data_2JG9 # _model_server_result.job_id mK9AIpVxf7PX0qLJqKNlWQ _model_server_result.datetime_utc '2024-11-04 18:44:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2jg9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1224}' # _entry.id 2JG9 # _exptl.entry_id 2JG9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 92.45 _cell.angle_beta 92.65 _cell.angle_gamma 113.53 _cell.entry_id 2JG9 _cell.length_a 48.15 _cell.length_b 48.24 _cell.length_c 87.79 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JG9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS trimeric 3 software_defined_assembly 1 PQS trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,I,J,K 1 1 D,E,F,H,L,M,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 61 A CYS 150 1_555 A SG CYS 79 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf2 B SG CYS 64 B CYS 154 1_555 B SG CYS 81 B CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf3 C SG CYS 65 C CYS 151 1_555 C SG CYS 79 C CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf4 D SG CYS 61 D CYS 150 1_555 D SG CYS 79 D CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf5 E SG CYS 64 E CYS 154 1_555 E SG CYS 81 E CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 F SG CYS 65 F CYS 151 1_555 F SG CYS 79 F CYS 165 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc1 A OE1 GLN 88 A GLN 177 1_555 G CA CA . B CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? metalc ? metalc2 B OD2 ASP 82 B ASP 172 1_555 G CA CA . B CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc3 B O TYR 83 B TYR 173 1_555 G CA CA . B CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc4 B OE1 GLN 89 B GLN 179 1_555 G CA CA . B CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? metalc ? metalc5 G CA CA . B CA 1224 1_555 J O HOH . B HOH 2008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc6 D OE1 GLN 88 D GLN 177 1_555 H CA CA . E CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc7 L O HOH . D HOH 2017 1_555 H CA CA . E CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc8 E OD2 ASP 82 E ASP 172 1_555 H CA CA . E CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? metalc ? metalc9 E O TYR 83 E TYR 173 1_555 H CA CA . E CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.298 ? metalc ? metalc10 E OE1 GLN 89 E GLN 179 1_555 H CA CA . E CA 1224 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2JG9 _atom_sites.fract_transf_matrix[1][1] 0.020768 _atom_sites.fract_transf_matrix[1][2] 0.009043 _atom_sites.fract_transf_matrix[1][3] 0.001569 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02261 _atom_sites.fract_transf_matrix[2][3] 0.001514 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011429 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 CA B 1 1224 1224 CA CA . H 4 CA E 1 1224 1224 CA CA . I 5 HOH A 1 2001 2001 HOH HOH . I 5 HOH A 2 2002 2002 HOH HOH . I 5 HOH A 3 2003 2003 HOH HOH . I 5 HOH A 4 2004 2004 HOH HOH . I 5 HOH A 5 2005 2005 HOH HOH . I 5 HOH A 6 2006 2006 HOH HOH . I 5 HOH A 7 2007 2007 HOH HOH . I 5 HOH A 8 2008 2008 HOH HOH . I 5 HOH A 9 2009 2009 HOH HOH . I 5 HOH A 10 2010 2010 HOH HOH . I 5 HOH A 11 2011 2011 HOH HOH . I 5 HOH A 12 2012 2012 HOH HOH . I 5 HOH A 13 2013 2013 HOH HOH . I 5 HOH A 14 2014 2014 HOH HOH . I 5 HOH A 15 2015 2015 HOH HOH . I 5 HOH A 16 2016 2016 HOH HOH . I 5 HOH A 17 2017 2017 HOH HOH . I 5 HOH A 18 2018 2018 HOH HOH . I 5 HOH A 19 2019 2019 HOH HOH . I 5 HOH A 20 2020 2020 HOH HOH . I 5 HOH A 21 2021 2021 HOH HOH . I 5 HOH A 22 2022 2022 HOH HOH . I 5 HOH A 23 2023 2023 HOH HOH . I 5 HOH A 24 2024 2024 HOH HOH . J 5 HOH B 1 2001 2001 HOH HOH . J 5 HOH B 2 2002 2002 HOH HOH . J 5 HOH B 3 2003 2003 HOH HOH . J 5 HOH B 4 2004 2004 HOH HOH . J 5 HOH B 5 2005 2005 HOH HOH . J 5 HOH B 6 2006 2006 HOH HOH . J 5 HOH B 7 2007 2007 HOH HOH . J 5 HOH B 8 2008 2008 HOH HOH . J 5 HOH B 9 2009 2009 HOH HOH . J 5 HOH B 10 2010 2010 HOH HOH . K 5 HOH C 1 2001 2001 HOH HOH . K 5 HOH C 2 2002 2002 HOH HOH . K 5 HOH C 3 2003 2003 HOH HOH . K 5 HOH C 4 2004 2004 HOH HOH . K 5 HOH C 5 2005 2005 HOH HOH . K 5 HOH C 6 2006 2006 HOH HOH . K 5 HOH C 7 2007 2007 HOH HOH . K 5 HOH C 8 2008 2008 HOH HOH . K 5 HOH C 9 2009 2009 HOH HOH . K 5 HOH C 10 2010 2010 HOH HOH . K 5 HOH C 11 2011 2011 HOH HOH . K 5 HOH C 12 2012 2012 HOH HOH . K 5 HOH C 13 2013 2013 HOH HOH . K 5 HOH C 14 2014 2014 HOH HOH . K 5 HOH C 15 2015 2015 HOH HOH . K 5 HOH C 16 2016 2016 HOH HOH . K 5 HOH C 17 2017 2017 HOH HOH . K 5 HOH C 18 2018 2018 HOH HOH . K 5 HOH C 19 2019 2019 HOH HOH . K 5 HOH C 20 2020 2020 HOH HOH . K 5 HOH C 21 2021 2021 HOH HOH . K 5 HOH C 22 2022 2022 HOH HOH . K 5 HOH C 23 2023 2023 HOH HOH . K 5 HOH C 24 2024 2024 HOH HOH . K 5 HOH C 25 2025 2025 HOH HOH . K 5 HOH C 26 2026 2026 HOH HOH . L 5 HOH D 1 2001 2001 HOH HOH . L 5 HOH D 2 2002 2002 HOH HOH . L 5 HOH D 3 2003 2003 HOH HOH . L 5 HOH D 4 2004 2004 HOH HOH . L 5 HOH D 5 2005 2005 HOH HOH . L 5 HOH D 6 2006 2006 HOH HOH . L 5 HOH D 7 2007 2007 HOH HOH . L 5 HOH D 8 2008 2008 HOH HOH . L 5 HOH D 9 2009 2009 HOH HOH . L 5 HOH D 10 2010 2010 HOH HOH . L 5 HOH D 11 2011 2011 HOH HOH . L 5 HOH D 12 2012 2012 HOH HOH . L 5 HOH D 13 2013 2013 HOH HOH . L 5 HOH D 14 2014 2014 HOH HOH . L 5 HOH D 15 2015 2015 HOH HOH . L 5 HOH D 16 2016 2016 HOH HOH . L 5 HOH D 17 2017 2017 HOH HOH . L 5 HOH D 18 2018 2018 HOH HOH . L 5 HOH D 19 2019 2019 HOH HOH . L 5 HOH D 20 2020 2020 HOH HOH . L 5 HOH D 21 2021 2021 HOH HOH . L 5 HOH D 22 2022 2022 HOH HOH . L 5 HOH D 23 2023 2023 HOH HOH . L 5 HOH D 24 2024 2024 HOH HOH . L 5 HOH D 25 2025 2025 HOH HOH . M 5 HOH E 1 2001 2001 HOH HOH . M 5 HOH E 2 2002 2002 HOH HOH . M 5 HOH E 3 2003 2003 HOH HOH . M 5 HOH E 4 2004 2004 HOH HOH . M 5 HOH E 5 2005 2005 HOH HOH . M 5 HOH E 6 2006 2006 HOH HOH . M 5 HOH E 7 2007 2007 HOH HOH . M 5 HOH E 8 2008 2008 HOH HOH . M 5 HOH E 9 2009 2009 HOH HOH . M 5 HOH E 10 2010 2010 HOH HOH . N 5 HOH F 1 2001 2001 HOH HOH . N 5 HOH F 2 2002 2002 HOH HOH . N 5 HOH F 3 2003 2003 HOH HOH . N 5 HOH F 4 2004 2004 HOH HOH . N 5 HOH F 5 2005 2005 HOH HOH . N 5 HOH F 6 2006 2006 HOH HOH . N 5 HOH F 7 2007 2007 HOH HOH . N 5 HOH F 8 2008 2008 HOH HOH . N 5 HOH F 9 2009 2009 HOH HOH . N 5 HOH F 10 2010 2010 HOH HOH . N 5 HOH F 11 2011 2011 HOH HOH . N 5 HOH F 12 2012 2012 HOH HOH . N 5 HOH F 13 2013 2013 HOH HOH . N 5 HOH F 14 2014 2014 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 10.892 _atom_site.Cartn_y -17.335 _atom_site.Cartn_z 16.554 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1224 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #