data_2JHA
#
_model_server_result.job_id            K7DL3eOV11THaS1af89a2w 
_model_server_result.datetime_utc      '2025-04-14 02:08:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2jha 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1645}' 
#
_entry.id    2JHA 
#
_exptl.entry_id    2JHA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              788.406 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "DIGUANOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2JHA 
_cell.length_a            75.4 
_cell.length_b            75.4 
_cell.length_c            422.47 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2JHA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C20 H27 N10 O18 P3' 
_chem_comp.formula_weight    788.406 
_chem_comp.id                GP3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "DIGUANOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N9A C8A GP3 sing 129 n y 
N9A C4A GP3 sing 130 n y 
N9A C1D GP3 sing 131 n n 
C8A N7A GP3 doub 132 n y 
C8A H8A GP3 sing 133 n n 
N7A C5A GP3 sing 134 n y 
C5A C6A GP3 sing 135 n n 
C5A C4A GP3 doub 136 n y 
C6A O6A GP3 doub 137 n n 
C6A N1A GP3 sing 138 n n 
N1A C2A GP3 sing 139 n n 
N1A H1A GP3 sing 140 n n 
C2A N2A GP3 sing 141 n n 
C2A N3A GP3 doub 142 n n 
N2A H21A GP3 sing 143 n n 
N2A H22A GP3 sing 144 n n 
N3A C4A GP3 sing 145 n n 
O5D C5D GP3 sing 146 n n 
O5D PA GP3 sing 147 n n 
C5D C4D GP3 sing 148 n n 
C5D H51A GP3 sing 149 n n 
C5D H52A GP3 sing 150 n n 
C4D O4D GP3 sing 151 n n 
C4D C3D GP3 sing 152 n n 
C4D H4D GP3 sing 153 n n 
O4D C1D GP3 sing 154 n n 
C3D O3D GP3 sing 155 n n 
C3D C2D GP3 sing 156 n n 
C3D H3D GP3 sing 157 n n 
O3D HO3A GP3 sing 158 n n 
C2D O2D GP3 sing 159 n n 
C2D C1D GP3 sing 160 n n 
C2D H2D GP3 sing 161 n n 
O2D HO2A GP3 sing 162 n n 
C1D H1D GP3 sing 163 n n 
PA O1A GP3 doub 164 n n 
PA O2A GP3 sing 165 n n 
PA O3A GP3 sing 166 n n 
O2A HOA2 GP3 sing 167 n n 
O3A PB GP3 sing 168 n n 
PB O1B GP3 doub 169 n n 
PB O2B GP3 sing 170 n n 
PB O3B GP3 sing 171 n n 
O2B HOB2 GP3 sing 172 n n 
O3B PG GP3 sing 173 n n 
PG O1G GP3 doub 174 n n 
PG O2G GP3 sing 175 n n 
PG O5E GP3 sing 176 n n 
O2G HOG2 GP3 sing 177 n n 
O5E C5E GP3 sing 178 n n 
C5E C4E GP3 sing 179 n n 
C5E H51B GP3 sing 180 n n 
C5E H52B GP3 sing 181 n n 
C4E O4E GP3 sing 182 n n 
C4E C3E GP3 sing 183 n n 
C4E H4E GP3 sing 184 n n 
O4E C1E GP3 sing 185 n n 
C3E O3E GP3 sing 186 n n 
C3E C2E GP3 sing 187 n n 
C3E H3E GP3 sing 188 n n 
O3E HO3B GP3 sing 189 n n 
C2E O2E GP3 sing 190 n n 
C2E C1E GP3 sing 191 n n 
C2E H2E GP3 sing 192 n n 
O2E HO2B GP3 sing 193 n n 
C1E N9B GP3 sing 194 n n 
C1E H1E GP3 sing 195 n n 
N9B C8B GP3 sing 196 n y 
N9B C4B GP3 sing 197 n y 
C8B N7B GP3 doub 198 n y 
C8B H8B GP3 sing 199 n n 
N7B C5B GP3 sing 200 n y 
C5B C6B GP3 sing 201 n n 
C5B C4B GP3 doub 202 n y 
C6B O6B GP3 doub 203 n n 
C6B N1B GP3 sing 204 n n 
N1B C2B GP3 sing 205 n n 
N1B H1B GP3 sing 206 n n 
C2B N2B GP3 sing 207 n n 
C2B N3B GP3 doub 208 n n 
N2B H21B GP3 sing 209 n n 
N2B H22B GP3 sing 210 n n 
N3B C4B GP3 sing 211 n n 
#
_atom_sites.entry_id                     2JHA 
_atom_sites.fract_transf_matrix[1][1]    0.013263 
_atom_sites.fract_transf_matrix[1][2]    0.007657 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015314 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002367 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GP3 A 1 1645 1645 GP3 GP3 . 
C 3 GUN A 1 1646 1646 GUN GUN . 
D 3 GUN A 1 1647 1647 GUN GUN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N9A GP3 . . . B 2 60.8 25.686 219.034 1 187.28 ? N9A GP3 1645 A 1 
HETATM 2 C C8A GP3 . . . B 2 60.468 24.629 219.802 1 187.7 ? C8A GP3 1645 A 1 
HETATM 3 N N7A GP3 . . . B 2 59.997 25.065 220.977 1 188.06 ? N7A GP3 1645 A 1 
HETATM 4 C C5A GP3 . . . B 2 60.019 26.407 220.964 1 187.91 ? C5A GP3 1645 A 1 
HETATM 5 C C6A GP3 . . . B 2 59.647 27.364 221.912 1 187.38 ? C6A GP3 1645 A 1 
HETATM 6 O O6A GP3 . . . B 2 59.197 27.01 223.008 1 187.27 ? O6A GP3 1645 A 1 
HETATM 7 N N1A GP3 . . . B 2 59.796 28.736 221.586 1 187.35 ? N1A GP3 1645 A 1 
HETATM 8 C C2A GP3 . . . B 2 60.314 29.103 220.319 1 187.49 ? C2A GP3 1645 A 1 
HETATM 9 N N2A GP3 . . . B 2 60.463 30.398 219.989 1 187.44 ? N2A GP3 1645 A 1 
HETATM 10 N N3A GP3 . . . B 2 60.661 28.143 219.435 1 187.7 ? N3A GP3 1645 A 1 
HETATM 11 C C4A GP3 . . . B 2 60.529 26.816 219.72 1 187.9 ? C4A GP3 1645 A 1 
HETATM 12 O O5D GP3 . . . B 2 64.194 22.761 218.136 1 181.48 ? O5D GP3 1645 A 1 
HETATM 13 C C5D GP3 . . . B 2 63.953 23.072 216.749 1 182.56 ? C5D GP3 1645 A 1 
HETATM 14 C C4D GP3 . . . B 2 62.991 24.256 216.584 1 183.4 ? C4D GP3 1645 A 1 
HETATM 15 O O4D GP3 . . . B 2 61.884 24.153 217.486 1 184.04 ? O4D GP3 1645 A 1 
HETATM 16 C C3D GP3 . . . B 2 63.681 25.538 217.016 1 183.78 ? C3D GP3 1645 A 1 
HETATM 17 O O3D GP3 . . . B 2 64.459 26.048 215.931 1 183.39 ? O3D GP3 1645 A 1 
HETATM 18 C C2D GP3 . . . B 2 62.494 26.45 217.26 1 184.46 ? C2D GP3 1645 A 1 
HETATM 19 O O2D GP3 . . . B 2 62.147 27.108 216.038 1 184.58 ? O2D GP3 1645 A 1 
HETATM 20 C C1D GP3 . . . B 2 61.353 25.497 217.637 1 186.21 ? C1D GP3 1645 A 1 
HETATM 21 P PA GP3 . . . B 2 65.234 21.599 218.576 1 180.62 ? PA GP3 1645 A 1 
HETATM 22 O O1A GP3 . . . B 2 65.876 21.036 217.359 1 180.54 ? O1A GP3 1645 A 1 
HETATM 23 O O2A GP3 . . . B 2 66.079 22.111 219.695 1 180.16 ? O2A GP3 1645 A 1 
HETATM 24 O O3A GP3 . . . B 2 64.256 20.443 219.176 1 180.41 ? O3A GP3 1645 A 1 
HETATM 25 P PB GP3 . . . B 2 62.735 20.188 218.615 1 180.36 ? PB GP3 1645 A 1 
HETATM 26 O O1B GP3 . . . B 2 62.345 18.81 218.285 1 180.62 ? O1B GP3 1645 A 1 
HETATM 27 O O2B GP3 . . . B 2 61.747 21.303 218.72 1 180.4 ? O2B GP3 1645 A 1 
HETATM 28 O O3B GP3 . . . B 2 62.458 19.875 220.209 1 181.03 ? O3B GP3 1645 A 1 
HETATM 29 P PG GP3 . . . B 2 61.024 19.576 220.985 1 181.4 ? PG GP3 1645 A 1 
HETATM 30 O O1G GP3 . . . B 2 60.197 20.81 221.052 1 181.36 ? O1G GP3 1645 A 1 
HETATM 31 O O2G GP3 . . . B 2 60.413 18.341 220.447 1 181.9 ? O2G GP3 1645 A 1 
HETATM 32 O O5E GP3 . . . B 2 61.599 19.24 222.494 1 180.76 ? O5E GP3 1645 A 1 
HETATM 33 C C5E GP3 . . . B 2 61.758 17.89 222.983 1 180.43 ? C5E GP3 1645 A 1 
HETATM 34 C C4E GP3 . . . B 2 63.184 17.269 222.756 1 180.75 ? C4E GP3 1645 A 1 
HETATM 35 O O4E GP3 . . . B 2 63.073 16.014 222.004 1 180.75 ? O4E GP3 1645 A 1 
HETATM 36 C C3E GP3 . . . B 2 64.263 18.064 221.968 1 180.93 ? C3E GP3 1645 A 1 
HETATM 37 O O3E GP3 . . . B 2 65.189 18.634 222.908 1 181.67 ? O3E GP3 1645 A 1 
HETATM 38 C C2E GP3 . . . B 2 64.937 17.001 221.039 1 180.61 ? C2E GP3 1645 A 1 
HETATM 39 O O2E GP3 . . . B 2 66.377 16.999 221.055 1 180.06 ? O2E GP3 1645 A 1 
HETATM 40 C C1E GP3 . . . B 2 64.456 15.695 221.653 1 180.09 ? C1E GP3 1645 A 1 
HETATM 41 N N9B GP3 . . . B 2 64.611 14.55 220.698 1 179.96 ? N9B GP3 1645 A 1 
HETATM 42 C C8B GP3 . . . B 2 65.424 13.501 220.872 1 179.71 ? C8B GP3 1645 A 1 
HETATM 43 N N7B GP3 . . . B 2 65.294 12.671 219.836 1 179.8 ? N7B GP3 1645 A 1 
HETATM 44 C C5B GP3 . . . B 2 64.395 13.19 218.996 1 179.92 ? C5B GP3 1645 A 1 
HETATM 45 C C6B GP3 . . . B 2 63.873 12.769 217.773 1 179.78 ? C6B GP3 1645 A 1 
HETATM 46 O O6B GP3 . . . B 2 64.256 11.71 217.273 1 179.7 ? O6B GP3 1645 A 1 
HETATM 47 N N1B GP3 . . . B 2 62.908 13.574 217.125 1 179.66 ? N1B GP3 1645 A 1 
HETATM 48 C C2B GP3 . . . B 2 62.501 14.781 217.732 1 179.66 ? C2B GP3 1645 A 1 
HETATM 49 N N2B GP3 . . . B 2 61.597 15.571 217.164 1 179.58 ? N2B GP3 1645 A 1 
HETATM 50 N N3B GP3 . . . B 2 63.033 15.15 218.909 1 179.85 ? N3B GP3 1645 A 1 
HETATM 51 C C4B GP3 . . . B 2 63.956 14.392 219.545 1 180.1 ? C4B GP3 1645 A 1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           51 
#