data_2JH5 # _model_server_result.job_id 4PCNiiEO5qLKq38Qt7mzEA _model_server_result.datetime_utc '2024-12-27 00:28:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2jh5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1249}' # _entry.id 2JH5 # _exptl.entry_id 2JH5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 447.957 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-(5-CHLORO-2-THIENYL)-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}ETHENESULFONAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.62 _cell.angle_gamma 90 _cell.entry_id 2JH5 _cell.length_a 70.363 _cell.length_b 71.478 _cell.length_c 72.106 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JH5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 9 C CYS 1 1_555 B SG CYS 119 D CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 B SG CYS 28 D CYS 42 1_555 B SG CYS 44 D CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf3 B SG CYS 173 D CYS 168 1_555 B SG CYS 187 D CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 B SG CYS 201 D CYS 191 1_555 B SG CYS 231 D CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? covale ? covale1 C C GLU 8 H GLU 62 1_555 C N TYS 9 H TYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 C C TYS 9 H TYS 63 1_555 C N LEU 10 H LEU 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? metalc ? metalc1 B O LYS 174 D LYS 169 1_555 D CA CA . D CA 1247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc2 B O THR 177 D THR 172 1_555 D CA CA . D CA 1247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc3 B O PHE 215 D PHE 204 4_546 D CA CA . D CA 1247 1_555 A ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc4 B O ARG 233 D ARG 221 1_555 E NA NA . D NA 1248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? metalc ? metalc5 B O LYS 236 D LYS 224 1_555 E NA NA . D NA 1248 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? metalc ? metalc6 D CA CA . D CA 1247 1_555 H O HOH . D HOH 2098 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc7 E NA NA . D NA 1248 1_555 H O HOH . D HOH 2082 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.552 ? metalc ? metalc8 E NA NA . D NA 1248 1_555 H O HOH . D HOH 2083 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? metalc ? metalc9 E NA NA . D NA 1248 1_555 H O HOH . D HOH 2092 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc10 E NA NA . D NA 1248 1_555 H O HOH . D HOH 2103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? # _chem_comp.formula 'C17 H22 Cl N3 O5 S2' _chem_comp.formula_weight 447.957 _chem_comp.id 895 _chem_comp.mon_nstd_flag . _chem_comp.name 2-(5-CHLORO-2-THIENYL)-N-{(3S)-1-[(1S)-1-METHYL-2-MORPHOLIN-4-YL-2-OXOETHYL]-2-OXOPYRROLIDIN-3-YL}ETHENESULFONAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL1 C1 895 sing 1 n n C1 C2 895 doub 2 n n C2 C3 895 sing 3 n n C3 C4 895 doub 4 n n C4 C9 895 sing 5 n n S1 O2 895 doub 6 n n S1 O1 895 doub 7 n n S1 N1 895 sing 8 n n N1 C12 895 sing 9 n n C12 C13 895 sing 10 n n C13 C14 895 sing 11 n n C12 C15 895 sing 12 n n C15 O3 895 doub 13 n n C14 N2 895 sing 14 n n C15 N2 895 sing 15 n n N2 C16 895 sing 16 n n C16 C17 895 sing 17 n n C16 C18 895 sing 18 n n C18 O4 895 doub 19 n n C18 N3 895 sing 20 n n N3 C19 895 sing 21 n n C19 C20 895 sing 22 n n C20 O5 895 sing 23 n n O5 C22 895 sing 24 n n N3 C23 895 sing 25 n n C22 C23 895 sing 26 n n C1 S6 895 sing 27 n n C4 S6 895 sing 28 n n C9 C6 895 doub 29 n n S1 C6 895 sing 30 n n C2 H2 895 sing 31 n n C3 H3 895 sing 32 n n C6 H6 895 sing 33 n n C9 H9 895 sing 34 n n N1 H1 895 sing 35 n n C12 H12 895 sing 36 n n C13 H131 895 sing 37 n n C13 H132 895 sing 38 n n C14 H141 895 sing 39 n n C14 H142 895 sing 40 n n C16 H16 895 sing 41 n n C17 H171 895 sing 42 n n C17 H172 895 sing 43 n n C17 H173 895 sing 44 n n C19 H191 895 sing 45 n n C19 H192 895 sing 46 n n C23 H231 895 sing 47 n n C23 H232 895 sing 48 n n C20 H201 895 sing 49 n n C20 H202 895 sing 50 n n C22 H221 895 sing 51 n n C22 H222 895 sing 52 n n # _atom_sites.entry_id 2JH5 _atom_sites.fract_transf_matrix[1][1] 0.014212 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002665 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01399 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01411 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 CA D 1 1247 1247 CA CA . E 5 NA D 1 1248 1248 NA NA . F 6 895 D 1 1249 1249 895 895 . G 7 HOH C 1 2001 2001 HOH HOH . G 7 HOH C 2 2002 2002 HOH HOH . G 7 HOH C 3 2003 2003 HOH HOH . G 7 HOH C 4 2004 2004 HOH HOH . G 7 HOH C 5 2005 2005 HOH HOH . G 7 HOH C 6 2006 2006 HOH HOH . G 7 HOH C 7 2007 2007 HOH HOH . G 7 HOH C 8 2008 2008 HOH HOH . G 7 HOH C 9 2009 2009 HOH HOH . G 7 HOH C 10 2010 2010 HOH HOH . G 7 HOH C 11 2011 2011 HOH HOH . G 7 HOH C 12 2012 2012 HOH HOH . G 7 HOH C 13 2013 2013 HOH HOH . G 7 HOH C 14 2014 2014 HOH HOH . G 7 HOH C 15 2015 2015 HOH HOH . G 7 HOH C 16 2016 2016 HOH HOH . H 7 HOH D 1 2001 2001 HOH HOH . H 7 HOH D 2 2002 2002 HOH HOH . H 7 HOH D 3 2003 2003 HOH HOH . H 7 HOH D 4 2004 2004 HOH HOH . H 7 HOH D 5 2005 2005 HOH HOH . H 7 HOH D 6 2006 2006 HOH HOH . H 7 HOH D 7 2007 2007 HOH HOH . H 7 HOH D 8 2008 2008 HOH HOH . H 7 HOH D 9 2009 2009 HOH HOH . H 7 HOH D 10 2010 2010 HOH HOH . H 7 HOH D 11 2011 2011 HOH HOH . H 7 HOH D 12 2012 2012 HOH HOH . H 7 HOH D 13 2013 2013 HOH HOH . H 7 HOH D 14 2014 2014 HOH HOH . H 7 HOH D 15 2015 2015 HOH HOH . H 7 HOH D 16 2016 2016 HOH HOH . H 7 HOH D 17 2017 2017 HOH HOH . H 7 HOH D 18 2018 2018 HOH HOH . H 7 HOH D 19 2019 2019 HOH HOH . H 7 HOH D 20 2020 2020 HOH HOH . H 7 HOH D 21 2021 2021 HOH HOH . H 7 HOH D 22 2022 2022 HOH HOH . H 7 HOH D 23 2023 2023 HOH HOH . H 7 HOH D 24 2024 2024 HOH HOH . H 7 HOH D 25 2025 2025 HOH HOH . H 7 HOH D 26 2026 2026 HOH HOH . H 7 HOH D 27 2027 2027 HOH HOH . H 7 HOH D 28 2028 2028 HOH HOH . H 7 HOH D 29 2029 2029 HOH HOH . H 7 HOH D 30 2030 2030 HOH HOH . H 7 HOH D 31 2031 2031 HOH HOH . H 7 HOH D 32 2032 2032 HOH HOH . H 7 HOH D 33 2033 2033 HOH HOH . H 7 HOH D 34 2034 2034 HOH HOH . H 7 HOH D 35 2035 2035 HOH HOH . H 7 HOH D 36 2036 2036 HOH HOH . H 7 HOH D 37 2037 2037 HOH HOH . H 7 HOH D 38 2038 2038 HOH HOH . H 7 HOH D 39 2039 2039 HOH HOH . H 7 HOH D 40 2040 2040 HOH HOH . H 7 HOH D 41 2041 2041 HOH HOH . H 7 HOH D 42 2042 2042 HOH HOH . H 7 HOH D 43 2043 2043 HOH HOH . H 7 HOH D 44 2044 2044 HOH HOH . H 7 HOH D 45 2045 2045 HOH HOH . H 7 HOH D 46 2046 2046 HOH HOH . H 7 HOH D 47 2047 2047 HOH HOH . H 7 HOH D 48 2048 2048 HOH HOH . H 7 HOH D 49 2049 2049 HOH HOH . H 7 HOH D 50 2050 2050 HOH HOH . H 7 HOH D 51 2051 2051 HOH HOH . H 7 HOH D 52 2052 2052 HOH HOH . H 7 HOH D 53 2053 2053 HOH HOH . H 7 HOH D 54 2054 2054 HOH HOH . H 7 HOH D 55 2055 2055 HOH HOH . H 7 HOH D 56 2056 2056 HOH HOH . H 7 HOH D 57 2057 2057 HOH HOH . H 7 HOH D 58 2058 2058 HOH HOH . H 7 HOH D 59 2059 2059 HOH HOH . H 7 HOH D 60 2060 2060 HOH HOH . H 7 HOH D 61 2061 2061 HOH HOH . H 7 HOH D 62 2062 2062 HOH HOH . H 7 HOH D 63 2063 2063 HOH HOH . H 7 HOH D 64 2064 2064 HOH HOH . H 7 HOH D 65 2065 2065 HOH HOH . H 7 HOH D 66 2066 2066 HOH HOH . H 7 HOH D 67 2067 2067 HOH HOH . H 7 HOH D 68 2068 2068 HOH HOH . H 7 HOH D 69 2069 2069 HOH HOH . H 7 HOH D 70 2070 2070 HOH HOH . H 7 HOH D 71 2071 2071 HOH HOH . H 7 HOH D 72 2072 2072 HOH HOH . H 7 HOH D 73 2073 2073 HOH HOH . H 7 HOH D 74 2074 2074 HOH HOH . H 7 HOH D 75 2075 2075 HOH HOH . H 7 HOH D 76 2076 2076 HOH HOH . H 7 HOH D 77 2077 2077 HOH HOH . H 7 HOH D 78 2078 2078 HOH HOH . H 7 HOH D 79 2079 2079 HOH HOH . H 7 HOH D 80 2080 2080 HOH HOH . H 7 HOH D 81 2081 2081 HOH HOH . H 7 HOH D 82 2082 2082 HOH HOH . H 7 HOH D 83 2083 2083 HOH HOH . H 7 HOH D 84 2084 2084 HOH HOH . H 7 HOH D 85 2085 2085 HOH HOH . H 7 HOH D 86 2086 2086 HOH HOH . H 7 HOH D 87 2087 2087 HOH HOH . H 7 HOH D 88 2088 2088 HOH HOH . H 7 HOH D 89 2089 2089 HOH HOH . H 7 HOH D 90 2090 2090 HOH HOH . H 7 HOH D 91 2091 2091 HOH HOH . H 7 HOH D 92 2092 2092 HOH HOH . H 7 HOH D 93 2093 2093 HOH HOH . H 7 HOH D 94 2094 2094 HOH HOH . H 7 HOH D 95 2095 2095 HOH HOH . H 7 HOH D 96 2096 2096 HOH HOH . H 7 HOH D 97 2097 2097 HOH HOH . H 7 HOH D 98 2098 2098 HOH HOH . H 7 HOH D 99 2099 2099 HOH HOH . H 7 HOH D 100 2100 2100 HOH HOH . H 7 HOH D 101 2101 2101 HOH HOH . H 7 HOH D 102 2102 2102 HOH HOH . H 7 HOH D 103 2103 2103 HOH HOH . H 7 HOH D 104 2104 2104 HOH HOH . H 7 HOH D 105 2105 2105 HOH HOH . H 7 HOH D 106 2106 2106 HOH HOH . H 7 HOH D 107 2107 2107 HOH HOH . H 7 HOH D 108 2108 2108 HOH HOH . H 7 HOH D 109 2109 2109 HOH HOH . H 7 HOH D 110 2110 2110 HOH HOH . I 7 HOH H 1 2001 2001 HOH HOH . I 7 HOH H 2 2002 2002 HOH HOH . I 7 HOH H 3 2003 2003 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL1 895 . . . F 6 9.846 25.266 46.266 1 30.87 ? CL1 895 1249 D 1 HETATM 2 C C1 895 . . . F 6 10.093 23.744 47.019 1 31.61 ? C1 895 1249 D 1 HETATM 3 C C2 895 . . . F 6 11.013 22.772 46.603 1 29.28 ? C2 895 1249 D 1 HETATM 4 C C3 895 . . . F 6 10.959 21.655 47.457 1 30.54 ? C3 895 1249 D 1 HETATM 5 C C4 895 . . . F 6 10.019 21.788 48.492 1 32.02 ? C4 895 1249 D 1 HETATM 6 C C9 895 . . . F 6 9.712 20.781 49.552 1 34.17 ? C9 895 1249 D 1 HETATM 7 S S1 895 . . . F 6 9.477 18.151 50.26 1 41.32 ? S1 895 1249 D 1 HETATM 8 O O2 895 . . . F 6 10.171 18.257 51.508 1 37.91 ? O2 895 1249 D 1 HETATM 9 O O1 895 . . . F 6 9.62 16.996 49.427 1 38.57 ? O1 895 1249 D 1 HETATM 10 N N1 895 . . . F 6 7.913 18.434 50.61 1 38.88 ? N1 895 1249 D 1 HETATM 11 C C12 895 . . . F 6 6.907 17.934 49.7 1 42.31 ? C12 895 1249 D 1 HETATM 12 C C13 895 . . . F 6 5.96 16.93 50.384 1 45.23 ? C13 895 1249 D 1 HETATM 13 C C14 895 . . . F 6 4.559 17.285 49.864 1 45.79 ? C14 895 1249 D 1 HETATM 14 C C15 895 . . . F 6 6.027 18.985 49.071 1 45.11 ? C15 895 1249 D 1 HETATM 15 O O3 895 . . . F 6 6.408 20.086 48.695 1 43.97 ? O3 895 1249 D 1 HETATM 16 N N2 895 . . . F 6 4.779 18.454 49.006 1 47.33 ? N2 895 1249 D 1 HETATM 17 C C16 895 . . . F 6 3.722 18.992 48.148 1 49.77 ? C16 895 1249 D 1 HETATM 18 C C17 895 . . . F 6 3.673 18.182 46.843 1 49.88 ? C17 895 1249 D 1 HETATM 19 C C18 895 . . . F 6 2.35 19.029 48.833 1 52.65 ? C18 895 1249 D 1 HETATM 20 O O4 895 . . . F 6 1.424 18.389 48.326 1 52.22 ? O4 895 1249 D 1 HETATM 21 N N3 895 . . . F 6 2.24 19.786 49.996 1 52.75 ? N3 895 1249 D 1 HETATM 22 C C19 895 . . . F 6 0.981 19.796 50.75 1 49.33 ? C19 895 1249 D 1 HETATM 23 C C20 895 . . . F 6 1.169 19.767 52.271 1 49.59 ? C20 895 1249 D 1 HETATM 24 O O5 895 . . . F 6 2.184 20.669 52.712 1 50.55 ? O5 895 1249 D 1 HETATM 25 C C22 895 . . . F 6 3.442 20.418 52.089 1 50.79 ? C22 895 1249 D 1 HETATM 26 C C23 895 . . . F 6 3.285 20.66 50.578 1 52.09 ? C23 895 1249 D 1 HETATM 27 S S6 895 . . . F 6 9.234 23.276 48.421 1 29.91 ? S6 895 1249 D 1 HETATM 28 C C6 895 . . . F 6 9.927 19.486 49.239 1 40.23 ? C6 895 1249 D 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #