data_2JBS # _model_server_result.job_id 4BrJfRIgwj3o1Z4yO751NA _model_server_result.datetime_utc '2025-07-08 06:27:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2jbs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1423}' # _entry.id 2JBS # _exptl.entry_id 2JBS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2JBS _cell.length_a 94.316 _cell.length_b 183.425 _cell.length_c 284.368 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JBS _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 2JBS _atom_sites.fract_transf_matrix[1][1] 0.010603 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005452 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003517 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FMN A 1 1423 1423 FMN FMN . F 2 FMN B 1 1423 1423 FMN FMN . G 2 FMN C 1 1423 1423 FMN FMN . H 2 FMN D 1 1423 1423 FMN FMN . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . G 2 13.987 60.076 55.988 1 85.99 ? N1 FMN 1423 C 1 HETATM 2 C C2 FMN . . . G 2 14.269 60.846 57.085 1 85.8 ? C2 FMN 1423 C 1 HETATM 3 O O2 FMN . . . G 2 15.311 61.48 57.098 1 86.11 ? O2 FMN 1423 C 1 HETATM 4 N N3 FMN . . . G 2 13.386 60.896 58.148 1 85.81 ? N3 FMN 1423 C 1 HETATM 5 C C4 FMN . . . G 2 12.2 60.168 58.116 1 85.96 ? C4 FMN 1423 C 1 HETATM 6 O O4 FMN . . . G 2 11.337 60.392 58.985 1 86.61 ? O4 FMN 1423 C 1 HETATM 7 C C4A FMN . . . G 2 11.912 59.366 56.991 1 86.37 ? C4A FMN 1423 C 1 HETATM 8 N N5 FMN . . . G 2 10.739 58.617 56.908 1 86.31 ? N5 FMN 1423 C 1 HETATM 9 C C5A FMN . . . G 2 10.484 57.847 55.787 1 85.89 ? C5A FMN 1423 C 1 HETATM 10 C C6 FMN . . . G 2 9.31 57.116 55.723 1 85.8 ? C6 FMN 1423 C 1 HETATM 11 C C7 FMN . . . G 2 9.041 56.318 54.604 1 86.09 ? C7 FMN 1423 C 1 HETATM 12 C C7M FMN . . . G 2 8.019 55.227 54.816 1 85.3 ? C7M FMN 1423 C 1 HETATM 13 C C8 FMN . . . G 2 9.965 56.237 53.529 1 86.12 ? C8 FMN 1423 C 1 HETATM 14 C C8M FMN . . . G 2 10.219 54.88 52.909 1 84.19 ? C8M FMN 1423 C 1 HETATM 15 C C9 FMN . . . G 2 11.121 57.019 53.6 1 85.72 ? C9 FMN 1423 C 1 HETATM 16 C C9A FMN . . . G 2 11.397 57.799 54.725 1 85.87 ? C9A FMN 1423 C 1 HETATM 17 N N10 FMN . . . G 2 12.563 58.553 54.782 1 86.34 ? N10 FMN 1423 C 1 HETATM 18 C C10 FMN . . . G 2 12.824 59.321 55.922 1 86.33 ? C10 FMN 1423 C 1 HETATM 19 C C1' FMN . . . G 2 13.153 59.066 53.488 1 85.42 ? C1' FMN 1423 C 1 HETATM 20 C C2' FMN . . . G 2 14.526 58.403 53.235 1 85.5 ? C2' FMN 1423 C 1 HETATM 21 O O2' FMN . . . G 2 15.517 58.689 54.225 1 86.46 ? O2' FMN 1423 C 1 HETATM 22 C C3' FMN . . . G 2 15.093 58.811 51.887 1 85.82 ? C3' FMN 1423 C 1 HETATM 23 O O3' FMN . . . G 2 15.302 60.209 51.856 1 86.57 ? O3' FMN 1423 C 1 HETATM 24 C C4' FMN . . . G 2 14.164 58.354 50.773 1 85.96 ? C4' FMN 1423 C 1 HETATM 25 O O4' FMN . . . G 2 13.835 56.986 50.962 1 86.93 ? O4' FMN 1423 C 1 HETATM 26 C C5' FMN . . . G 2 14.902 58.517 49.461 1 86.88 ? C5' FMN 1423 C 1 HETATM 27 O O5' FMN . . . G 2 14.519 57.436 48.643 1 90.06 ? O5' FMN 1423 C 1 HETATM 28 P P FMN . . . G 2 14.189 57.853 47.144 1 95.02 ? P FMN 1423 C 1 HETATM 29 O O1P FMN . . . G 2 12.862 57.163 46.798 1 93.09 ? O1P FMN 1423 C 1 HETATM 30 O O2P FMN . . . G 2 13.956 59.36 47.078 1 91.87 ? O2P FMN 1423 C 1 HETATM 31 O O3P FMN . . . G 2 15.386 57.513 46.244 1 91.52 ? O3P FMN 1423 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 234 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 31 #