data_2K74
#
_model_server_result.job_id            dFmIV5jwADGYDU8jMmK9Lg 
_model_server_result.datetime_utc      '2025-04-12 11:11:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2k74 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":201}' 
#
_entry.id    2K74 
#
_exptl.entry_id    2K74 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              318.407 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            UBIQUINONE-2 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             41 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              41 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            A 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             130 
_struct_conn.ptnr2_auth_asym_id             A 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              130 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.02 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C19 H26 O4' 
_chem_comp.formula_weight    318.407 
_chem_comp.id                UQ2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              UBIQUINONE-2 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 UQ2 sing 356 n n 
C1 C6 UQ2 sing 357 n n 
C1 O1 UQ2 doub 358 n n 
C2 C3 UQ2 doub 359 n n 
C2 O2 UQ2 sing 360 n n 
C3 C4 UQ2 sing 361 n n 
C3 O3 UQ2 sing 362 n n 
C4 C5 UQ2 sing 363 n n 
C4 O4 UQ2 doub 364 n n 
C5 C6 UQ2 doub 365 n n 
C5 CM5 UQ2 sing 366 n n 
C6 C7 UQ2 sing 367 n n 
CM2 O2 UQ2 sing 368 n n 
CM2 H2M1 UQ2 sing 369 n n 
CM2 H2M2 UQ2 sing 370 n n 
CM2 H2M3 UQ2 sing 371 n n 
CM3 O3 UQ2 sing 372 n n 
CM3 H3M1 UQ2 sing 373 n n 
CM3 H3M2 UQ2 sing 374 n n 
CM3 H3M3 UQ2 sing 375 n n 
CM5 H5M1 UQ2 sing 376 n n 
CM5 H5M2 UQ2 sing 377 n n 
CM5 H5M3 UQ2 sing 378 n n 
C7 C8 UQ2 sing 379 n n 
C7 H71 UQ2 sing 380 n n 
C7 H72 UQ2 sing 381 n n 
C8 C9 UQ2 doub 382 e n 
C8 H8 UQ2 sing 383 n n 
C9 C10 UQ2 sing 384 n n 
C9 C11 UQ2 sing 385 n n 
C10 H101 UQ2 sing 386 n n 
C10 H102 UQ2 sing 387 n n 
C10 H103 UQ2 sing 388 n n 
C11 C12 UQ2 sing 389 n n 
C11 H111 UQ2 sing 390 n n 
C11 H112 UQ2 sing 391 n n 
C12 C13 UQ2 sing 392 n n 
C12 H121 UQ2 sing 393 n n 
C12 H122 UQ2 sing 394 n n 
C13 C14 UQ2 doub 395 n n 
C13 H13 UQ2 sing 396 n n 
C14 C15 UQ2 sing 397 n n 
C14 C16 UQ2 sing 398 n n 
C15 H151 UQ2 sing 399 n n 
C15 H152 UQ2 sing 400 n n 
C15 H153 UQ2 sing 401 n n 
C16 H161 UQ2 sing 402 n n 
C16 H162 UQ2 sing 403 n n 
C16 H163 UQ2 sing 404 n n 
#
_atom_sites.entry_id                     2K74 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           UQ2 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      201 
_pdbx_nonpoly_scheme.auth_seq_num     201 
_pdbx_nonpoly_scheme.pdb_mon_id       UQ2 
_pdbx_nonpoly_scheme.auth_mon_id      UQ2 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 UQ2 . . . B 2 -9.673 4.07 5.412 1 20 ? C1 UQ2 201 A 1 
HETATM 2 C C2 UQ2 . . . B 2 -9.989 5.021 6.495 1 20 ? C2 UQ2 201 A 1 
HETATM 3 C C3 UQ2 . . . B 2 -9.018 5.795 7.015 1 20 ? C3 UQ2 201 A 1 
HETATM 4 C C4 UQ2 . . . B 2 -7.639 5.693 6.503 1 20 ? C4 UQ2 201 A 1 
HETATM 5 C C5 UQ2 . . . B 2 -7.32 4.741 5.42 1 20 ? C5 UQ2 201 A 1 
HETATM 6 C C6 UQ2 . . . B 2 -8.293 3.965 4.899 1 20 ? C6 UQ2 201 A 1 
HETATM 7 C CM2 UQ2 . . . B 2 -11.551 3.891 7.663 1 20 ? CM2 UQ2 201 A 1 
HETATM 8 C CM3 UQ2 . . . B 2 -9.736 7.896 7.379 1 20 ? CM3 UQ2 201 A 1 
HETATM 9 C CM5 UQ2 . . . B 2 -5.908 4.641 4.903 1 20 ? CM5 UQ2 201 A 1 
HETATM 10 C C7 UQ2 . . . B 2 -7.976 2.991 3.793 1 20 ? C7 UQ2 201 A 1 
HETATM 11 C C8 UQ2 . . . B 2 -7.355 1.752 4.388 1 20 ? C8 UQ2 201 A 1 
HETATM 12 C C9 UQ2 . . . B 2 -6.41 1.097 3.75 1 20 ? C9 UQ2 201 A 1 
HETATM 13 C C10 UQ2 . . . B 2 -5.925 1.573 2.4 1 20 ? C10 UQ2 201 A 1 
HETATM 14 C C11 UQ2 . . . B 2 -5.806 -0.141 4.371 1 20 ? C11 UQ2 201 A 1 
HETATM 15 C C12 UQ2 . . . B 2 -5.452 0.12 5.841 1 20 ? C12 UQ2 201 A 1 
HETATM 16 C C13 UQ2 . . . B 2 -4.057 -0.38 6.119 1 20 ? C13 UQ2 201 A 1 
HETATM 17 C C14 UQ2 . . . B 2 -3.013 0.34 5.777 1 20 ? C14 UQ2 201 A 1 
HETATM 18 C C15 UQ2 . . . B 2 -1.622 -0.171 6.06 1 20 ? C15 UQ2 201 A 1 
HETATM 19 C C16 UQ2 . . . B 2 -3.201 1.678 5.104 1 20 ? C16 UQ2 201 A 1 
HETATM 20 O O1 UQ2 . . . B 2 -10.55 3.371 4.943 1 20 ? O1 UQ2 201 A 1 
HETATM 21 O O2 UQ2 . . . B 2 -11.261 5.115 6.97 1 20 ? O2 UQ2 201 A 1 
HETATM 22 O O3 UQ2 . . . B 2 -9.31 6.677 8.008 1 20 ? O3 UQ2 201 A 1 
HETATM 23 O O4 UQ2 . . . B 2 -6.763 6.392 6.973 1 20 ? O4 UQ2 201 A 1 
HETATM 24 H H2M1 UQ2 . . . B 2 -10.834 3.74 8.455 1 0 ? H2M1 UQ2 201 A 1 
HETATM 25 H H2M2 UQ2 . . . B 2 -11.505 3.062 6.967 1 0 ? H2M2 UQ2 201 A 1 
HETATM 26 H H2M3 UQ2 . . . B 2 -12.54 3.946 8.09 1 0 ? H2M3 UQ2 201 A 1 
HETATM 27 H H3M1 UQ2 . . . B 2 -8.949 8.274 6.743 1 0 ? H3M1 UQ2 201 A 1 
HETATM 28 H H3M2 UQ2 . . . B 2 -9.967 8.629 8.14 1 0 ? H3M2 UQ2 201 A 1 
HETATM 29 H H3M3 UQ2 . . . B 2 -10.613 7.71 6.783 1 0 ? H3M3 UQ2 201 A 1 
HETATM 30 H H5M1 UQ2 . . . B 2 -5.619 3.603 4.839 1 0 ? H5M1 UQ2 201 A 1 
HETATM 31 H H5M2 UQ2 . . . B 2 -5.241 5.159 5.577 1 0 ? H5M2 UQ2 201 A 1 
HETATM 32 H H5M3 UQ2 . . . B 2 -5.849 5.092 3.924 1 0 ? H5M3 UQ2 201 A 1 
HETATM 33 H H71 UQ2 . . . B 2 -7.287 3.448 3.101 1 0 ? H71 UQ2 201 A 1 
HETATM 34 H H72 UQ2 . . . B 2 -8.887 2.727 3.276 1 0 ? H72 UQ2 201 A 1 
HETATM 35 H H8 UQ2 . . . B 2 -7.691 1.399 5.352 1 0 ? H8 UQ2 201 A 1 
HETATM 36 H H101 UQ2 . . . B 2 -5.388 0.776 1.908 1 0 ? H101 UQ2 201 A 1 
HETATM 37 H H102 UQ2 . . . B 2 -5.269 2.42 2.532 1 0 ? H102 UQ2 201 A 1 
HETATM 38 H H103 UQ2 . . . B 2 -6.771 1.863 1.794 1 0 ? H103 UQ2 201 A 1 
HETATM 39 H H111 UQ2 . . . B 2 -4.91 -0.413 3.834 1 0 ? H111 UQ2 201 A 1 
HETATM 40 H H112 UQ2 . . . B 2 -6.518 -0.953 4.313 1 0 ? H112 UQ2 201 A 1 
HETATM 41 H H121 UQ2 . . . B 2 -6.151 -0.403 6.477 1 0 ? H121 UQ2 201 A 1 
HETATM 42 H H122 UQ2 . . . B 2 -5.5 1.18 6.05 1 0 ? H122 UQ2 201 A 1 
HETATM 43 H H13 UQ2 . . . B 2 -3.916 -1.336 6.6 1 0 ? H13 UQ2 201 A 1 
HETATM 44 H H151 UQ2 . . . B 2 -0.96 0.664 6.232 1 0 ? H151 UQ2 201 A 1 
HETATM 45 H H152 UQ2 . . . B 2 -1.269 -0.741 5.213 1 0 ? H152 UQ2 201 A 1 
HETATM 46 H H153 UQ2 . . . B 2 -1.641 -0.802 6.937 1 0 ? H153 UQ2 201 A 1 
HETATM 47 H H161 UQ2 . . . B 2 -3.827 2.306 5.721 1 0 ? H161 UQ2 201 A 1 
HETATM 48 H H162 UQ2 . . . B 2 -3.67 1.535 4.142 1 0 ? H162 UQ2 201 A 1 
HETATM 49 H H163 UQ2 . . . B 2 -2.24 2.151 4.97 1 0 ? H163 UQ2 201 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    72 
_model_server_stats.query_time_ms           4453 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           49 
#