data_2J4L # _model_server_result.job_id QyfPC9TT2xd_OKDbNosJ2w _model_server_result.datetime_utc '2025-09-12 22:53:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2j4l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":1228}' # _entry.id 2J4L # _exptl.entry_id 2J4L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.56 _cell.angle_gamma 90 _cell.entry_id 2J4L _cell.length_a 224.75 _cell.length_b 79.03 _cell.length_c 223.47 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J4L _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS hexameric 6 author_and_software_defined_assembly 1 PQS hexameric 6 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,M,N,O,P,Q,R,S,T,U,V 1 1 G,H,I,J,K,L,W,X,Y,Z,AA,BA,CA,DA,EA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 O N N ? 3 Q N N ? 3 S N N ? 3 U N N ? 3 Z N N ? 3 BA N N ? 3 EA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 N O1A UTP . B UTP 1227 1_555 O MG MG . B MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.917 ? metalc ? metalc2 N O3A UTP . B UTP 1227 1_555 O MG MG . B MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.729 ? metalc ? metalc3 C NH2 ARG 48 C ARG 48 1_555 Q MG MG . C MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.718 ? metalc ? metalc4 P O3B UTP . C UTP 1227 1_555 Q MG MG . C MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? metalc ? metalc5 P O1A UTP . C UTP 1227 1_555 Q MG MG . C MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.059 ? metalc ? metalc6 R O3A UTP . D UTP 1227 1_555 S MG MG . D MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc7 R O1B UTP . D UTP 1227 1_555 S MG MG . D MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc8 T O3A UTP . E UTP 1227 1_555 U MG MG . E MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.104 ? metalc ? metalc9 T O3B UTP . E UTP 1227 1_555 U MG MG . E MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.896 ? metalc ? metalc10 T O1A UTP . E UTP 1227 1_555 U MG MG . E MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.983 ? metalc ? metalc11 AA O3A UTP . J UTP 1227 1_555 BA MG MG . J MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc12 AA O2B UTP . J UTP 1227 1_555 BA MG MG . J MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc13 DA O1A UTP . L UTP 1227 1_555 EA MG MG . L MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? metalc ? metalc14 DA O5' UTP . L UTP 1227 1_555 EA MG MG . L MG 1228 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.966 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2J4L _atom_sites.fract_transf_matrix[1][1] 0.004449 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000512 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012653 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004504 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 2 UTP A 1 1227 1227 UTP UTP . N 2 UTP B 1 1227 1227 UTP UTP . O 3 MG B 1 1228 1228 MG MG . P 2 UTP C 1 1227 1227 UTP UTP . Q 3 MG C 1 1228 1228 MG MG . R 2 UTP D 1 1227 1227 UTP UTP . S 3 MG D 1 1228 1228 MG MG . T 2 UTP E 1 1227 1227 UTP UTP . U 3 MG E 1 1228 1228 MG MG . V 2 UTP F 1 1227 1227 UTP UTP . W 2 UTP G 1 1227 1227 UTP UTP . X 2 UTP H 1 1227 1227 UTP UTP . Y 2 UTP I 1 1227 1227 UTP UTP . Z 3 MG I 1 1228 1228 MG MG . AA 2 UTP J 1 1227 1227 UTP UTP . BA 3 MG J 1 1228 1228 MG MG . CA 2 UTP K 1 1227 1227 UTP UTP . DA 2 UTP L 1 1227 1227 UTP UTP . EA 3 MG L 1 1228 1228 MG MG . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id BA _atom_site.label_entity_id 3 _atom_site.Cartn_x 20.593 _atom_site.Cartn_y 24.296 _atom_site.Cartn_z -61.423 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1228 _atom_site.auth_asym_id J _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #