data_2KB2
#
_model_server_result.job_id            AdsweATAkdY7AHVvpnUdWQ 
_model_server_result.datetime_utc      '2024-11-28 17:39:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2kb2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":149}' 
#
_entry.id    2KB2 
#
_exptl.entry_id    2KB2 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     2KB2 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          B 
_pdbx_nonpoly_scheme.entity_id        2 
_pdbx_nonpoly_scheme.mon_id           FMN 
_pdbx_nonpoly_scheme.pdb_strand_id    A 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      149 
_pdbx_nonpoly_scheme.auth_seq_num     149 
_pdbx_nonpoly_scheme.pdb_mon_id       FMN 
_pdbx_nonpoly_scheme.auth_mon_id      FMN 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . B 2 3.883 10.709 -0.494 1 35.81 ? N1 FMN 149 A 1 
HETATM 2 C C2 FMN . . . B 2 4.952 9.848 -0.545 1 36.65 ? C2 FMN 149 A 1 
HETATM 3 O O2 FMN . . . B 2 6.088 10.206 -0.689 1 38.2 ? O2 FMN 149 A 1 
HETATM 4 N N3 FMN . . . B 2 4.719 8.429 -0.423 1 36.21 ? N3 FMN 149 A 1 
HETATM 5 C C4 FMN . . . B 2 3.492 7.865 -0.256 1 36.48 ? C4 FMN 149 A 1 
HETATM 6 O O4 FMN . . . B 2 3.384 6.637 -0.157 1 35.01 ? O4 FMN 149 A 1 
HETATM 7 C C4A FMN . . . B 2 2.346 8.783 -0.206 1 37.63 ? C4A FMN 149 A 1 
HETATM 8 N N5 FMN . . . B 2 1.109 8.318 -0.052 1 37.5 ? N5 FMN 149 A 1 
HETATM 9 C C5A FMN . . . B 2 0.06 9.202 -0.012 1 37.24 ? C5A FMN 149 A 1 
HETATM 10 C C6 FMN . . . B 2 -1.304 8.692 0.154 1 36.34 ? C6 FMN 149 A 1 
HETATM 11 C C7 FMN . . . B 2 -2.402 9.509 0.204 1 34.82 ? C7 FMN 149 A 1 
HETATM 12 C C7M FMN . . . B 2 -3.83 8.952 0.379 1 36.54 ? C7M FMN 149 A 1 
HETATM 13 C C8 FMN . . . B 2 -2.219 10.985 0.089 1 34.02 ? C8 FMN 149 A 1 
HETATM 14 C C8M FMN . . . B 2 -3.386 11.933 0.138 1 36.26 ? C8M FMN 149 A 1 
HETATM 15 C C9 FMN . . . B 2 -0.918 11.487 -0.073 1 36.07 ? C9 FMN 149 A 1 
HETATM 16 C C9A FMN . . . B 2 0.221 10.656 -0.126 1 36.13 ? C9A FMN 149 A 1 
HETATM 17 N N10 FMN . . . B 2 1.568 11.112 -0.289 1 36.86 ? N10 FMN 149 A 1 
HETATM 18 C C10 FMN . . . B 2 2.647 10.242 -0.338 1 37.11 ? C10 FMN 149 A 1 
HETATM 19 C C1' FMN . . . B 2 1.857 12.56 -0.413 1 34 ? C1' FMN 149 A 1 
HETATM 20 C C2' FMN . . . B 2 1.731 13.035 -1.861 1 31.39 ? C2' FMN 149 A 1 
HETATM 21 O O2' FMN . . . B 2 2.662 12.317 -2.662 1 29.45 ? O2' FMN 149 A 1 
HETATM 22 C C3' FMN . . . B 2 1.832 14.532 -2.063 1 29.29 ? C3' FMN 149 A 1 
HETATM 23 O O3' FMN . . . B 2 2.832 15.036 -1.184 1 28.3 ? O3' FMN 149 A 1 
HETATM 24 C C4' FMN . . . B 2 0.524 15.297 -1.963 1 29.96 ? C4' FMN 149 A 1 
HETATM 25 O O4' FMN . . . B 2 -0.385 14.757 -2.915 1 31.47 ? O4' FMN 149 A 1 
HETATM 26 C C5' FMN . . . B 2 0.604 16.813 -2.051 1 29.17 ? C5' FMN 149 A 1 
HETATM 27 O O5' FMN . . . B 2 1.964 17.254 -2.219 1 32.1 ? O5' FMN 149 A 1 
HETATM 28 P P FMN . . . B 2 2.351 18.784 -2.214 1 34.33 ? P FMN 149 A 1 
HETATM 29 O O1P FMN . . . B 2 1.925 19.356 -0.884 1 32.34 ? O1P FMN 149 A 1 
HETATM 30 O O2P FMN . . . B 2 1.716 19.441 -3.404 1 30.92 ? O2P FMN 149 A 1 
HETATM 31 O O3P FMN . . . B 2 3.922 18.76 -2.294 1 30.7 ? O3P FMN 149 A 1 
HETATM 32 H HN3 FMN . . . B 2 5.468 7.826 -0.609 1 0.87 ? HN3 FMN 149 A 1 
HETATM 33 H H6 FMN . . . B 2 -1.46 7.624 0.128 1 0.87 ? H6 FMN 149 A 1 
HETATM 34 H HM71 FMN . . . B 2 -3.779 7.965 0.812 1 0.87 ? HM71 FMN 149 A 1 
HETATM 35 H HM72 FMN . . . B 2 -4.317 8.895 -0.586 1 0.87 ? HM72 FMN 149 A 1 
HETATM 36 H HM73 FMN . . . B 2 -4.397 9.6 1.031 1 0.87 ? HM73 FMN 149 A 1 
HETATM 37 H HM81 FMN . . . B 2 -3.026 12.937 0.302 1 0.87 ? HM81 FMN 149 A 1 
HETATM 38 H HM82 FMN . . . B 2 -3.926 11.892 -0.796 1 0.87 ? HM82 FMN 149 A 1 
HETATM 39 H HM83 FMN . . . B 2 -4.046 11.655 0.948 1 0.87 ? HM83 FMN 149 A 1 
HETATM 40 H H9 FMN . . . B 2 -0.782 12.555 -0.155 1 0.87 ? H9 FMN 149 A 1 
HETATM 41 H "H1'1" FMN . . . B 2 2.865 12.742 -0.07 1 0.87 ? "H1'1" FMN 149 A 1 
HETATM 42 H "H1'2" FMN . . . B 2 1.16 13.108 0.201 1 0.87 ? "H1'2" FMN 149 A 1 
HETATM 43 H H2' FMN . . . B 2 0.747 12.744 -2.197 1 0.87 ? H2' FMN 149 A 1 
HETATM 44 H HO2' FMN . . . B 2 3.554 12.617 -2.465 1 0.87 ? HO2' FMN 149 A 1 
HETATM 45 H H3' FMN . . . B 2 2.198 14.682 -3.069 1 0.87 ? H3' FMN 149 A 1 
HETATM 46 H HO3' FMN . . . B 2 2.51 15.004 -0.28 1 0.87 ? HO3' FMN 149 A 1 
HETATM 47 H H4' FMN . . . B 2 0.115 15.072 -0.99 1 0.87 ? H4' FMN 149 A 1 
HETATM 48 H HO4' FMN . . . B 2 0.017 14.003 -3.35 1 0.87 ? HO4' FMN 149 A 1 
HETATM 49 H "H5'1" FMN . . . B 2 0.206 17.239 -1.142 1 0.87 ? "H5'1" FMN 149 A 1 
HETATM 50 H "H5'2" FMN . . . B 2 0.02 17.148 -2.894 1 0.87 ? "H5'2" FMN 149 A 1 
#
_model_server_stats.io_time_ms              78 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    52 
_model_server_stats.query_time_ms           6058 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           50 
#