L 4 MPD B 1 700 700 MPD MPD . M 4 MPD B 1 701 701 MPD MPD . N 2 FAD C 1 600 600 FAD FAD . O 3 NAP C 1 601 601 NAP NAP . P 2 FAD D 1 600 600 FAD FAD . Q 3 NAP D 1 601 601 NAP NAP . R 4 MPD D 1 700 700 MPD MPD . S 2 FAD E 1 600 600 FAD FAD . T 3 NAP E 1 601 601 NAP NAP . U 2 FAD F 1 600 600 FAD FAD . V 3 NAP F 1 601 601 NAP NAP . W 4 MPD F 1 700 700 MPD MPD . X 5 HOH A 1 2001 2001 HOH HOH . X 5 HOH A 2 2002 2002 HOH HOH . X 5 HOH A 3 2003 2003 HOH HOH . X 5 HOH A 4 2004 2004 HOH HOH . X 5 HOH A 5 2005 2005 HOH HOH . X 5 HOH A 6 2006 2006 HOH HOH . X 5 HOH A 7 2007 2007 HOH HOH . X 5 HOH A 8 2008 2008 HOH HOH . X 5 HOH A 9 2009 2009 HOH HOH . Y 5 HOH B 1 2001 2001 HOH HOH . Y 5 HOH B 2 2002 2002 HOH HOH . Y 5 HOH B 3 2003 2003 HOH HOH . Y 5 HOH B 4 2004 2004 HOH HOH . Y 5 HOH B 5 2005 2005 HOH HOH . Y 5 HOH B 6 2006 2006 HOH HOH . Y 5 HOH B 7 2007 2007 HOH HOH . Y 5 HOH B 8 2008 2008 HOH HOH . Y 5 HOH B 9 2009 2009 HOH HOH . Z 5 HOH C 1 2001 2001 HOH HOH . Z 5 HOH C 2 2002 2002 HOH HOH . Z 5 HOH C 3 2003 2003 HOH HOH . Z 5 HOH C 4 2004 2004 HOH HOH . Z 5 HOH C 5 2005 2005 HOH HOH . Z 5 HOH C 6 2006 2006 HOH HOH . Z 5 HOH C 7 2007 2007 HOH HOH . AA 5 HOH D 1 2001 2001 HOH HOH . AA 5 HOH D 2 2002 2002 HOH HOH . AA 5 HOH D 3 2003 2003 HOH HOH . AA 5 HOH D 4 2004 2004 HOH HOH . AA 5 HOH D 5 2005 2005 HOH HOH . AA 5 HOH D 6 2006 2006 HOH HOH . AA 5 HOH D 7 2007 2007 HOH HOH . AA 5 HOH D 8 2008 2008 HOH HOH . BA 5 HOH E 1 2001 2001 HOH HOH . BA 5 HOH E 2 2002 2002 HOH HOH . BA 5 HOH E 3 2003 2003 HOH HOH . BA 5 HOH E 4 2004 2004 HOH HOH . CA 5 HOH F 1 2001 2001 HOH HOH . CA 5 HOH F 2 2002 2002 HOH HOH . CA 5 HOH F 3 2003 2003 HOH HOH . CA 5 HOH F 4 2004 2004 HOH HOH . CA 5 HOH F 5 2005 2005 HOH HOH . CA 5 HOH F 6 2006 2006 HOH HOH . CA 5 HOH F 7 2007 2007 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . G 2 -61.903 82.27 52.135 1 42.92 ? PA FAD 600 A 1 HETATM 2 O O1A FAD . . . G 2 -62.421 83.554 52.647 1 42.54 ? O1A FAD 600 A 1 HETATM 3 O O2A FAD . . . G 2 -62.367 81.361 51.044 1 44.14 ? O2A FAD 600 A 1 HETATM 4 O O5B FAD . . . G 2 -60.314 82.169 52.516 1 44.27 ? O5B FAD 600 A 1 HETATM 5 C C5B FAD . . . G 2 -59.397 81.086 52.125 1 43.07 ? C5B FAD 600 A 1 HETATM 6 C C4B FAD . . . G 2 -58.936 80.003 53.167 1 40.31 ? C4B FAD 600 A 1 HETATM 7 O O4B FAD . . . G 2 -57.667 80.254 53.849 1 38.44 ? O4B FAD 600 A 1 HETATM 8 C C3B FAD . . . G 2 -59.895 79.462 54.265 1 40.01 ? C3B FAD 600 A 1 HETATM 9 O O3B FAD . . . G 2 -60.084 78.043 54.175 1 40.36 ? O3B FAD 600 A 1 HETATM 10 C C2B FAD . . . G 2 -59.22 79.918 55.575 1 38.21 ? C2B FAD 600 A 1 HETATM 11 O O2B FAD . . . G 2 -59.57 79.266 56.764 1 35.12 ? O2B FAD 600 A 1 HETATM 12 C C1B FAD . . . G 2 -57.786 79.764 55.234 1 40.11 ? C1B FAD 600 A 1 HETATM 13 N N9A FAD . . . G 2 -56.796 80.443 56.107 1 42.31 ? N9A FAD 600 A 1 HETATM 14 C C8A FAD . . . G 2 -56.962 81.472 57.001 1 44.13 ? C8A FAD 600 A 1 HETATM 15 N N7A FAD . . . G 2 -55.854 81.838 57.619 1 44.4 ? N7A FAD 600 A 1 HETATM 16 C C5A FAD . . . G 2 -54.892 80.989 57.09 1 44.25 ? C5A FAD 600 A 1 HETATM 17 C C6A FAD . . . G 2 -53.461 80.862 57.329 1 46.07 ? C6A FAD 600 A 1 HETATM 18 N N6A FAD . . . G 2 -52.806 81.654 58.204 1 47.84 ? N6A FAD 600 A 1 HETATM 19 N N1A FAD . . . G 2 -52.775 79.901 56.63 1 45.05 ? N1A FAD 600 A 1 HETATM 20 C C2A FAD . . . G 2 -53.465 79.116 55.754 1 43.97 ? C2A FAD 600 A 1 HETATM 21 N N3A FAD . . . G 2 -54.779 79.151 55.459 1 42.92 ? N3A FAD 600 A 1 HETATM 22 C C4A FAD . . . G 2 -55.445 80.143 56.189 1 42.47 ? C4A FAD 600 A 1 HETATM 23 N N1 FAD . . . G 2 -70.103 85.077 48.319 1 28.55 ? N1 FAD 600 A 1 HETATM 24 C C2 FAD . . . G 2 -70.706 85.117 47.111 1 28.29 ? C2 FAD 600 A 1 HETATM 25 O O2 FAD . . . G 2 -70.1 85.555 46.089 1 29.6 ? O2 FAD 600 A 1 HETATM 26 N N3 FAD . . . G 2 -72.034 84.646 46.982 1 25.77 ? N3 FAD 600 A 1 HETATM 27 C C4 FAD . . . G 2 -72.806 84.147 48.045 1 28.11 ? C4 FAD 600 A 1 HETATM 28 O O4 FAD . . . G 2 -73.988 83.746 47.857 1 26.19 ? O4 FAD 600 A 1 HETATM 29 C C4X FAD . . . G 2 -72.155 84.135 49.3 1 29.39 ? C4X FAD 600 A 1 HETATM 30 N N5 FAD . . . G 2 -72.859 83.652 50.431 1 29.76 ? N5 FAD 600 A 1 HETATM 31 C C5X FAD . . . G 2 -72.189 83.632 51.646 1 30.74 ? C5X FAD 600 A 1 HETATM 32 C C6 FAD . . . G 2 -72.869 83.148 52.812 1 31.62 ? C6 FAD 600 A 1 HETATM 33 C C7 FAD . . . G 2 -72.258 83.101 54.046 1 28.24 ? C7 FAD 600 A 1 HETATM 34 C C7M FAD . . . G 2 -73.076 82.572 55.202 1 27.75 ? C7M FAD 600 A 1 HETATM 35 C C8 FAD . . . G 2 -70.918 83.532 54.196 1 30.49 ? C8 FAD 600 A 1 HETATM 36 C C8M FAD . . . G 2 -70.169 83.514 55.517 1 32.91 ? C8M FAD 600 A 1 HETATM 37 C C9 FAD . . . G 2 -70.214 84.021 53.04 1 30.83 ? C9 FAD 600 A 1 HETATM 38 C C9A FAD . . . G 2 -70.818 84.082 51.778 1 30.19 ? C9A FAD 600 A 1 HETATM 39 N N10 FAD . . . G 2 -70.131 84.573 50.619 1 29.85 ? N10 FAD 600 A 1 HETATM 40 C C10 FAD . . . G 2 -70.796 84.599 49.391 1 29.05 ? C10 FAD 600 A 1 HETATM 41 C C1' FAD . . . G 2 -68.725 85.066 50.741 1 32.82 ? C1' FAD 600 A 1 HETATM 42 C C2' FAD . . . G 2 -67.617 84.352 49.972 1 33 ? C2' FAD 600 A 1 HETATM 43 O O2' FAD . . . G 2 -67.613 82.989 50.34 1 34.72 ? O2' FAD 600 A 1 HETATM 44 C C3' FAD . . . G 2 -66.293 85.054 50.29 1 33.85 ? C3' FAD 600 A 1 HETATM 45 O O3' FAD . . . G 2 -66.415 86.434 49.887 1 30.6 ? O3' FAD 600 A 1 HETATM 46 C C4' FAD . . . G 2 -65.067 84.439 49.548 1 34.98 ? C4' FAD 600 A 1 HETATM 47 O O4' FAD . . . G 2 -64.941 83.072 49.949 1 32.17 ? O4' FAD 600 A 1 HETATM 48 C C5' FAD . . . G 2 -63.818 85.207 49.935 1 37.73 ? C5' FAD 600 A 1 HETATM 49 O O5' FAD . . . G 2 -62.656 84.769 49.233 1 40.22 ? O5' FAD 600 A 1 HETATM 50 P P FAD . . . G 2 -61.276 84.434 49.941 1 41.7 ? P FAD 600 A 1 HETATM 51 O O1P FAD . . . G 2 -60.354 84.157 48.825 1 41.53 ? O1P FAD 600 A 1 HETATM 52 O O2P FAD . . . G 2 -60.96 85.549 50.876 1 44.91 ? O2P FAD 600 A 1 HETATM 53 O O3P FAD . . . G 2 -61.39 83.017 50.772 1 41.96 ? O3P FAD 600 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #