data_2JBT
#
_model_server_result.job_id            E9byaWAknHwv40rnMdV_Yg 
_model_server_result.datetime_utc      '2025-07-08 05:23:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2jbt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1423}' 
#
_entry.id    2JBT 
#
_exptl.entry_id    2JBT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2JBT 
_cell.length_a            91.987 
_cell.length_b            181.263 
_cell.length_c            286.208 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2JBT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 102 n n 
N1 C10 FMN doub 103 n n 
C2 O2 FMN doub 104 n n 
C2 N3 FMN sing 105 n n 
N3 C4 FMN sing 106 n n 
N3 HN3 FMN sing 107 n n 
C4 O4 FMN doub 108 n n 
C4 C4A FMN sing 109 n n 
C4A N5 FMN doub 110 n n 
C4A C10 FMN sing 111 n n 
N5 C5A FMN sing 112 n n 
C5A C6 FMN doub 113 n y 
C5A C9A FMN sing 114 n y 
C6 C7 FMN sing 115 n y 
C6 H6 FMN sing 116 n n 
C7 C7M FMN sing 117 n n 
C7 C8 FMN doub 118 n y 
C7M HM71 FMN sing 119 n n 
C7M HM72 FMN sing 120 n n 
C7M HM73 FMN sing 121 n n 
C8 C8M FMN sing 122 n n 
C8 C9 FMN sing 123 n y 
C8M HM81 FMN sing 124 n n 
C8M HM82 FMN sing 125 n n 
C8M HM83 FMN sing 126 n n 
C9 C9A FMN doub 127 n y 
C9 H9 FMN sing 128 n n 
C9A N10 FMN sing 129 n n 
N10 C10 FMN sing 130 n n 
N10 C1' FMN sing 131 n n 
C1' C2' FMN sing 132 n n 
C1' "H1'1" FMN sing 133 n n 
C1' "H1'2" FMN sing 134 n n 
C2' O2' FMN sing 135 n n 
C2' C3' FMN sing 136 n n 
C2' H2' FMN sing 137 n n 
O2' HO2' FMN sing 138 n n 
C3' O3' FMN sing 139 n n 
C3' C4' FMN sing 140 n n 
C3' H3' FMN sing 141 n n 
O3' HO3' FMN sing 142 n n 
C4' O4' FMN sing 143 n n 
C4' C5' FMN sing 144 n n 
C4' H4' FMN sing 145 n n 
O4' HO4' FMN sing 146 n n 
C5' O5' FMN sing 147 n n 
C5' "H5'1" FMN sing 148 n n 
C5' "H5'2" FMN sing 149 n n 
O5' P FMN sing 150 n n 
P O1P FMN doub 151 n n 
P O2P FMN sing 152 n n 
P O3P FMN sing 153 n n 
O2P HOP2 FMN sing 154 n n 
O3P HOP3 FMN sing 155 n n 
#
_atom_sites.entry_id                     2JBT 
_atom_sites.fract_transf_matrix[1][1]    0.010871 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005517 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003494 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FMN A 1 1423 1423 FMN FMN . 
F 3 4HP A 1 1424 1424 4HP 4HP . 
G 2 FMN B 1 1423 1423 FMN FMN . 
H 3 4HP B 1 1424 1424 4HP 4HP . 
I 2 FMN C 1 1423 1423 FMN FMN . 
J 3 4HP C 1 1424 1424 4HP 4HP . 
K 2 FMN D 1 1423 1423 FMN FMN . 
L 3 4HP D 1 1424 1424 4HP 4HP . 
M 4 HOH A 1 2001 2001 HOH HOH . 
M 4 HOH A 2 2002 2002 HOH HOH . 
M 4 HOH A 3 2003 2003 HOH HOH . 
M 4 HOH A 4 2004 2004 HOH HOH . 
M 4 HOH A 5 2005 2005 HOH HOH . 
M 4 HOH A 6 2006 2006 HOH HOH . 
M 4 HOH A 7 2007 2007 HOH HOH . 
N 4 HOH B 1 2001 2001 HOH HOH . 
N 4 HOH B 2 2002 2002 HOH HOH . 
N 4 HOH B 3 2003 2003 HOH HOH . 
N 4 HOH B 4 2004 2004 HOH HOH . 
N 4 HOH B 5 2005 2005 HOH HOH . 
N 4 HOH B 6 2006 2006 HOH HOH . 
N 4 HOH B 7 2007 2007 HOH HOH . 
N 4 HOH B 8 2008 2008 HOH HOH . 
N 4 HOH B 9 2009 2009 HOH HOH . 
N 4 HOH B 10 2010 2010 HOH HOH . 
O 4 HOH C 1 2001 2001 HOH HOH . 
O 4 HOH C 2 2002 2002 HOH HOH . 
O 4 HOH C 3 2003 2003 HOH HOH . 
O 4 HOH C 4 2004 2004 HOH HOH . 
O 4 HOH C 5 2005 2005 HOH HOH . 
O 4 HOH C 6 2006 2006 HOH HOH . 
P 4 HOH D 1 2001 2001 HOH HOH . 
P 4 HOH D 2 2002 2002 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . G 2 24.761 5.023 88.727 1 71.49 ? N1 FMN 1423 B 1 
HETATM 2 C C2 FMN . . . G 2 24.339 4.251 87.674 1 71.55 ? C2 FMN 1423 B 1 
HETATM 3 O O2 FMN . . . G 2 25.186 3.623 87.049 1 71.86 ? O2 FMN 1423 B 1 
HETATM 4 N N3 FMN . . . G 2 22.994 4.192 87.336 1 71.28 ? N3 FMN 1423 B 1 
HETATM 5 C C4 FMN . . . G 2 22.064 4.922 88.062 1 71.2 ? C4 FMN 1423 B 1 
HETATM 6 O O4 FMN . . . G 2 20.884 4.923 87.708 1 70.33 ? O4 FMN 1423 B 1 
HETATM 7 C C4A FMN . . . G 2 22.49 5.714 89.138 1 71.62 ? C4A FMN 1423 B 1 
HETATM 8 N N5 FMN . . . G 2 21.588 6.452 89.888 1 71.34 ? N5 FMN 1423 B 1 
HETATM 9 C C5A FMN . . . G 2 22.045 7.223 90.938 1 71.27 ? C5A FMN 1423 B 1 
HETATM 10 C C6 FMN . . . G 2 21.132 7.959 91.688 1 71.47 ? C6 FMN 1423 B 1 
HETATM 11 C C7 FMN . . . G 2 21.561 8.758 92.75 1 71.45 ? C7 FMN 1423 B 1 
HETATM 12 C C7M FMN . . . G 2 20.557 9.694 93.369 1 70.97 ? C7M FMN 1423 B 1 
HETATM 13 C C8 FMN . . . G 2 22.927 8.823 93.069 1 71.28 ? C8 FMN 1423 B 1 
HETATM 14 C C8M FMN . . . G 2 23.473 10.043 93.755 1 70.24 ? C8M FMN 1423 B 1 
HETATM 15 C C9 FMN . . . G 2 23.833 8.069 92.32 1 71.34 ? C9 FMN 1423 B 1 
HETATM 16 C C9A FMN . . . G 2 23.408 7.271 91.254 1 71.44 ? C9A FMN 1423 B 1 
HETATM 17 N N10 FMN . . . G 2 24.318 6.527 90.514 1 71.42 ? N10 FMN 1423 B 1 
HETATM 18 C C10 FMN . . . G 2 23.854 5.759 89.461 1 71.59 ? C10 FMN 1423 B 1 
HETATM 19 C C1' FMN . . . G 2 25.603 6.084 91.146 1 71.44 ? C1' FMN 1423 B 1 
HETATM 20 C C2' FMN . . . G 2 26.824 6.718 90.459 1 72.39 ? C2' FMN 1423 B 1 
HETATM 21 O O2' FMN . . . G 2 26.919 6.382 89.09 1 71.55 ? O2' FMN 1423 B 1 
HETATM 22 C C3' FMN . . . G 2 28.117 6.29 91.141 1 73.33 ? C3' FMN 1423 B 1 
HETATM 23 O O3' FMN . . . G 2 28.332 4.902 90.963 1 73.19 ? O3' FMN 1423 B 1 
HETATM 24 C C4' FMN . . . G 2 28.042 6.64 92.62 1 74.55 ? C4' FMN 1423 B 1 
HETATM 25 O O4' FMN . . . G 2 27.949 8.041 92.763 1 73.46 ? O4' FMN 1423 B 1 
HETATM 26 C C5' FMN . . . G 2 29.246 6.093 93.36 1 76.44 ? C5' FMN 1423 B 1 
HETATM 27 O O5' FMN . . . G 2 29.935 7.165 93.944 1 79.75 ? O5' FMN 1423 B 1 
HETATM 28 P P FMN . . . G 2 30.311 7.116 95.495 1 80.89 ? P FMN 1423 B 1 
HETATM 29 O O1P FMN . . . G 2 29.503 8.17 96.194 1 80.93 ? O1P FMN 1423 B 1 
HETATM 30 O O2P FMN . . . G 2 29.945 5.773 96.073 1 83 ? O2P FMN 1423 B 1 
HETATM 31 O O3P FMN . . . G 2 31.797 7.362 95.624 1 81.7 ? O3P FMN 1423 B 1 
#
_model_server_stats.io_time_ms              47 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           236 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#