data_2JGS
#
_model_server_result.job_id            qRKtOihOu3wsEI6H1diEtg 
_model_server_result.datetime_utc      '2024-12-23 11:10:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2jgs 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1001}' 
#
_entry.id    2JGS 
#
_exptl.entry_id    2JGS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              244.311 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            BIOTIN 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          98.73 
_cell.angle_gamma         90 
_cell.entry_id            2JGS 
_cell.length_a            41.768 
_cell.length_b            79.309 
_cell.length_c            71.727 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2JGS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 41 A CYS 41 1_555 A SG CYS 96 A CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf2 B SG CYS 41 B CYS 41 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf3 C SG CYS 41 C CYS 41 1_555 C SG CYS 96 C CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
disulf ? disulf4 D SG CYS 41 D CYS 41 1_555 D SG CYS 96 D CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
#
_chem_comp.formula           'C10 H16 N2 O3 S' 
_chem_comp.formula_weight    244.311 
_chem_comp.id                BTN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              BIOTIN 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C11 O11 BTN doub 70 n n 
C11 O12 BTN sing 71 n n 
C11 C10 BTN sing 72 n n 
O12 HO2 BTN sing 73 n n 
C10 C9 BTN sing 74 n n 
C10 H101 BTN sing 75 n n 
C10 H102 BTN sing 76 n n 
C9 C8 BTN sing 77 n n 
C9 H91 BTN sing 78 n n 
C9 H92 BTN sing 79 n n 
C8 C7 BTN sing 80 n n 
C8 H81 BTN sing 81 n n 
C8 H82 BTN sing 82 n n 
C7 C2 BTN sing 83 n n 
C7 H71 BTN sing 84 n n 
C7 H72 BTN sing 85 n n 
C2 S1 BTN sing 86 n n 
C2 C4 BTN sing 87 n n 
C2 H2 BTN sing 88 n n 
S1 C6 BTN sing 89 n n 
C6 C5 BTN sing 90 n n 
C6 H61 BTN sing 91 n n 
C6 H62 BTN sing 92 n n 
C5 N1 BTN sing 93 n n 
C5 C4 BTN sing 94 n n 
C5 H5 BTN sing 95 n n 
N1 C3 BTN sing 96 n n 
N1 HN1 BTN sing 97 n n 
C3 O3 BTN doub 98 n n 
C3 N2 BTN sing 99 n n 
N2 C4 BTN sing 100 n n 
N2 HN2 BTN sing 101 n n 
C4 H4 BTN sing 102 n n 
#
_atom_sites.entry_id                     2JGS 
_atom_sites.fract_transf_matrix[1][1]    0.023942 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003676 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012609 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014105 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 BTN A 1 1001 1001 BTN BTN . 
F 2 BTN B 1 1001 1001 BTN BTN . 
G 2 BTN C 1 1001 1001 BTN BTN . 
H 2 BTN D 1 1001 1001 BTN BTN . 
I 3 HOH A 1 2001 2001 HOH HOH . 
I 3 HOH A 2 2002 2002 HOH HOH . 
I 3 HOH A 3 2003 2003 HOH HOH . 
I 3 HOH A 4 2004 2004 HOH HOH . 
I 3 HOH A 5 2005 2005 HOH HOH . 
I 3 HOH A 6 2006 2006 HOH HOH . 
I 3 HOH A 7 2007 2007 HOH HOH . 
I 3 HOH A 8 2008 2008 HOH HOH . 
I 3 HOH A 9 2009 2009 HOH HOH . 
I 3 HOH A 10 2010 2010 HOH HOH . 
I 3 HOH A 11 2011 2011 HOH HOH . 
I 3 HOH A 12 2012 2012 HOH HOH . 
I 3 HOH A 13 2013 2013 HOH HOH . 
I 3 HOH A 14 2014 2014 HOH HOH . 
I 3 HOH A 15 2015 2015 HOH HOH . 
I 3 HOH A 16 2016 2016 HOH HOH . 
I 3 HOH A 17 2017 2017 HOH HOH . 
I 3 HOH A 18 2018 2018 HOH HOH . 
I 3 HOH A 19 2019 2019 HOH HOH . 
I 3 HOH A 20 2020 2020 HOH HOH . 
I 3 HOH A 21 2021 2021 HOH HOH . 
I 3 HOH A 22 2022 2022 HOH HOH . 
I 3 HOH A 23 2023 2023 HOH HOH . 
I 3 HOH A 24 2024 2024 HOH HOH . 
I 3 HOH A 25 2025 2025 HOH HOH . 
I 3 HOH A 26 2026 2026 HOH HOH . 
I 3 HOH A 27 2027 2027 HOH HOH . 
I 3 HOH A 28 2028 2028 HOH HOH . 
I 3 HOH A 29 2029 2029 HOH HOH . 
I 3 HOH A 30 2030 2030 HOH HOH . 
I 3 HOH A 31 2031 2031 HOH HOH . 
I 3 HOH A 32 2032 2032 HOH HOH . 
I 3 HOH A 33 2033 2033 HOH HOH . 
I 3 HOH A 34 2034 2034 HOH HOH . 
I 3 HOH A 35 2035 2035 HOH HOH . 
I 3 HOH A 36 2036 2036 HOH HOH . 
I 3 HOH A 37 2037 2037 HOH HOH . 
I 3 HOH A 38 2038 2038 HOH HOH . 
I 3 HOH A 39 2039 2039 HOH HOH . 
I 3 HOH A 40 2040 2040 HOH HOH . 
I 3 HOH A 41 2041 2041 HOH HOH . 
I 3 HOH A 42 2042 2042 HOH HOH . 
I 3 HOH A 43 2043 2043 HOH HOH . 
J 3 HOH B 1 2001 2001 HOH HOH . 
J 3 HOH B 2 2002 2002 HOH HOH . 
J 3 HOH B 3 2003 2003 HOH HOH . 
J 3 HOH B 4 2004 2004 HOH HOH . 
J 3 HOH B 5 2005 2005 HOH HOH . 
J 3 HOH B 6 2006 2006 HOH HOH . 
J 3 HOH B 7 2007 2007 HOH HOH . 
J 3 HOH B 8 2008 2008 HOH HOH . 
J 3 HOH B 9 2009 2009 HOH HOH . 
J 3 HOH B 10 2010 2010 HOH HOH . 
J 3 HOH B 11 2011 2011 HOH HOH . 
J 3 HOH B 12 2012 2012 HOH HOH . 
J 3 HOH B 13 2013 2013 HOH HOH . 
J 3 HOH B 14 2014 2014 HOH HOH . 
J 3 HOH B 15 2015 2015 HOH HOH . 
J 3 HOH B 16 2016 2016 HOH HOH . 
J 3 HOH B 17 2017 2017 HOH HOH . 
J 3 HOH B 18 2018 2018 HOH HOH . 
J 3 HOH B 19 2019 2019 HOH HOH . 
J 3 HOH B 20 2020 2020 HOH HOH . 
J 3 HOH B 21 2021 2021 HOH HOH . 
J 3 HOH B 22 2022 2022 HOH HOH . 
J 3 HOH B 23 2023 2023 HOH HOH . 
J 3 HOH B 24 2024 2024 HOH HOH . 
J 3 HOH B 25 2025 2025 HOH HOH . 
J 3 HOH B 26 2026 2026 HOH HOH . 
J 3 HOH B 27 2027 2027 HOH HOH . 
J 3 HOH B 28 2028 2028 HOH HOH . 
J 3 HOH B 29 2029 2029 HOH HOH . 
J 3 HOH B 30 2030 2030 HOH HOH . 
J 3 HOH B 31 2031 2031 HOH HOH . 
J 3 HOH B 32 2032 2032 HOH HOH . 
J 3 HOH B 33 2033 2033 HOH HOH . 
J 3 HOH B 34 2034 2034 HOH HOH . 
J 3 HOH B 35 2035 2035 HOH HOH . 
J 3 HOH B 36 2036 2036 HOH HOH . 
K 3 HOH C 1 2001 2001 HOH HOH . 
K 3 HOH C 2 2002 2002 HOH HOH . 
K 3 HOH C 3 2003 2003 HOH HOH . 
K 3 HOH C 4 2004 2004 HOH HOH . 
K 3 HOH C 5 2005 2005 HOH HOH . 
K 3 HOH C 6 2006 2006 HOH HOH . 
K 3 HOH C 7 2007 2007 HOH HOH . 
K 3 HOH C 8 2008 2008 HOH HOH . 
K 3 HOH C 9 2009 2009 HOH HOH . 
K 3 HOH C 10 2010 2010 HOH HOH . 
K 3 HOH C 11 2011 2011 HOH HOH . 
K 3 HOH C 12 2012 2012 HOH HOH . 
K 3 HOH C 13 2013 2013 HOH HOH . 
K 3 HOH C 14 2014 2014 HOH HOH . 
K 3 HOH C 15 2015 2015 HOH HOH . 
K 3 HOH C 16 2016 2016 HOH HOH . 
K 3 HOH C 17 2017 2017 HOH HOH . 
K 3 HOH C 18 2018 2018 HOH HOH . 
K 3 HOH C 19 2019 2019 HOH HOH . 
K 3 HOH C 20 2020 2020 HOH HOH . 
K 3 HOH C 21 2021 2021 HOH HOH . 
K 3 HOH C 22 2022 2022 HOH HOH . 
K 3 HOH C 23 2023 2023 HOH HOH . 
K 3 HOH C 24 2024 2024 HOH HOH . 
K 3 HOH C 25 2025 2025 HOH HOH . 
K 3 HOH C 26 2026 2026 HOH HOH . 
K 3 HOH C 27 2027 2027 HOH HOH . 
K 3 HOH C 28 2028 2028 HOH HOH . 
K 3 HOH C 29 2029 2029 HOH HOH . 
K 3 HOH C 30 2030 2030 HOH HOH . 
K 3 HOH C 31 2031 2031 HOH HOH . 
K 3 HOH C 32 2032 2032 HOH HOH . 
K 3 HOH C 33 2033 2033 HOH HOH . 
K 3 HOH C 34 2034 2034 HOH HOH . 
K 3 HOH C 35 2035 2035 HOH HOH . 
K 3 HOH C 36 2036 2036 HOH HOH . 
K 3 HOH C 37 2037 2037 HOH HOH . 
K 3 HOH C 38 2038 2038 HOH HOH . 
L 3 HOH D 1 2001 2001 HOH HOH . 
L 3 HOH D 2 2002 2002 HOH HOH . 
L 3 HOH D 3 2003 2003 HOH HOH . 
L 3 HOH D 4 2004 2004 HOH HOH . 
L 3 HOH D 5 2005 2005 HOH HOH . 
L 3 HOH D 6 2006 2006 HOH HOH . 
L 3 HOH D 7 2007 2007 HOH HOH . 
L 3 HOH D 8 2008 2008 HOH HOH . 
L 3 HOH D 9 2009 2009 HOH HOH . 
L 3 HOH D 10 2010 2010 HOH HOH . 
L 3 HOH D 11 2011 2011 HOH HOH . 
L 3 HOH D 12 2012 2012 HOH HOH . 
L 3 HOH D 13 2013 2013 HOH HOH . 
L 3 HOH D 14 2014 2014 HOH HOH . 
L 3 HOH D 15 2015 2015 HOH HOH . 
L 3 HOH D 16 2016 2016 HOH HOH . 
L 3 HOH D 17 2017 2017 HOH HOH . 
L 3 HOH D 18 2018 2018 HOH HOH . 
L 3 HOH D 19 2019 2019 HOH HOH . 
L 3 HOH D 20 2020 2020 HOH HOH . 
L 3 HOH D 21 2021 2021 HOH HOH . 
L 3 HOH D 22 2022 2022 HOH HOH . 
L 3 HOH D 23 2023 2023 HOH HOH . 
L 3 HOH D 24 2024 2024 HOH HOH . 
L 3 HOH D 25 2025 2025 HOH HOH . 
L 3 HOH D 26 2026 2026 HOH HOH . 
L 3 HOH D 27 2027 2027 HOH HOH . 
L 3 HOH D 28 2028 2028 HOH HOH . 
L 3 HOH D 29 2029 2029 HOH HOH . 
L 3 HOH D 30 2030 2030 HOH HOH . 
L 3 HOH D 31 2031 2031 HOH HOH . 
L 3 HOH D 32 2032 2032 HOH HOH . 
L 3 HOH D 33 2033 2033 HOH HOH . 
L 3 HOH D 34 2034 2034 HOH HOH . 
L 3 HOH D 35 2035 2035 HOH HOH . 
L 3 HOH D 36 2036 2036 HOH HOH . 
L 3 HOH D 37 2037 2037 HOH HOH . 
L 3 HOH D 38 2038 2038 HOH HOH . 
L 3 HOH D 39 2039 2039 HOH HOH . 
L 3 HOH D 40 2040 2040 HOH HOH . 
L 3 HOH D 41 2041 2041 HOH HOH . 
L 3 HOH D 42 2042 2042 HOH HOH . 
L 3 HOH D 43 2043 2043 HOH HOH . 
L 3 HOH D 44 2044 2044 HOH HOH . 
L 3 HOH D 45 2045 2045 HOH HOH . 
L 3 HOH D 46 2046 2046 HOH HOH . 
L 3 HOH D 47 2047 2047 HOH HOH . 
L 3 HOH D 48 2048 2048 HOH HOH . 
L 3 HOH D 49 2049 2049 HOH HOH . 
L 3 HOH D 50 2050 2050 HOH HOH . 
L 3 HOH D 51 2051 2051 HOH HOH . 
L 3 HOH D 52 2052 2052 HOH HOH . 
L 3 HOH D 53 2053 2053 HOH HOH . 
L 3 HOH D 54 2054 2054 HOH HOH . 
L 3 HOH D 55 2055 2055 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C11 BTN . . . E 2 40.976 9.822 50.302 1 8.53 ? C11 BTN 1001 A 1 
HETATM 2 O O11 BTN . . . E 2 41.435 8.949 49.541 1 7.25 ? O11 BTN 1001 A 1 
HETATM 3 O O12 BTN . . . E 2 41.302 9.776 51.515 1 12.14 ? O12 BTN 1001 A 1 
HETATM 4 C C10 BTN . . . E 2 40.08 10.926 49.768 1 4.12 ? C10 BTN 1001 A 1 
HETATM 5 C C9 BTN . . . E 2 39.486 11.722 50.935 1 2 ? C9 BTN 1001 A 1 
HETATM 6 C C8 BTN . . . E 2 38.206 11.044 51.421 1 2 ? C8 BTN 1001 A 1 
HETATM 7 C C7 BTN . . . E 2 37.379 12.051 52.178 1 2 ? C7 BTN 1001 A 1 
HETATM 8 C C2 BTN . . . E 2 36.164 11.344 52.751 1 2 ? C2 BTN 1001 A 1 
HETATM 9 S S1 BTN . . . E 2 34.953 11.17 51.579 1 2 ? S1 BTN 1001 A 1 
HETATM 10 C C6 BTN . . . E 2 33.792 10.847 52.93 1 2 ? C6 BTN 1001 A 1 
HETATM 11 C C5 BTN . . . E 2 34.186 11.68 54.137 1 2 ? C5 BTN 1001 A 1 
HETATM 12 N N1 BTN . . . E 2 33.55 12.983 54.11 1 2 ? N1 BTN 1001 A 1 
HETATM 13 C C3 BTN . . . E 2 34.44 13.97 53.995 1 2 ? C3 BTN 1001 A 1 
HETATM 14 O O3 BTN . . . E 2 34.105 15.32 53.981 1 2 ? O3 BTN 1001 A 1 
HETATM 15 N N2 BTN . . . E 2 35.678 13.511 53.926 1 2 ? N2 BTN 1001 A 1 
HETATM 16 C C4 BTN . . . E 2 35.659 12.06 54.001 1 2 ? C4 BTN 1001 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           16 
#