data_2J6K
#
_model_server_result.job_id            7rGlWp1PXDvuonMFy-RF6w 
_model_server_result.datetime_utc      '2025-02-05 17:06:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2j6k 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"M","auth_seq_id":1059}' 
#
_entry.id    2J6K 
#
_exptl.entry_id    2J6K 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2J6K 
_cell.length_a            120.018 
_cell.length_b            120.018 
_cell.length_c            153.93 
_cell.Z_PDB               96 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2J6K 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        79 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 4' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS monomeric 1 author_and_software_defined_assembly 1 
PQS monomeric 1 author_and_software_defined_assembly 2 
PQS monomeric 1 author_and_software_defined_assembly 3 
PQS monomeric 1 author_and_software_defined_assembly 4 
PQS monomeric 1 author_and_software_defined_assembly 5 
PQS monomeric 1 author_and_software_defined_assembly 6 
PQS monomeric 1 author_and_software_defined_assembly 7 
PQS monomeric 1 author_and_software_defined_assembly 8 
PQS monomeric 1 author_and_software_defined_assembly 9 
PQS monomeric 1 author_and_software_defined_assembly 10 
PQS monomeric 1 author_and_software_defined_assembly 11 
PQS monomeric 1 author_and_software_defined_assembly 12 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,M,O 1 1 
B,P 2 1 
C,Q 3 1 
D,R 4 1 
E,S 5 1 
F,T 6 1 
G,U 7 1 
H,V 8 1 
I,N,W 9 1 
J,X 10 1 
K,Y 11 1 
L,Z 12 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 M N N 
? 2 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 43 A ASN 43 1_555 M NA NA . A NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc2 A OD1 ASN 43 A ASN 43 2_665 M NA NA . A NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc3 A OD1 ASN 43 A ASN 43 4_565 M NA NA . A NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc4 A OD1 ASN 43 A ASN 43 3_655 M NA NA . A NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? 
metalc ? metalc5 I OD1 ASN 43 I ASN 43 2_555 N NA NA . I NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc6 I OD1 ASN 43 I ASN 43 3_555 N NA NA . I NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc7 I OD1 ASN 43 I ASN 43 4_555 N NA NA . I NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc8 I OD1 ASN 43 I ASN 43 1_555 N NA NA . I NA 1059 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc9 N NA NA . I NA 1059 1_555 W O HOH . I HOH 2004 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc10 N NA NA . I NA 1059 1_555 W O HOH . I HOH 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc11 N NA NA . I NA 1059 1_555 W O HOH . I HOH 2004 3_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc12 N NA NA . I NA 1059 1_555 W O HOH . I HOH 2004 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2J6K 
_atom_sites.fract_transf_matrix[1][1]    0.008332 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008332 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006496 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 2 NA A 1 1059 1059 NA NA . 
N 2 NA I 1 1059 1059 NA NA . 
O 3 HOH A 1 2001 2001 HOH HOH . 
O 3 HOH A 2 2002 2002 HOH HOH . 
O 3 HOH A 3 2003 2003 HOH HOH . 
O 3 HOH A 4 2004 2004 HOH HOH . 
O 3 HOH A 5 2005 2005 HOH HOH . 
O 3 HOH A 6 2006 2006 HOH HOH . 
O 3 HOH A 7 2007 2007 HOH HOH . 
O 3 HOH A 8 2008 2008 HOH HOH . 
O 3 HOH A 9 2009 2009 HOH HOH . 
O 3 HOH A 10 2010 2010 HOH HOH . 
P 3 HOH B 1 2001 2001 HOH HOH . 
P 3 HOH B 2 2002 2002 HOH HOH . 
P 3 HOH B 3 2003 2003 HOH HOH . 
P 3 HOH B 4 2004 2004 HOH HOH . 
P 3 HOH B 5 2005 2005 HOH HOH . 
P 3 HOH B 6 2006 2006 HOH HOH . 
P 3 HOH B 7 2007 2007 HOH HOH . 
P 3 HOH B 8 2008 2008 HOH HOH . 
P 3 HOH B 9 2009 2009 HOH HOH . 
P 3 HOH B 10 2010 2010 HOH HOH . 
P 3 HOH B 11 2011 2011 HOH HOH . 
Q 3 HOH C 1 2001 2001 HOH HOH . 
Q 3 HOH C 2 2002 2002 HOH HOH . 
Q 3 HOH C 3 2003 2003 HOH HOH . 
Q 3 HOH C 4 2004 2004 HOH HOH . 
Q 3 HOH C 5 2005 2005 HOH HOH . 
Q 3 HOH C 6 2006 2006 HOH HOH . 
Q 3 HOH C 7 2007 2007 HOH HOH . 
Q 3 HOH C 8 2008 2008 HOH HOH . 
R 3 HOH D 1 2001 2001 HOH HOH . 
R 3 HOH D 2 2002 2002 HOH HOH . 
R 3 HOH D 3 2003 2003 HOH HOH . 
R 3 HOH D 4 2004 2004 HOH HOH . 
R 3 HOH D 5 2005 2005 HOH HOH . 
R 3 HOH D 6 2006 2006 HOH HOH . 
R 3 HOH D 7 2007 2007 HOH HOH . 
R 3 HOH D 8 2008 2008 HOH HOH . 
R 3 HOH D 9 2009 2009 HOH HOH . 
R 3 HOH D 10 2010 2010 HOH HOH . 
R 3 HOH D 11 2011 2011 HOH HOH . 
R 3 HOH D 12 2012 2012 HOH HOH . 
R 3 HOH D 13 2013 2013 HOH HOH . 
S 3 HOH E 1 2001 2001 HOH HOH . 
S 3 HOH E 2 2002 2002 HOH HOH . 
S 3 HOH E 3 2003 2003 HOH HOH . 
S 3 HOH E 4 2004 2004 HOH HOH . 
S 3 HOH E 5 2005 2005 HOH HOH . 
S 3 HOH E 6 2006 2006 HOH HOH . 
S 3 HOH E 7 2007 2007 HOH HOH . 
S 3 HOH E 8 2008 2008 HOH HOH . 
S 3 HOH E 9 2009 2009 HOH HOH . 
S 3 HOH E 10 2010 2010 HOH HOH . 
T 3 HOH F 1 2001 2001 HOH HOH . 
T 3 HOH F 2 2002 2002 HOH HOH . 
T 3 HOH F 3 2003 2003 HOH HOH . 
T 3 HOH F 4 2004 2004 HOH HOH . 
T 3 HOH F 5 2005 2005 HOH HOH . 
U 3 HOH G 1 2001 2001 HOH HOH . 
U 3 HOH G 2 2002 2002 HOH HOH . 
V 3 HOH H 1 2001 2001 HOH HOH . 
V 3 HOH H 2 2002 2002 HOH HOH . 
V 3 HOH H 3 2003 2003 HOH HOH . 
V 3 HOH H 4 2004 2004 HOH HOH . 
V 3 HOH H 5 2005 2005 HOH HOH . 
V 3 HOH H 6 2006 2006 HOH HOH . 
W 3 HOH I 1 2001 2001 HOH HOH . 
W 3 HOH I 2 2002 2002 HOH HOH . 
W 3 HOH I 3 2003 2003 HOH HOH . 
W 3 HOH I 4 2004 2004 HOH HOH . 
W 3 HOH I 5 2005 2005 HOH HOH . 
X 3 HOH J 1 2001 2001 HOH HOH . 
X 3 HOH J 2 2002 2002 HOH HOH . 
X 3 HOH J 3 2003 2003 HOH HOH . 
X 3 HOH J 4 2004 2004 HOH HOH . 
X 3 HOH J 5 2005 2005 HOH HOH . 
X 3 HOH J 6 2006 2006 HOH HOH . 
X 3 HOH J 7 2007 2007 HOH HOH . 
X 3 HOH J 8 2008 2008 HOH HOH . 
X 3 HOH J 9 2009 2009 HOH HOH . 
X 3 HOH J 10 2010 2010 HOH HOH . 
X 3 HOH J 11 2011 2011 HOH HOH . 
X 3 HOH J 12 2012 2012 HOH HOH . 
X 3 HOH J 13 2013 2013 HOH HOH . 
X 3 HOH J 14 2014 2014 HOH HOH . 
Y 3 HOH K 1 2001 2001 HOH HOH . 
Y 3 HOH K 2 2002 2002 HOH HOH . 
Y 3 HOH K 3 2003 2003 HOH HOH . 
Y 3 HOH K 4 2004 2004 HOH HOH . 
Y 3 HOH K 5 2005 2005 HOH HOH . 
Y 3 HOH K 6 2006 2006 HOH HOH . 
Y 3 HOH K 7 2007 2007 HOH HOH . 
Y 3 HOH K 8 2008 2008 HOH HOH . 
Y 3 HOH K 9 2009 2009 HOH HOH . 
Y 3 HOH K 10 2010 2010 HOH HOH . 
Z 3 HOH L 1 2001 2001 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         M 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               60.009 
_atom_site.Cartn_y               60.009 
_atom_site.Cartn_z               -2.405 
_atom_site.occupancy             0.25 
_atom_site.B_iso_or_equiv        26.82 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           1059 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#