data_2J9H
#
_model_server_result.job_id            8kI5XbDNWbJxyTev2aExJQ 
_model_server_result.datetime_utc      '2024-10-13 04:17:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2j9h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":300}' 
#
_entry.id    2J9H 
#
_exptl.entry_id    2J9H 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              392.491 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            S-HEXYLGLUTATHIONE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2J9H 
_cell.length_a            59.566 
_cell.length_b            59.566 
_cell.length_c            238.35 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2J9H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 43 21 2' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
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_chem_comp.formula           'C16 H30 N3 O6 S 1' 
_chem_comp.formula_weight    392.491 
_chem_comp.id                GTX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              S-HEXYLGLUTATHIONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 CA1 GTX sing 129 n n 
N1 HN11 GTX sing 130 n n 
N1 HN12 GTX sing 131 n n 
N1 HN13 GTX sing 132 n n 
CA1 C1 GTX sing 133 n n 
CA1 CB1 GTX sing 134 n n 
CA1 HA1 GTX sing 135 n n 
C1 O11 GTX doub 136 n n 
C1 O12 GTX sing 137 n n 
O12 HO2 GTX sing 138 n n 
CB1 CG1 GTX sing 139 n n 
CB1 HB11 GTX sing 140 n n 
CB1 HB12 GTX sing 141 n n 
CG1 CD1 GTX sing 142 n n 
CG1 HG11 GTX sing 143 n n 
CG1 HG12 GTX sing 144 n n 
CD1 OE1 GTX doub 145 n n 
CD1 N2 GTX sing 146 n n 
N2 CA2 GTX sing 147 n n 
N2 HN2 GTX sing 148 n n 
CA2 C2 GTX sing 149 n n 
CA2 CB2 GTX sing 150 n n 
CA2 HA2 GTX sing 151 n n 
C2 O2 GTX doub 152 n n 
C2 N3 GTX sing 153 n n 
CB2 SG2 GTX sing 154 n n 
CB2 HB21 GTX sing 155 n n 
CB2 HB22 GTX sing 156 n n 
SG2 C1S GTX sing 157 n n 
C1S C2S GTX sing 158 n n 
C1S HS11 GTX sing 159 n n 
C1S HS12 GTX sing 160 n n 
C2S C3S GTX sing 161 n n 
C2S HS21 GTX sing 162 n n 
C2S HS22 GTX sing 163 n n 
C3S C4S GTX sing 164 n n 
C3S HS31 GTX sing 165 n n 
C3S HS32 GTX sing 166 n n 
C4S C5S GTX sing 167 n n 
C4S HS41 GTX sing 168 n n 
C4S HS42 GTX sing 169 n n 
C5S C6S GTX sing 170 n n 
C5S HS51 GTX sing 171 n n 
C5S HS52 GTX sing 172 n n 
C6S HS61 GTX sing 173 n n 
C6S HS62 GTX sing 174 n n 
C6S HS63 GTX sing 175 n n 
N3 CA3 GTX sing 176 n n 
N3 HN3 GTX sing 177 n n 
CA3 C3 GTX sing 178 n n 
CA3 HA31 GTX sing 179 n n 
CA3 HA32 GTX sing 180 n n 
C3 O31 GTX doub 181 n n 
C3 O32 GTX sing 182 n n 
O32 HO3 GTX sing 183 n n 
#
_atom_sites.entry_id                     2J9H 
_atom_sites.fract_transf_matrix[1][1]    0.016788 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016788 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004196 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 GTX A 1 300 300 GTX GTX . 
D 2 GTX B 1 300 300 GTX GTX . 
E 3 HOH A 1 2001 2001 HOH HOH . 
E 3 HOH A 2 2002 2002 HOH HOH . 
E 3 HOH A 3 2003 2003 HOH HOH . 
E 3 HOH A 4 2004 2004 HOH HOH . 
E 3 HOH A 5 2005 2005 HOH HOH . 
E 3 HOH A 6 2006 2006 HOH HOH . 
E 3 HOH A 7 2007 2007 HOH HOH . 
E 3 HOH A 8 2008 2008 HOH HOH . 
E 3 HOH A 9 2009 2009 HOH HOH . 
E 3 HOH A 10 2010 2010 HOH HOH . 
E 3 HOH A 11 2011 2011 HOH HOH . 
E 3 HOH A 12 2012 2012 HOH HOH . 
E 3 HOH A 13 2013 2013 HOH HOH . 
E 3 HOH A 14 2014 2014 HOH HOH . 
E 3 HOH A 15 2015 2015 HOH HOH . 
E 3 HOH A 16 2016 2016 HOH HOH . 
E 3 HOH A 17 2017 2017 HOH HOH . 
E 3 HOH A 18 2018 2018 HOH HOH . 
E 3 HOH A 19 2019 2019 HOH HOH . 
E 3 HOH A 20 2020 2020 HOH HOH . 
E 3 HOH A 21 2021 2021 HOH HOH . 
E 3 HOH A 22 2022 2022 HOH HOH . 
F 3 HOH B 1 2001 2001 HOH HOH . 
F 3 HOH B 2 2002 2002 HOH HOH . 
F 3 HOH B 3 2003 2003 HOH HOH . 
F 3 HOH B 4 2004 2004 HOH HOH . 
F 3 HOH B 5 2005 2005 HOH HOH . 
F 3 HOH B 6 2006 2006 HOH HOH . 
F 3 HOH B 7 2007 2007 HOH HOH . 
F 3 HOH B 8 2008 2008 HOH HOH . 
F 3 HOH B 9 2009 2009 HOH HOH . 
F 3 HOH B 10 2010 2010 HOH HOH . 
F 3 HOH B 11 2011 2011 HOH HOH . 
F 3 HOH B 12 2012 2012 HOH HOH . 
F 3 HOH B 13 2013 2013 HOH HOH . 
F 3 HOH B 14 2014 2014 HOH HOH . 
F 3 HOH B 15 2015 2015 HOH HOH . 
F 3 HOH B 16 2016 2016 HOH HOH . 
F 3 HOH B 17 2017 2017 HOH HOH . 
F 3 HOH B 18 2018 2018 HOH HOH . 
F 3 HOH B 19 2019 2019 HOH HOH . 
F 3 HOH B 20 2020 2020 HOH HOH . 
F 3 HOH B 21 2021 2021 HOH HOH . 
F 3 HOH B 22 2022 2022 HOH HOH . 
F 3 HOH B 23 2023 2023 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 GTX . . . D 2 29.33 -5.342 10.056 1 54.57 ? N1 GTX 300 B 1 
HETATM 2 C CA1 GTX . . . D 2 30.576 -4.73 10.487 1 56.23 ? CA1 GTX 300 B 1 
HETATM 3 C C1 GTX . . . D 2 30.485 -4.249 11.918 1 56.07 ? C1 GTX 300 B 1 
HETATM 4 O O11 GTX . . . D 2 29.448 -3.692 12.35 1 54.72 ? O11 GTX 300 B 1 
HETATM 5 O O12 GTX . . . D 2 31.46 -4.389 12.696 1 56.06 ? O12 GTX 300 B 1 
HETATM 6 C CB1 GTX . . . D 2 30.925 -3.56 9.569 1 56.91 ? CB1 GTX 300 B 1 
HETATM 7 C CG1 GTX . . . D 2 32.403 -3.163 9.6 1 57.04 ? CG1 GTX 300 B 1 
HETATM 8 C CD1 GTX . . . D 2 32.74 -2.496 8.283 1 57.91 ? CD1 GTX 300 B 1 
HETATM 9 O OE1 GTX . . . D 2 31.68 -1.976 7.498 1 58.85 ? OE1 GTX 300 B 1 
HETATM 10 N N2 GTX . . . D 2 34.035 -2.439 7.932 1 57 ? N2 GTX 300 B 1 
HETATM 11 C CA2 GTX . . . D 2 34.555 -1.758 6.746 1 55.46 ? CA2 GTX 300 B 1 
HETATM 12 C C2 GTX . . . D 2 35.865 -2.352 6.272 1 54.93 ? C2 GTX 300 B 1 
HETATM 13 O O2 GTX . . . D 2 36.677 -3.031 7.192 1 54.68 ? O2 GTX 300 B 1 
HETATM 14 C CB2 GTX . . . D 2 34.687 -0.253 7.002 1 55.13 ? CB2 GTX 300 B 1 
HETATM 15 S SG2 GTX . . . D 2 35.775 0.095 8.4 1 54.81 ? SG2 GTX 300 B 1 
HETATM 16 C C1S GTX . . . D 2 35.523 1.885 8.553 1 52.22 ? C1S GTX 300 B 1 
HETATM 17 C C2S GTX . . . D 2 36.297 2.789 7.587 1 52.62 ? C2S GTX 300 B 1 
HETATM 18 C C3S GTX . . . D 2 37.771 2.429 7.358 1 52.25 ? C3S GTX 300 B 1 
HETATM 19 C C4S GTX . . . D 2 37.976 1.778 5.984 1 51.66 ? C4S GTX 300 B 1 
HETATM 20 C C5S GTX . . . D 2 39.254 2.213 5.272 1 50.8 ? C5S GTX 300 B 1 
HETATM 21 C C6S GTX . . . D 2 39.69 1.197 4.214 1 49.25 ? C6S GTX 300 B 1 
HETATM 22 N N3 GTX . . . D 2 36.2 -2.222 4.978 1 54.35 ? N3 GTX 300 B 1 
HETATM 23 C CA3 GTX . . . D 2 37.231 -2.999 4.31 1 52.54 ? CA3 GTX 300 B 1 
HETATM 24 C C3 GTX . . . D 2 36.7 -4.131 3.449 1 54.32 ? C3 GTX 300 B 1 
HETATM 25 O O31 GTX . . . D 2 37.443 -4.711 2.622 1 51.42 ? O31 GTX 300 B 1 
HETATM 26 O O32 GTX . . . D 2 35.506 -4.527 3.54 1 56.21 ? O32 GTX 300 B 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           26 
#