data_2JTI # _model_server_result.job_id bmLyZk2LzQSrjkjzKFnWLg _model_server_result.datetime_utc '2025-03-05 18:46:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2jti # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":104}' # _entry.id 2JTI # _exptl.entry_id 2JTI _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 618.503 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEME C' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2JTI _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JTI _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B SG CYS 19 B CYS 14 1_555 D CAB HEC . B HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? covale ? covale2 B SG CYS 22 B CYS 17 1_555 D CAC HEC . B HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? metalc ? metalc1 A NE2 HIS 175 A HIS 175 1_555 C FE HEM . A HEM 295 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.926 ? metalc ? metalc2 B NE2 HIS 23 B HIS 18 1_555 D FE HEC . B HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc3 B SD MET 85 B MET 80 1_555 D FE HEC . B HEC 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.234 ? # _chem_comp.formula 'C34 H34 Fe N4 O4' _chem_comp.formula_weight 618.503 _chem_comp.id HEC _chem_comp.mon_nstd_flag . _chem_comp.name 'HEME C' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE NA HEC sing 129 n n FE NB HEC sing 130 n n FE NC HEC sing 131 n n FE ND HEC sing 132 n n CHA C1A HEC doub 133 n n CHA C4D HEC sing 134 n n CHA HHA HEC sing 135 n n CHB C4A HEC doub 136 n n CHB C1B HEC sing 137 n n CHB HHB HEC sing 138 n n CHC C4B HEC doub 139 n n CHC C1C HEC sing 140 n n CHC HHC HEC sing 141 n n CHD C4C HEC doub 142 n n CHD C1D HEC sing 143 n n CHD HHD HEC sing 144 n n NA C1A HEC sing 145 n y NA C4A HEC sing 146 n y C1A C2A HEC sing 147 n y C2A C3A HEC doub 148 n y C2A CAA HEC sing 149 n n C3A C4A HEC sing 150 n y C3A CMA HEC sing 151 n n CMA HMA1 HEC sing 152 n n CMA HMA2 HEC sing 153 n n CMA HMA3 HEC sing 154 n n CAA CBA HEC sing 155 n n CAA HAA1 HEC sing 156 n n CAA HAA2 HEC sing 157 n n CBA CGA HEC sing 158 n n CBA HBA1 HEC sing 159 n n CBA HBA2 HEC sing 160 n n CGA O1A HEC doub 161 n n CGA O2A HEC sing 162 n n O2A H2A HEC sing 163 n n NB C1B HEC sing 164 n y NB C4B HEC sing 165 n y C1B C2B HEC doub 166 n y C2B C3B HEC sing 167 n y C2B CMB HEC sing 168 n n C3B C4B HEC sing 169 n y C3B CAB HEC doub 170 e n CMB HMB1 HEC sing 171 n n CMB HMB2 HEC sing 172 n n CMB HMB3 HEC sing 173 n n CAB CBB HEC sing 174 n n CAB HAB HEC sing 175 n n CBB HBB1 HEC sing 176 n n CBB HBB2 HEC sing 177 n n CBB HBB3 HEC sing 178 n n NC C1C HEC sing 179 n y NC C4C HEC sing 180 n y C1C C2C HEC doub 181 n y C2C C3C HEC sing 182 n y C2C CMC HEC sing 183 n n C3C C4C HEC sing 184 n y C3C CAC HEC doub 185 e n CMC HMC1 HEC sing 186 n n CMC HMC2 HEC sing 187 n n CMC HMC3 HEC sing 188 n n CAC CBC HEC sing 189 n n CAC HAC HEC sing 190 n n CBC HBC1 HEC sing 191 n n CBC HBC2 HEC sing 192 n n CBC HBC3 HEC sing 193 n n ND C1D HEC sing 194 n y ND C4D HEC sing 195 n y C1D C2D HEC doub 196 n y C2D C3D HEC sing 197 n y C2D CMD HEC sing 198 n n C3D C4D HEC doub 199 n y C3D CAD HEC sing 200 n n CMD HMD1 HEC sing 201 n n CMD HMD2 HEC sing 202 n n CMD HMD3 HEC sing 203 n n CAD CBD HEC sing 204 n n CAD HAD1 HEC sing 205 n n CAD HAD2 HEC sing 206 n n CBD CGD HEC sing 207 n n CBD HBD1 HEC sing 208 n n CBD HBD2 HEC sing 209 n n CGD O1D HEC doub 210 n n CGD O2D HEC sing 211 n n O2D H2D HEC sing 212 n n # _atom_sites.entry_id 2JTI _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HEM A 1 295 295 HEM HEM . D 4 HEC B 1 104 104 HEC HEC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE HEC . . . D 4 13.789 15.579 29.126 1 25.96 ? FE HEC 104 B 1 HETATM 2 C CHA HEC . . . D 4 14.828 12.401 28.24 1 31.5 ? CHA HEC 104 B 1 HETATM 3 C CHB HEC . . . D 4 16.225 15.806 31.404 1 31.85 ? CHB HEC 104 B 1 HETATM 4 C CHC HEC . . . D 4 12.945 18.862 29.602 1 30.51 ? CHC HEC 104 B 1 HETATM 5 C CHD HEC . . . D 4 10.757 15.012 27.636 1 30.63 ? CHD HEC 104 B 1 HETATM 6 N NA HEC . . . D 4 15.275 14.338 29.701 1 30.48 ? NA HEC 104 B 1 HETATM 7 C C1A HEC . . . D 4 15.589 13.096 29.162 1 30.36 ? C1A HEC 104 B 1 HETATM 8 C C2A HEC . . . D 4 16.838 12.672 29.718 1 33.22 ? C2A HEC 104 B 1 HETATM 9 C C3A HEC . . . D 4 17.257 13.598 30.595 1 33.32 ? C3A HEC 104 B 1 HETATM 10 C C4A HEC . . . D 4 16.26 14.637 30.628 1 30.96 ? C4A HEC 104 B 1 HETATM 11 C CMA HEC . . . D 4 18.573 13.602 31.405 1 32.16 ? CMA HEC 104 B 1 HETATM 12 C CAA HEC . . . D 4 17.463 11.263 29.402 1 31.48 ? CAA HEC 104 B 1 HETATM 13 C CBA HEC . . . D 4 16.778 10.206 30.343 1 31.28 ? CBA HEC 104 B 1 HETATM 14 C CGA HEC . . . D 4 17.526 8.89 30.32 1 33.27 ? CGA HEC 104 B 1 HETATM 15 O O1A HEC . . . D 4 17.093 7.979 31.078 1 35.01 ? O1A HEC 104 B 1 HETATM 16 O O2A HEC . . . D 4 18.444 8.84 29.463 1 30.92 ? O2A HEC 104 B 1 HETATM 17 N NB HEC . . . D 4 14.404 17.036 30.325 1 28.05 ? NB HEC 104 B 1 HETATM 18 C C1B HEC . . . D 4 15.503 16.978 31.171 1 29.43 ? C1B HEC 104 B 1 HETATM 19 C C2B HEC . . . D 4 15.757 18.294 31.71 1 29.37 ? C2B HEC 104 B 1 HETATM 20 C C3B HEC . . . D 4 14.845 19.144 31.189 1 27.68 ? C3B HEC 104 B 1 HETATM 21 C C4B HEC . . . D 4 14.011 18.365 30.297 1 28.11 ? C4B HEC 104 B 1 HETATM 22 C CMB HEC . . . D 4 16.844 18.534 32.749 1 27.21 ? CMB HEC 104 B 1 HETATM 23 C CAB HEC . . . D 4 14.712 20.765 31.267 1 28.86 ? CAB HEC 104 B 1 HETATM 24 C CBB HEC . . . D 4 15.657 21.348 31.316 1 28.41 ? CBB HEC 104 B 1 HETATM 25 N NC HEC . . . D 4 12.119 16.721 28.761 1 31.31 ? NC HEC 104 B 1 HETATM 26 C C1C HEC . . . D 4 12.017 18.072 28.949 1 31.13 ? C1C HEC 104 B 1 HETATM 27 C C2C HEC . . . D 4 10.827 18.556 28.27 1 32.51 ? C2C HEC 104 B 1 HETATM 28 C C3C HEC . . . D 4 10.235 17.509 27.704 1 31.78 ? C3C HEC 104 B 1 HETATM 29 C C4C HEC . . . D 4 11.024 16.334 28.029 1 30.93 ? C4C HEC 104 B 1 HETATM 30 C CMC HEC . . . D 4 10.398 20.058 28.35 1 34.92 ? CMC HEC 104 B 1 HETATM 31 C CAC HEC . . . D 4 8.977 17.404 26.627 1 30.02 ? CAC HEC 104 B 1 HETATM 32 C CBC HEC . . . D 4 8.636 18.354 26.072 1 29.47 ? CBC HEC 104 B 1 HETATM 33 N ND HEC . . . D 4 12.919 14.009 28.195 1 30.8 ? ND HEC 104 B 1 HETATM 34 C C1D HEC . . . D 4 11.695 14.019 27.53 1 30.61 ? C1D HEC 104 B 1 HETATM 35 C C2D HEC . . . D 4 11.585 12.823 26.728 1 32.98 ? C2D HEC 104 B 1 HETATM 36 C C3D HEC . . . D 4 12.694 12.07 26.985 1 31.46 ? C3D HEC 104 B 1 HETATM 37 C C4D HEC . . . D 4 13.558 12.816 27.833 1 31.38 ? C4D HEC 104 B 1 HETATM 38 C CMD HEC . . . D 4 10.364 12.469 25.859 1 31.94 ? CMD HEC 104 B 1 HETATM 39 C CAD HEC . . . D 4 13.085 10.718 26.307 1 29.17 ? CAD HEC 104 B 1 HETATM 40 C CBD HEC . . . D 4 13.602 11.031 24.891 1 27.54 ? CBD HEC 104 B 1 HETATM 41 C CGD HEC . . . D 4 13.879 9.823 24.049 1 27.25 ? CGD HEC 104 B 1 HETATM 42 O O1D HEC . . . D 4 13.456 8.743 24.472 1 24.44 ? O1D HEC 104 B 1 HETATM 43 O O2D HEC . . . D 4 14.512 10.142 23.017 1 29.33 ? O2D HEC 104 B 1 HETATM 44 H HHA HEC . . . D 4 15.233 11.493 27.819 1 0 ? HHA HEC 104 B 1 HETATM 45 H HHB HEC . . . D 4 16.83 15.795 32.299 1 0 ? HHB HEC 104 B 1 HETATM 46 H HHC HEC . . . D 4 12.82 19.936 29.559 1 0 ? HHC HEC 104 B 1 HETATM 47 H HHD HEC . . . D 4 9.732 14.755 27.411 1 0 ? HHD HEC 104 B 1 HETATM 48 H HMA1 HEC . . . D 4 18.946 14.604 31.369 1 0 ? HMA1 HEC 104 B 1 HETATM 49 H HMA2 HEC . . . D 4 18.392 13.306 32.438 1 0 ? HMA2 HEC 104 B 1 HETATM 50 H HMA3 HEC . . . D 4 19.3 12.916 30.966 1 0 ? HMA3 HEC 104 B 1 HETATM 51 H HAA1 HEC . . . D 4 18.526 11.282 29.592 1 0 ? HAA1 HEC 104 B 1 HETATM 52 H HAA2 HEC . . . D 4 17.282 11.009 28.367 1 0 ? HAA2 HEC 104 B 1 HETATM 53 H HBA1 HEC . . . D 4 15.763 10.043 30.012 1 0 ? HBA1 HEC 104 B 1 HETATM 54 H HBA2 HEC . . . D 4 16.765 10.585 31.354 1 0 ? HBA2 HEC 104 B 1 HETATM 55 H HMB1 HEC . . . D 4 17.303 19.462 32.497 1 0 ? HMB1 HEC 104 B 1 HETATM 56 H HMB2 HEC . . . D 4 16.415 18.586 33.749 1 0 ? HMB2 HEC 104 B 1 HETATM 57 H HMB3 HEC . . . D 4 17.585 17.735 32.729 1 0 ? HMB3 HEC 104 B 1 HETATM 58 H HAB HEC . . . D 4 13.961 21.377 30.649 1 0 ? HAB HEC 104 B 1 HETATM 59 H HBB1 HEC . . . D 4 16.337 20.945 30.587 1 0 ? HBB1 HEC 104 B 1 HETATM 60 H HBB2 HEC . . . D 4 15.458 22.392 31.099 1 0 ? HBB2 HEC 104 B 1 HETATM 61 H HBB3 HEC . . . D 4 16.092 21.274 32.308 1 0 ? HBB3 HEC 104 B 1 HETATM 62 H HMC1 HEC . . . D 4 10.982 20.581 27.623 1 0 ? HMC1 HEC 104 B 1 HETATM 63 H HMC2 HEC . . . D 4 9.337 20.172 28.131 1 0 ? HMC2 HEC 104 B 1 HETATM 64 H HMC3 HEC . . . D 4 10.589 20.462 29.345 1 0 ? HMC3 HEC 104 B 1 HETATM 65 H HAC HEC . . . D 4 8.629 16.456 26.118 1 0 ? HAC HEC 104 B 1 HETATM 66 H HBC1 HEC . . . D 4 9.477 18.729 25.522 1 0 ? HBC1 HEC 104 B 1 HETATM 67 H HBC2 HEC . . . D 4 7.827 18.113 25.389 1 0 ? HBC2 HEC 104 B 1 HETATM 68 H HBC3 HEC . . . D 4 8.292 19.098 26.778 1 0 ? HBC3 HEC 104 B 1 HETATM 69 H HMD1 HEC . . . D 4 10.087 11.473 26.121 1 0 ? HMD1 HEC 104 B 1 HETATM 70 H HMD2 HEC . . . D 4 9.537 13.15 26.053 1 0 ? HMD2 HEC 104 B 1 HETATM 71 H HMD3 HEC . . . D 4 10.617 12.521 24.8 1 0 ? HMD3 HEC 104 B 1 HETATM 72 H HAD1 HEC . . . D 4 12.217 10.081 26.242 1 0 ? HAD1 HEC 104 B 1 HETATM 73 H HAD2 HEC . . . D 4 13.856 10.226 26.884 1 0 ? HAD2 HEC 104 B 1 HETATM 74 H HBD1 HEC . . . D 4 14.512 11.609 24.982 1 0 ? HBD1 HEC 104 B 1 HETATM 75 H HBD2 HEC . . . D 4 12.867 11.634 24.382 1 0 ? HBD2 HEC 104 B 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 69 _model_server_stats.query_time_ms 3181 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 75 #