data_2JBU
#
_model_server_result.job_id            tYSgUk9UNN9apYwLBEeCng 
_model_server_result.datetime_utc      '2024-11-25 08:03:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2jbu 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1101}' 
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_entry.id    2JBU 
#
_exptl.entry_id    2JBU 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              88.105 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '1,4-DIETHYLENE DIOXIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2JBU 
_cell.length_a            263.277 
_cell.length_b            263.277 
_cell.length_c            90.735 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 2JBU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PQS dimeric 2 software_defined_assembly 1 
PQS dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,G 1 1 
B,D,F,H,I 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
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_chem_comp.formula           'C4 H8 O2' 
_chem_comp.formula_weight    88.105 
_chem_comp.id                DIO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1,4-DIETHYLENE DIOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C1' DIO sing 83 n n 
C1 O1 DIO sing 84 n n 
C1 H11 DIO sing 85 n n 
C1 H12 DIO sing 86 n n 
C2 C2' DIO sing 87 n n 
C2 O1 DIO sing 88 n n 
C2 H21 DIO sing 89 n n 
C2 H22 DIO sing 90 n n 
C1' O1' DIO sing 91 n n 
C1' "H1'1" DIO sing 92 n n 
C1' "H1'2" DIO sing 93 n n 
C2' O1' DIO sing 94 n n 
C2' "H2'1" DIO sing 95 n n 
C2' "H2'2" DIO sing 96 n n 
#
_atom_sites.entry_id                     2JBU 
_atom_sites.fract_transf_matrix[1][1]    0.003798 
_atom_sites.fract_transf_matrix[1][2]    0.002193 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004386 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011021 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 DIO A 1 1101 2017 DIO DIO . 
F 3 DIO B 1 1101 2017 DIO DIO . 
G 4 HOH A 1 1201 3041 HOH HOH . 
G 4 HOH A 2 1202 3005 HOH HOH . 
G 4 HOH A 3 1203 3022 HOH HOH . 
G 4 HOH A 4 1204 3012 HOH HOH . 
G 4 HOH A 5 1205 3011 HOH HOH . 
G 4 HOH A 6 1206 3025 HOH HOH . 
G 4 HOH A 7 1207 3018 HOH HOH . 
G 4 HOH A 8 1208 3027 HOH HOH . 
G 4 HOH A 9 1209 3010 HOH HOH . 
G 4 HOH A 10 1210 3001 HOH HOH . 
G 4 HOH A 11 1211 3024 HOH HOH . 
G 4 HOH A 12 1212 3030 HOH HOH . 
G 4 HOH A 13 1213 3026 HOH HOH . 
G 4 HOH A 14 1214 3029 HOH HOH . 
G 4 HOH A 15 1215 3034 HOH HOH . 
G 4 HOH A 16 1216 3017 HOH HOH . 
G 4 HOH A 17 1217 3038 HOH HOH . 
G 4 HOH A 18 1218 3043 HOH HOH . 
G 4 HOH A 19 1219 3035 HOH HOH . 
G 4 HOH A 20 1220 3016 HOH HOH . 
G 4 HOH A 21 1221 3040 HOH HOH . 
G 4 HOH A 22 1222 3006 HOH HOH . 
G 4 HOH A 23 1223 3037 HOH HOH . 
G 4 HOH A 24 1224 3014 HOH HOH . 
G 4 HOH A 25 1225 3020 HOH HOH . 
G 4 HOH A 26 1226 3031 HOH HOH . 
G 4 HOH A 27 1227 3003 HOH HOH . 
G 4 HOH A 28 1228 3013 HOH HOH . 
G 4 HOH A 29 1229 3015 HOH HOH . 
G 4 HOH A 30 1230 3028 HOH HOH . 
G 4 HOH A 31 1231 3021 HOH HOH . 
G 4 HOH A 32 1232 3032 HOH HOH . 
G 4 HOH A 33 1233 3019 HOH HOH . 
G 4 HOH A 34 1234 3042 HOH HOH . 
G 4 HOH A 35 1235 3023 HOH HOH . 
G 4 HOH A 36 1236 3002 HOH HOH . 
G 4 HOH A 37 1237 3044 HOH HOH . 
G 4 HOH A 38 1238 3009 HOH HOH . 
G 4 HOH A 39 1239 3033 HOH HOH . 
G 4 HOH A 40 1240 3039 HOH HOH . 
G 4 HOH A 41 1241 3036 HOH HOH . 
G 4 HOH A 42 1242 3007 HOH HOH . 
G 4 HOH A 43 1243 3008 HOH HOH . 
G 4 HOH A 44 1244 3004 HOH HOH . 
H 4 HOH B 1 1201 3025 HOH HOH . 
H 4 HOH B 2 1202 3035 HOH HOH . 
H 4 HOH B 3 1203 3024 HOH HOH . 
H 4 HOH B 4 1204 3003 HOH HOH . 
H 4 HOH B 5 1205 3031 HOH HOH . 
H 4 HOH B 6 1206 3026 HOH HOH . 
H 4 HOH B 7 1207 3017 HOH HOH . 
H 4 HOH B 8 1208 3019 HOH HOH . 
H 4 HOH B 9 1209 3011 HOH HOH . 
H 4 HOH B 10 1210 3014 HOH HOH . 
H 4 HOH B 11 1211 3006 HOH HOH . 
H 4 HOH B 12 1212 3002 HOH HOH . 
H 4 HOH B 13 1213 3020 HOH HOH . 
H 4 HOH B 14 1214 3018 HOH HOH . 
H 4 HOH B 15 1215 3029 HOH HOH . 
H 4 HOH B 16 1216 3010 HOH HOH . 
H 4 HOH B 17 1217 3009 HOH HOH . 
H 4 HOH B 18 1218 3027 HOH HOH . 
H 4 HOH B 19 1219 3015 HOH HOH . 
H 4 HOH B 20 1220 3028 HOH HOH . 
H 4 HOH B 21 1221 3008 HOH HOH . 
H 4 HOH B 22 1222 3007 HOH HOH . 
H 4 HOH B 23 1223 3032 HOH HOH . 
H 4 HOH B 24 1224 3021 HOH HOH . 
H 4 HOH B 25 1225 3022 HOH HOH . 
H 4 HOH B 26 1226 3033 HOH HOH . 
H 4 HOH B 27 1227 3005 HOH HOH . 
H 4 HOH B 28 1228 3012 HOH HOH . 
H 4 HOH B 29 1229 3013 HOH HOH . 
H 4 HOH B 30 1230 3001 HOH HOH . 
H 4 HOH B 31 1231 3030 HOH HOH . 
H 4 HOH B 32 1232 3016 HOH HOH . 
H 4 HOH B 33 1233 3004 HOH HOH . 
H 4 HOH B 34 1234 3034 HOH HOH . 
H 4 HOH B 35 1235 3023 HOH HOH . 
I 4 HOH D 1 3001 3001 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 DIO . . . E 3 -104.816 47.128 20.073 1 60.73 ? C1 DIO 1101 A 1 
HETATM 2 C C2 DIO . . . E 3 -103.07 46.076 18.903 1 47.83 ? C2 DIO 1101 A 1 
HETATM 3 C C1' DIO . . . E 3 -105.528 47.412 18.736 1 61.22 ? C1' DIO 1101 A 1 
HETATM 4 C C2' DIO . . . E 3 -103.783 46.363 17.567 1 55.79 ? C2' DIO 1101 A 1 
HETATM 5 O O1 DIO . . . E 3 -104.041 45.915 19.951 1 56.97 ? O1 DIO 1101 A 1 
HETATM 6 O O1' DIO . . . E 3 -104.551 47.574 17.679 1 45.42 ? O1' DIO 1101 A 1 
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_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    31 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
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