data_2JXA # _model_server_result.job_id kKGGk6EbJbb8W3rUj4sWLw _model_server_result.datetime_utc '2024-11-22 06:12:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2jxa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":136}' # _entry.id 2JXA # _exptl.entry_id 2JXA _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 164.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-L-rhamnopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 13 A CYS 41 1_555 A SG CYS 43 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? disulf ? disulf2 A SG CYS 22 A CYS 50 1_555 A SG CYS 100 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 55 A CYS 83 1_555 A SG CYS 87 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf4 A SG CYS 68 A CYS 96 1_555 A SG CYS 74 A CYS 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? covale ? covale1 A ND2 ASN 70 A ASN 98 1_555 B C1 NAG . A NAG 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? # _chem_comp.formula 'C6 H12 O5' _chem_comp.formula_weight 164.156 _chem_comp.id RAM _chem_comp.mon_nstd_flag . _chem_comp.name alpha-L-rhamnopyranose _chem_comp.type 'l-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-L-rhamnose;6-deoxy-alpha-L-mannopyranose;L-rhamnose;rhamnose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 RAM sing 284 n n C1 O1 RAM sing 285 n n C1 O5 RAM sing 286 n n C1 H1 RAM sing 287 n n C2 C3 RAM sing 288 n n C2 O2 RAM sing 289 n n C2 H2 RAM sing 290 n n C3 C4 RAM sing 291 n n C3 O3 RAM sing 292 n n C3 H3 RAM sing 293 n n C4 C5 RAM sing 294 n n C4 O4 RAM sing 295 n n C4 H4 RAM sing 296 n n C5 C6 RAM sing 297 n n C5 O5 RAM sing 298 n n C5 H5 RAM sing 299 n n C6 H61 RAM sing 300 n n C6 H62 RAM sing 301 n n C6 H63 RAM sing 302 n n O1 HO1 RAM sing 303 n n O2 HO2 RAM sing 304 n n O3 HO3 RAM sing 305 n n O4 HO4 RAM sing 306 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version RAM LRhapa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 RAM a-L-rhamnopyranose 'COMMON NAME' GMML 1 RAM a-L-Rhap 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 RAM Rha 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 2JXA _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG A 1 135 135 NAG NAG . C 3 RAM A 1 136 136 RAM RAM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 RAM . . . C 3 -9.669 -14.259 -26.245 1 0 ? C1 RAM 136 A 1 HETATM 2 C C2 RAM . . . C 3 -8.54 -13.202 -26.305 1 0 ? C2 RAM 136 A 1 HETATM 3 C C3 RAM . . . C 3 -7.623 -13.417 -25.083 1 0 ? C3 RAM 136 A 1 HETATM 4 C C4 RAM . . . C 3 -7.056 -14.847 -25.124 1 0 ? C4 RAM 136 A 1 HETATM 5 C C5 RAM . . . C 3 -8.238 -15.845 -25.105 1 0 ? C5 RAM 136 A 1 HETATM 6 C C6 RAM . . . C 3 -7.701 -17.276 -25.16 1 0 ? C6 RAM 136 A 1 HETATM 7 O O1 RAM . . . C 3 -10.429 -14.076 -25.05 1 0 ? O1 RAM 136 A 1 HETATM 8 O O2 RAM . . . C 3 -7.783 -13.373 -27.504 1 0 ? O2 RAM 136 A 1 HETATM 9 O O3 RAM . . . C 3 -6.552 -12.469 -25.109 1 0 ? O3 RAM 136 A 1 HETATM 10 O O4 RAM . . . C 3 -6.213 -15.073 -23.991 1 0 ? O4 RAM 136 A 1 HETATM 11 O O5 RAM . . . C 3 -9.11 -15.61 -26.255 1 0 ? O5 RAM 136 A 1 HETATM 12 H H1 RAM . . . C 3 -10.298 -14.158 -27.115 1 0 ? H1 RAM 136 A 1 HETATM 13 H H2 RAM . . . C 3 -8.969 -12.213 -26.265 1 0 ? H2 RAM 136 A 1 HETATM 14 H H3 RAM . . . C 3 -8.204 -13.297 -24.181 1 0 ? H3 RAM 136 A 1 HETATM 15 H H4 RAM . . . C 3 -6.498 -14.98 -26.037 1 0 ? H4 RAM 136 A 1 HETATM 16 H H5 RAM . . . C 3 -8.816 -15.71 -24.204 1 0 ? H5 RAM 136 A 1 HETATM 17 H H61 RAM . . . C 3 -8.514 -17.979 -25.048 1 0 ? H61 RAM 136 A 1 HETATM 18 H H62 RAM . . . C 3 -6.991 -17.432 -24.362 1 0 ? H62 RAM 136 A 1 HETATM 19 H H63 RAM . . . C 3 -7.212 -17.449 -26.106 1 0 ? H63 RAM 136 A 1 HETATM 20 H HO1 RAM . . . C 3 -10.322 -14.843 -24.483 1 0 ? HO1 RAM 136 A 1 HETATM 21 H HO2 RAM . . . C 3 -8.109 -12.771 -28.177 1 0 ? HO2 RAM 136 A 1 HETATM 22 H HO3 RAM . . . C 3 -5.715 -12.936 -25.06 1 0 ? HO3 RAM 136 A 1 HETATM 23 H HO4 RAM . . . C 3 -5.463 -14.474 -24.03 1 0 ? HO4 RAM 136 A 1 # _model_server_stats.io_time_ms 113 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 84 _model_server_stats.query_time_ms 6648 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #