data_2JHM # _model_server_result.job_id M50KwBNm2oP0D8Qe-Txe3w _model_server_result.datetime_utc '2024-10-14 08:24:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2jhm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1299}' # _entry.id 2JHM # _exptl.entry_id 2JHM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 238.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2JHM _cell.length_a 73.709 _cell.length_b 73.709 _cell.length_c 124.605 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JHM _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 F CYS 82 1_555 A SG CYS 31 F CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf2 A SG CYS 10 F CYS 89 1_555 A SG CYS 38 F CYS 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf3 A SG CYS 162 F CYS 241 1_555 A SG CYS 175 F CYS 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc1 A OD1 ASP 154 F ASP 233 1_555 B CA CA . F CA 1298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.593 ? metalc ? metalc2 A OD2 ASP 154 F ASP 233 1_555 B CA CA . F CA 1298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc3 A OD1 ASP 156 F ASP 235 1_555 B CA CA . F CA 1298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc4 A O SER 158 F SER 237 1_555 B CA CA . F CA 1298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc5 A O SER 160 F SER 239 1_555 B CA CA . F CA 1298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc6 B CA CA . F CA 1298 1_555 E O HOH . F HOH 2106 2_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc7 B CA CA . F CA 1298 1_555 E O HOH . F HOH 2107 2_445 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? # _chem_comp.formula 'C8 H18 N2 O4 S' _chem_comp.formula_weight 238.305 _chem_comp.id EPE _chem_comp.mon_nstd_flag . _chem_comp.name '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms HEPES # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 EPE sing 83 n n N1 C6 EPE sing 84 n n N1 C9 EPE sing 85 n n C2 C3 EPE sing 86 n n C2 H21 EPE sing 87 n n C2 H22 EPE sing 88 n n C3 N4 EPE sing 89 n n C3 H31 EPE sing 90 n n C3 H32 EPE sing 91 n n N4 C5 EPE sing 92 n n N4 C7 EPE sing 93 n n C5 C6 EPE sing 94 n n C5 H51 EPE sing 95 n n C5 H52 EPE sing 96 n n C6 H61 EPE sing 97 n n C6 H62 EPE sing 98 n n C7 C8 EPE sing 99 n n C7 H71 EPE sing 100 n n C7 H72 EPE sing 101 n n C8 O8 EPE sing 102 n n C8 H81 EPE sing 103 n n C8 H82 EPE sing 104 n n O8 HO8 EPE sing 105 n n C9 C10 EPE sing 106 n n C9 H91 EPE sing 107 n n C9 H92 EPE sing 108 n n C10 S EPE sing 109 n n C10 H101 EPE sing 110 n n C10 H102 EPE sing 111 n n S O1S EPE doub 112 n n S O2S EPE doub 113 n n S O3S EPE sing 114 n n O3S HOS3 EPE sing 115 n n # _atom_sites.entry_id 2JHM _atom_sites.fract_transf_matrix[1][1] 0.013567 _atom_sites.fract_transf_matrix[1][2] 0.007833 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015666 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008025 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA F 1 1298 1298 CA CA . C 3 EPE F 1 1299 1299 EPE EPE . D 4 IPA F 1 1300 1300 IPA IPA . E 5 HOH F 1 2001 2001 HOH HOH . E 5 HOH F 2 2002 2002 HOH HOH . E 5 HOH F 3 2003 2003 HOH HOH . E 5 HOH F 4 2004 2004 HOH HOH . E 5 HOH F 5 2005 2005 HOH HOH . E 5 HOH F 6 2006 2006 HOH HOH . E 5 HOH F 7 2007 2007 HOH HOH . E 5 HOH F 8 2008 2008 HOH HOH . E 5 HOH F 9 2009 2009 HOH HOH . E 5 HOH F 10 2010 2010 HOH HOH . E 5 HOH F 11 2011 2011 HOH HOH . E 5 HOH F 12 2012 2012 HOH HOH . E 5 HOH F 13 2013 2013 HOH HOH . E 5 HOH F 14 2014 2014 HOH HOH . E 5 HOH F 15 2015 2015 HOH HOH . E 5 HOH F 16 2016 2016 HOH HOH . E 5 HOH F 17 2017 2017 HOH HOH . E 5 HOH F 18 2018 2018 HOH HOH . E 5 HOH F 19 2019 2019 HOH HOH . E 5 HOH F 20 2020 2020 HOH HOH . E 5 HOH F 21 2021 2021 HOH HOH . E 5 HOH F 22 2022 2022 HOH HOH . E 5 HOH F 23 2023 2023 HOH HOH . E 5 HOH F 24 2024 2024 HOH HOH . E 5 HOH F 25 2025 2025 HOH HOH . E 5 HOH F 26 2026 2026 HOH HOH . E 5 HOH F 27 2027 2027 HOH HOH . E 5 HOH F 28 2028 2028 HOH HOH . E 5 HOH F 29 2029 2029 HOH HOH . E 5 HOH F 30 2030 2030 HOH HOH . E 5 HOH F 31 2031 2031 HOH HOH . E 5 HOH F 32 2032 2032 HOH HOH . E 5 HOH F 33 2033 2033 HOH HOH . E 5 HOH F 34 2034 2034 HOH HOH . E 5 HOH F 35 2035 2035 HOH HOH . E 5 HOH F 36 2036 2036 HOH HOH . E 5 HOH F 37 2037 2037 HOH HOH . E 5 HOH F 38 2038 2038 HOH HOH . E 5 HOH F 39 2039 2039 HOH HOH . E 5 HOH F 40 2040 2040 HOH HOH . E 5 HOH F 41 2041 2041 HOH HOH . E 5 HOH F 42 2042 2042 HOH HOH . E 5 HOH F 43 2043 2043 HOH HOH . E 5 HOH F 44 2044 2044 HOH HOH . E 5 HOH F 45 2045 2045 HOH HOH . E 5 HOH F 46 2046 2046 HOH HOH . E 5 HOH F 47 2047 2047 HOH HOH . E 5 HOH F 48 2048 2048 HOH HOH . E 5 HOH F 49 2049 2049 HOH HOH . E 5 HOH F 50 2050 2050 HOH HOH . E 5 HOH F 51 2051 2051 HOH HOH . E 5 HOH F 52 2052 2052 HOH HOH . E 5 HOH F 53 2053 2053 HOH HOH . E 5 HOH F 54 2054 2054 HOH HOH . E 5 HOH F 55 2055 2055 HOH HOH . E 5 HOH F 56 2056 2056 HOH HOH . E 5 HOH F 57 2057 2057 HOH HOH . E 5 HOH F 58 2058 2058 HOH HOH . E 5 HOH F 59 2059 2059 HOH HOH . E 5 HOH F 60 2060 2060 HOH HOH . E 5 HOH F 61 2061 2061 HOH HOH . E 5 HOH F 62 2062 2062 HOH HOH . E 5 HOH F 63 2063 2063 HOH HOH . E 5 HOH F 64 2064 2064 HOH HOH . E 5 HOH F 65 2065 2065 HOH HOH . E 5 HOH F 66 2066 2066 HOH HOH . E 5 HOH F 67 2067 2067 HOH HOH . E 5 HOH F 68 2068 2068 HOH HOH . E 5 HOH F 69 2069 2069 HOH HOH . E 5 HOH F 70 2070 2070 HOH HOH . E 5 HOH F 71 2071 2071 HOH HOH . E 5 HOH F 72 2072 2072 HOH HOH . E 5 HOH F 73 2073 2073 HOH HOH . E 5 HOH F 74 2074 2074 HOH HOH . E 5 HOH F 75 2075 2075 HOH HOH . E 5 HOH F 76 2076 2076 HOH HOH . E 5 HOH F 77 2077 2077 HOH HOH . E 5 HOH F 78 2078 2078 HOH HOH . E 5 HOH F 79 2079 2079 HOH HOH . E 5 HOH F 80 2080 2080 HOH HOH . E 5 HOH F 81 2081 2081 HOH HOH . E 5 HOH F 82 2082 2082 HOH HOH . E 5 HOH F 83 2083 2083 HOH HOH . E 5 HOH F 84 2084 2084 HOH HOH . E 5 HOH F 85 2085 2085 HOH HOH . E 5 HOH F 86 2086 2086 HOH HOH . E 5 HOH F 87 2087 2087 HOH HOH . E 5 HOH F 88 2088 2088 HOH HOH . E 5 HOH F 89 2089 2089 HOH HOH . E 5 HOH F 90 2090 2090 HOH HOH . E 5 HOH F 91 2091 2091 HOH HOH . E 5 HOH F 92 2092 2092 HOH HOH . E 5 HOH F 93 2093 2093 HOH HOH . E 5 HOH F 94 2094 2094 HOH HOH . E 5 HOH F 95 2095 2095 HOH HOH . E 5 HOH F 96 2096 2096 HOH HOH . E 5 HOH F 97 2097 2097 HOH HOH . E 5 HOH F 98 2098 2098 HOH HOH . E 5 HOH F 99 2099 2099 HOH HOH . E 5 HOH F 100 2100 2100 HOH HOH . E 5 HOH F 101 2101 2101 HOH HOH . E 5 HOH F 102 2102 2102 HOH HOH . E 5 HOH F 103 2103 2103 HOH HOH . E 5 HOH F 104 2104 2104 HOH HOH . E 5 HOH F 105 2105 2105 HOH HOH . E 5 HOH F 106 2106 2106 HOH HOH . E 5 HOH F 107 2107 2107 HOH HOH . E 5 HOH F 108 2108 2108 HOH HOH . E 5 HOH F 109 2109 2109 HOH HOH . E 5 HOH F 110 2110 2110 HOH HOH . E 5 HOH F 111 2111 2111 HOH HOH . E 5 HOH F 112 2112 2112 HOH HOH . E 5 HOH F 113 2113 2113 HOH HOH . E 5 HOH F 114 2114 2114 HOH HOH . E 5 HOH F 115 2115 2115 HOH HOH . E 5 HOH F 116 2116 2116 HOH HOH . E 5 HOH F 117 2117 2117 HOH HOH . E 5 HOH F 118 2118 2118 HOH HOH . E 5 HOH F 119 2119 2119 HOH HOH . E 5 HOH F 120 2120 2120 HOH HOH . E 5 HOH F 121 2121 2121 HOH HOH . E 5 HOH F 122 2122 2122 HOH HOH . E 5 HOH F 123 2123 2123 HOH HOH . E 5 HOH F 124 2124 2124 HOH HOH . E 5 HOH F 125 2125 2125 HOH HOH . E 5 HOH F 126 2126 2126 HOH HOH . E 5 HOH F 127 2127 2127 HOH HOH . E 5 HOH F 128 2128 2128 HOH HOH . E 5 HOH F 129 2129 2129 HOH HOH . E 5 HOH F 130 2130 2130 HOH HOH . E 5 HOH F 131 2131 2131 HOH HOH . E 5 HOH F 132 2132 2132 HOH HOH . E 5 HOH F 133 2133 2133 HOH HOH . E 5 HOH F 134 2134 2134 HOH HOH . E 5 HOH F 135 2135 2135 HOH HOH . E 5 HOH F 136 2136 2136 HOH HOH . E 5 HOH F 137 2137 2137 HOH HOH . E 5 HOH F 138 2138 2138 HOH HOH . E 5 HOH F 139 2139 2139 HOH HOH . E 5 HOH F 140 2140 2140 HOH HOH . E 5 HOH F 141 2141 2141 HOH HOH . E 5 HOH F 142 2142 2142 HOH HOH . E 5 HOH F 143 2143 2143 HOH HOH . E 5 HOH F 144 2144 2144 HOH HOH . E 5 HOH F 145 2145 2145 HOH HOH . E 5 HOH F 146 2146 2146 HOH HOH . E 5 HOH F 147 2147 2147 HOH HOH . E 5 HOH F 148 2148 2148 HOH HOH . E 5 HOH F 149 2149 2149 HOH HOH . E 5 HOH F 150 2150 2150 HOH HOH . E 5 HOH F 151 2151 2151 HOH HOH . E 5 HOH F 152 2152 2152 HOH HOH . E 5 HOH F 153 2153 2153 HOH HOH . E 5 HOH F 154 2154 2154 HOH HOH . E 5 HOH F 155 2155 2155 HOH HOH . E 5 HOH F 156 2156 2156 HOH HOH . E 5 HOH F 157 2157 2157 HOH HOH . E 5 HOH F 158 2158 2158 HOH HOH . E 5 HOH F 159 2159 2159 HOH HOH . E 5 HOH F 160 2160 2160 HOH HOH . E 5 HOH F 161 2161 2161 HOH HOH . E 5 HOH F 162 2162 2162 HOH HOH . E 5 HOH F 163 2163 2163 HOH HOH . E 5 HOH F 164 2164 2164 HOH HOH . E 5 HOH F 165 2165 2165 HOH HOH . E 5 HOH F 166 2166 2166 HOH HOH . E 5 HOH F 167 2167 2167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 EPE . . . C 3 5.917 -8.26 17.907 0.5 20 ? C10 EPE 1299 F 1 HETATM 2 S S EPE . . . C 3 4.963 -9.39 16.917 0.5 20 ? S EPE 1299 F 1 HETATM 3 O O1S EPE . . . C 3 4.986 -8.787 15.61 0.5 20 ? O1S EPE 1299 F 1 HETATM 4 O O2S EPE . . . C 3 3.62 -9.469 17.48 0.5 20 ? O2S EPE 1299 F 1 HETATM 5 O O3S EPE . . . C 3 5.567 -10.706 17 1 20 ? O3S EPE 1299 F 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 455 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #