data_2JK6
#
_model_server_result.job_id            3kjX4EHPERC6_sZCIV9WGQ 
_model_server_result.datetime_utc      '2024-11-30 06:48:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2jk6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1490}' 
#
_entry.id    2JK6 
#
_exptl.entry_id    2JK6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              785.55 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN-ADENINE DINUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2JK6 
_cell.length_a            103.451 
_cell.length_b            103.451 
_cell.length_c            192.621 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2JK6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41' 
#
_pdbx_struct_assembly.method_details        PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 72 A CYS 52 1_555 A SG CYS 77 A CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf2 B SG CYS 72 B CYS 52 1_555 B SG CYS 77 B CYS 57 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
#
_chem_comp.formula           'C27 H33 N9 O15 P2' 
_chem_comp.formula_weight    785.55 
_chem_comp.id                FAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN-ADENINE DINUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A FAD doub 83 n n 
PA O2A FAD sing 84 n n 
PA O5B FAD sing 85 n n 
PA O3P FAD sing 86 n n 
O2A HOA2 FAD sing 87 n n 
O5B C5B FAD sing 88 n n 
C5B C4B FAD sing 89 n n 
C5B H51A FAD sing 90 n n 
C5B H52A FAD sing 91 n n 
C4B O4B FAD sing 92 n n 
C4B C3B FAD sing 93 n n 
C4B H4B FAD sing 94 n n 
O4B C1B FAD sing 95 n n 
C3B O3B FAD sing 96 n n 
C3B C2B FAD sing 97 n n 
C3B H3B FAD sing 98 n n 
O3B HO3A FAD sing 99 n n 
C2B O2B FAD sing 100 n n 
C2B C1B FAD sing 101 n n 
C2B H2B FAD sing 102 n n 
O2B HO2A FAD sing 103 n n 
C1B N9A FAD sing 104 n n 
C1B H1B FAD sing 105 n n 
N9A C8A FAD sing 106 n y 
N9A C4A FAD sing 107 n y 
C8A N7A FAD doub 108 n y 
C8A H8A FAD sing 109 n n 
N7A C5A FAD sing 110 n y 
C5A C6A FAD sing 111 n y 
C5A C4A FAD doub 112 n y 
C6A N6A FAD sing 113 n n 
C6A N1A FAD doub 114 n y 
N6A H61A FAD sing 115 n n 
N6A H62A FAD sing 116 n n 
N1A C2A FAD sing 117 n y 
C2A N3A FAD doub 118 n y 
C2A H2A FAD sing 119 n n 
N3A C4A FAD sing 120 n y 
N1 C2 FAD sing 121 n n 
N1 C10 FAD doub 122 n n 
C2 O2 FAD doub 123 n n 
C2 N3 FAD sing 124 n n 
N3 C4 FAD sing 125 n n 
N3 HN3 FAD sing 126 n n 
C4 O4 FAD doub 127 n n 
C4 C4X FAD sing 128 n n 
C4X N5 FAD doub 129 n n 
C4X C10 FAD sing 130 n n 
N5 C5X FAD sing 131 n n 
C5X C6 FAD doub 132 n y 
C5X C9A FAD sing 133 n y 
C6 C7 FAD sing 134 n y 
C6 H6 FAD sing 135 n n 
C7 C7M FAD sing 136 n n 
C7 C8 FAD doub 137 n y 
C7M HM71 FAD sing 138 n n 
C7M HM72 FAD sing 139 n n 
C7M HM73 FAD sing 140 n n 
C8 C8M FAD sing 141 n n 
C8 C9 FAD sing 142 n y 
C8M HM81 FAD sing 143 n n 
C8M HM82 FAD sing 144 n n 
C8M HM83 FAD sing 145 n n 
C9 C9A FAD doub 146 n y 
C9 H9 FAD sing 147 n n 
C9A N10 FAD sing 148 n n 
N10 C10 FAD sing 149 n n 
N10 C1' FAD sing 150 n n 
C1' C2' FAD sing 151 n n 
C1' "H1'1" FAD sing 152 n n 
C1' "H1'2" FAD sing 153 n n 
C2' O2' FAD sing 154 n n 
C2' C3' FAD sing 155 n n 
C2' H2' FAD sing 156 n n 
O2' HO2' FAD sing 157 n n 
C3' O3' FAD sing 158 n n 
C3' C4' FAD sing 159 n n 
C3' H3' FAD sing 160 n n 
O3' HO3' FAD sing 161 n n 
C4' O4' FAD sing 162 n n 
C4' C5' FAD sing 163 n n 
C4' H4' FAD sing 164 n n 
O4' HO4' FAD sing 165 n n 
C5' O5' FAD sing 166 n n 
C5' "H5'1" FAD sing 167 n n 
C5' "H5'2" FAD sing 168 n n 
O5' P FAD sing 169 n n 
P O1P FAD doub 170 n n 
P O2P FAD sing 171 n n 
P O3P FAD sing 172 n n 
O2P HOP2 FAD sing 173 n n 
#
_atom_sites.entry_id                     2JK6 
_atom_sites.fract_transf_matrix[1][1]    0.009666 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009666 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005192 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FAD A 1 1490 1490 FAD FAD . 
D 3 SO4 A 1 1491 1491 SO4 SO4 . 
E 3 SO4 A 1 1492 1492 SO4 SO4 . 
F 3 SO4 A 1 1493 1493 SO4 SO4 . 
G 2 FAD B 1 1490 1490 FAD FAD . 
H 3 SO4 B 1 1491 1491 SO4 SO4 . 
I 3 SO4 B 1 1492 1492 SO4 SO4 . 
J 4 HOH A 1 2001 2001 HOH HOH . 
J 4 HOH A 2 2002 2002 HOH HOH . 
J 4 HOH A 3 2003 2003 HOH HOH . 
J 4 HOH A 4 2004 2004 HOH HOH . 
J 4 HOH A 5 2005 2005 HOH HOH . 
J 4 HOH A 6 2006 2006 HOH HOH . 
J 4 HOH A 7 2007 2007 HOH HOH . 
J 4 HOH A 8 2008 2008 HOH HOH . 
J 4 HOH A 9 2009 2009 HOH HOH . 
J 4 HOH A 10 2010 2010 HOH HOH . 
J 4 HOH A 11 2011 2011 HOH HOH . 
J 4 HOH A 12 2012 2012 HOH HOH . 
J 4 HOH A 13 2013 2013 HOH HOH . 
K 4 HOH B 1 2001 2001 HOH HOH . 
K 4 HOH B 2 2002 2002 HOH HOH . 
K 4 HOH B 3 2003 2003 HOH HOH . 
K 4 HOH B 4 2004 2004 HOH HOH . 
K 4 HOH B 5 2005 2005 HOH HOH . 
K 4 HOH B 6 2006 2006 HOH HOH . 
K 4 HOH B 7 2007 2007 HOH HOH . 
K 4 HOH B 8 2008 2008 HOH HOH . 
K 4 HOH B 9 2009 2009 HOH HOH . 
K 4 HOH B 10 2010 2010 HOH HOH . 
K 4 HOH B 11 2011 2011 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA FAD . . . C 2 31.706 56.415 -7.876 1 43.3 ? PA FAD 1490 A 1 
HETATM 2 O O1A FAD . . . C 2 32.743 55.861 -6.934 1 42.77 ? O1A FAD 1490 A 1 
HETATM 3 O O2A FAD . . . C 2 30.724 55.363 -8.348 1 42.74 ? O2A FAD 1490 A 1 
HETATM 4 O O5B FAD . . . C 2 32.434 57.106 -9.125 1 43.79 ? O5B FAD 1490 A 1 
HETATM 5 C C5B FAD . . . C 2 33.54 57.945 -8.921 1 44.63 ? C5B FAD 1490 A 1 
HETATM 6 C C4B FAD . . . C 2 34.427 57.862 -10.147 1 45.25 ? C4B FAD 1490 A 1 
HETATM 7 O O4B FAD . . . C 2 35.047 59.113 -10.362 1 45.54 ? O4B FAD 1490 A 1 
HETATM 8 C C3B FAD . . . C 2 35.528 56.829 -9.957 1 45.51 ? C3B FAD 1490 A 1 
HETATM 9 O O3B FAD . . . C 2 35.422 55.843 -10.958 1 45.59 ? O3B FAD 1490 A 1 
HETATM 10 C C2B FAD . . . C 2 36.828 57.601 -10.093 1 45.83 ? C2B FAD 1490 A 1 
HETATM 11 O O2B FAD . . . C 2 37.756 56.927 -10.913 1 45.86 ? O2B FAD 1490 A 1 
HETATM 12 C C1B FAD . . . C 2 36.39 58.9 -10.748 1 46.06 ? C1B FAD 1490 A 1 
HETATM 13 N N9A FAD . . . C 2 37.231 60.053 -10.38 1 46.03 ? N9A FAD 1490 A 1 
HETATM 14 C C8A FAD . . . C 2 37.729 60.374 -9.145 1 46.13 ? C8A FAD 1490 A 1 
HETATM 15 N N7A FAD . . . C 2 38.443 61.517 -9.26 1 46.25 ? N7A FAD 1490 A 1 
HETATM 16 C C5A FAD . . . C 2 38.407 61.929 -10.547 1 46.19 ? C5A FAD 1490 A 1 
HETATM 17 C C6A FAD . . . C 2 38.959 63.025 -11.206 1 45.99 ? C6A FAD 1490 A 1 
HETATM 18 N N6A FAD . . . C 2 39.51 64.015 -10.515 1 46.11 ? N6A FAD 1490 A 1 
HETATM 19 N N1A FAD . . . C 2 38.737 63.184 -12.557 1 46.06 ? N1A FAD 1490 A 1 
HETATM 20 C C2A FAD . . . C 2 37.975 62.263 -13.257 1 46.27 ? C2A FAD 1490 A 1 
HETATM 21 N N3A FAD . . . C 2 37.431 61.178 -12.597 1 46.29 ? N3A FAD 1490 A 1 
HETATM 22 C C4A FAD . . . C 2 37.644 61.015 -11.264 1 46.18 ? C4A FAD 1490 A 1 
HETATM 23 N N1 FAD . . . C 2 26.841 50.89 -2.203 1 43.57 ? N1 FAD 1490 A 1 
HETATM 24 C C2 FAD . . . C 2 25.648 50.184 -2.207 1 43.54 ? C2 FAD 1490 A 1 
HETATM 25 O O2 FAD . . . C 2 24.593 50.726 -2.541 1 43.52 ? O2 FAD 1490 A 1 
HETATM 26 N N3 FAD . . . C 2 25.637 48.857 -1.834 1 43.47 ? N3 FAD 1490 A 1 
HETATM 27 C C4 FAD . . . C 2 26.808 48.235 -1.456 1 43.52 ? C4 FAD 1490 A 1 
HETATM 28 O O4 FAD . . . C 2 26.774 47.053 -1.129 1 43.69 ? O4 FAD 1490 A 1 
HETATM 29 C C4X FAD . . . C 2 28.013 48.938 -1.45 1 43.56 ? C4X FAD 1490 A 1 
HETATM 30 N N5 FAD . . . C 2 29.188 48.311 -1.077 1 43.57 ? N5 FAD 1490 A 1 
HETATM 31 C C5X FAD . . . C 2 30.385 48.998 -1.071 1 43.49 ? C5X FAD 1490 A 1 
HETATM 32 C C6 FAD . . . C 2 31.559 48.345 -0.691 1 43.56 ? C6 FAD 1490 A 1 
HETATM 33 C C7 FAD . . . C 2 32.777 49.026 -0.681 1 43.54 ? C7 FAD 1490 A 1 
HETATM 34 C C7M FAD . . . C 2 34.028 48.306 -0.264 1 43.48 ? C7M FAD 1490 A 1 
HETATM 35 C C8 FAD . . . C 2 32.815 50.371 -1.056 1 43.59 ? C8 FAD 1490 A 1 
HETATM 36 C C8M FAD . . . C 2 34.108 51.135 -1.054 1 43.55 ? C8M FAD 1490 A 1 
HETATM 37 C C9 FAD . . . C 2 31.638 51.018 -1.436 1 43.6 ? C9 FAD 1490 A 1 
HETATM 38 C C9A FAD . . . C 2 30.414 50.34 -1.447 1 43.53 ? C9A FAD 1490 A 1 
HETATM 39 N N10 FAD . . . C 2 29.234 50.978 -1.822 1 43.52 ? N10 FAD 1490 A 1 
HETATM 40 C C10 FAD . . . C 2 28.031 50.279 -1.826 1 43.54 ? C10 FAD 1490 A 1 
HETATM 41 C C1' FAD . . . C 2 29.223 52.471 -1.995 1 43.51 ? C1' FAD 1490 A 1 
HETATM 42 C C2' FAD . . . C 2 29.177 52.818 -3.479 1 43.66 ? C2' FAD 1490 A 1 
HETATM 43 O O2' FAD . . . C 2 30.249 52.184 -4.138 1 44.89 ? O2' FAD 1490 A 1 
HETATM 44 C C3' FAD . . . C 2 29.274 54.319 -3.697 1 43.44 ? C3' FAD 1490 A 1 
HETATM 45 O O3' FAD . . . C 2 28.372 54.954 -2.82 1 43.62 ? O3' FAD 1490 A 1 
HETATM 46 C C4' FAD . . . C 2 28.938 54.713 -5.133 1 43.49 ? C4' FAD 1490 A 1 
HETATM 47 O O4' FAD . . . C 2 29.84 54.113 -6.038 1 43.33 ? O4' FAD 1490 A 1 
HETATM 48 C C5' FAD . . . C 2 28.998 56.225 -5.294 1 43.41 ? C5' FAD 1490 A 1 
HETATM 49 O O5' FAD . . . C 2 28.71 56.59 -6.622 1 43.66 ? O5' FAD 1490 A 1 
HETATM 50 P P FAD . . . C 2 29.391 57.906 -7.244 1 43.7 ? P FAD 1490 A 1 
HETATM 51 O O1P FAD . . . C 2 28.986 58.055 -8.697 1 43.7 ? O1P FAD 1490 A 1 
HETATM 52 O O2P FAD . . . C 2 29.045 59.122 -6.418 1 43.63 ? O2P FAD 1490 A 1 
HETATM 53 O O3P FAD . . . C 2 30.978 57.646 -7.139 1 43.59 ? O3P FAD 1490 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           300 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           53 
#