data_2KG8 # _model_server_result.job_id 0duHb0emaPrOvTj9Otac8A _model_server_result.datetime_utc '2024-10-19 10:36:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2kg8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":87}' # _entry.id 2KG8 # _exptl.entry_id 2KG8 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 444.394 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-{[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}-3-oxopropanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 42 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 42 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P24 _struct_conn.ptnr2_label_comp_id SXM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SXM _struct_conn.ptnr2_auth_seq_id 87 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.543 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H25 N2 O10 P S' _chem_comp.formula_weight 444.394 _chem_comp.id SXM _chem_comp.mon_nstd_flag . _chem_comp.name '3-{[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl]sulfanyl}-3-oxopropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'THIOMALONIC ACID S-{2-[3-(2-HYDROXY-3,3-DIMETHYL-4-PHOSPHONOOXY-BUTYRYLAMINO)-PROPIONYLAMINO]-ETHYL} ESTER' # _atom_sites.entry_id 2KG8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id SXM _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 87 _pdbx_nonpoly_scheme.auth_seq_num 87 _pdbx_nonpoly_scheme.pdb_mon_id SXM _pdbx_nonpoly_scheme.auth_mon_id SXM _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P24 SXM . . . B 2 8.979 9.864 0.008 1 1.21 ? P24 SXM 87 A 1 HETATM 2 O O26 SXM . . . B 2 9.343 9.593 -1.396 1 1.74 ? O26 SXM 87 A 1 HETATM 3 O O23 SXM . . . B 2 9.906 10.667 0.843 1 1.8 ? O23 SXM 87 A 1 HETATM 4 O O27 SXM . . . B 2 7.565 10.513 0.077 1 1.38 ? O27 SXM 87 A 1 HETATM 5 C C28 SXM . . . B 2 7.365 11.791 -0.609 1 1.45 ? C28 SXM 87 A 1 HETATM 6 C C29 SXM . . . B 2 5.988 12.393 -0.267 1 1.8 ? C29 SXM 87 A 1 HETATM 7 C C30 SXM . . . B 2 4.943 11.422 -0.763 1 2.11 ? C30 SXM 87 A 1 HETATM 8 C C31 SXM . . . B 2 5.841 12.563 1.239 1 2.36 ? C31 SXM 87 A 1 HETATM 9 C C32 SXM . . . B 2 5.764 13.798 -0.98 1 2.39 ? C32 SXM 87 A 1 HETATM 10 O O33 SXM . . . B 2 5.384 13.661 -2.36 1 2.9 ? O33 SXM 87 A 1 HETATM 11 C C34 SXM . . . B 2 6.982 14.72 -0.904 1 3.07 ? C34 SXM 87 A 1 HETATM 12 O O35 SXM . . . B 2 7.77 14.745 0.059 1 3.59 ? O35 SXM 87 A 1 HETATM 13 N N36 SXM . . . B 2 7.121 15.459 -1.956 1 3.6 ? N36 SXM 87 A 1 HETATM 14 C C37 SXM . . . B 2 8.202 16.418 -2.187 1 4.62 ? C37 SXM 87 A 1 HETATM 15 C C38 SXM . . . B 2 8.236 16.942 -3.637 1 5.3 ? C38 SXM 87 A 1 HETATM 16 C C39 SXM . . . B 2 8.205 15.837 -4.7 1 5.85 ? C39 SXM 87 A 1 HETATM 17 O O40 SXM . . . B 2 8.188 14.629 -4.403 1 6.03 ? O40 SXM 87 A 1 HETATM 18 N N41 SXM . . . B 2 8.199 16.254 -5.943 1 6.44 ? N41 SXM 87 A 1 HETATM 19 C C42 SXM . . . B 2 8.151 15.346 -7.07 1 7.23 ? C42 SXM 87 A 1 HETATM 20 C C43 SXM . . . B 2 9.245 15.59 -8.081 1 7.98 ? C43 SXM 87 A 1 HETATM 21 S S1 SXM . . . B 2 9.179 14.317 -9.247 1 8.65 ? S1 SXM 87 A 1 HETATM 22 C C1 SXM . . . B 2 9.572 12.962 -8.2 1 9.38 ? C1 SXM 87 A 1 HETATM 23 O O1 SXM . . . B 2 10.225 13.055 -7.126 1 9.42 ? O1 SXM 87 A 1 HETATM 24 C C2 SXM . . . B 2 9.071 11.613 -8.692 1 10.27 ? C2 SXM 87 A 1 HETATM 25 C C3 SXM . . . B 2 7.553 11.374 -8.651 1 10.74 ? C3 SXM 87 A 1 HETATM 26 O O3A SXM . . . B 2 7.102 10.339 -9.203 1 10.77 ? O3A SXM 87 A 1 HETATM 27 O O3B SXM . . . B 2 6.782 12.185 -8.063 1 11.31 ? O3B SXM 87 A 1 HETATM 28 H H28 SXM . . . B 2 8.145 12.455 -0.27 1 1.9 ? H28 SXM 87 A 1 HETATM 29 H H28A SXM . . . B 2 7.455 11.633 -1.673 1 1.71 ? H28A SXM 87 A 1 HETATM 30 H H30 SXM . . . B 2 3.958 11.809 -0.544 1 2.41 ? H30 SXM 87 A 1 HETATM 31 H H30A SXM . . . B 2 5.073 10.47 -0.271 1 2.48 ? H30A SXM 87 A 1 HETATM 32 H H30B SXM . . . B 2 5.048 11.293 -1.83 1 2.45 ? H30B SXM 87 A 1 HETATM 33 H H31 SXM . . . B 2 6.617 13.221 1.603 1 2.72 ? H31 SXM 87 A 1 HETATM 34 H H31A SXM . . . B 2 5.931 11.601 1.721 1 2.71 ? H31A SXM 87 A 1 HETATM 35 H H31B SXM . . . B 2 4.874 12.989 1.463 1 2.8 ? H31B SXM 87 A 1 HETATM 36 H H32 SXM . . . B 2 4.949 14.307 -0.483 1 2.82 ? H32 SXM 87 A 1 HETATM 37 H HO33 SXM . . . B 2 5.94 12.989 -2.78 1 3.21 ? HO33 SXM 87 A 1 HETATM 38 H HN36 SXM . . . B 2 6.431 15.319 -2.644 1 3.57 ? HN36 SXM 87 A 1 HETATM 39 H H37 SXM . . . B 2 9.141 15.919 -2 1 4.93 ? H37 SXM 87 A 1 HETATM 40 H H37A SXM . . . B 2 8.112 17.252 -1.507 1 4.93 ? H37A SXM 87 A 1 HETATM 41 H H38 SXM . . . B 2 7.348 17.539 -3.789 1 5.53 ? H38 SXM 87 A 1 HETATM 42 H H38A SXM . . . B 2 9.117 17.548 -3.782 1 5.57 ? H38A SXM 87 A 1 HETATM 43 H HN41 SXM . . . B 2 8.222 17.22 -6.133 1 6.52 ? HN41 SXM 87 A 1 HETATM 44 H H42 SXM . . . B 2 8.269 14.34 -6.695 1 7.44 ? H42 SXM 87 A 1 HETATM 45 H H42A SXM . . . B 2 7.19 15.439 -7.552 1 7.35 ? H42A SXM 87 A 1 HETATM 46 H H43 SXM . . . B 2 10.206 15.538 -7.589 1 8.27 ? H43 SXM 87 A 1 HETATM 47 H H43A SXM . . . B 2 9.106 16.541 -8.574 1 8.08 ? H43A SXM 87 A 1 HETATM 48 H H2 SXM . . . B 2 9.529 10.864 -8.062 1 10.55 ? H2 SXM 87 A 1 HETATM 49 H H2A SXM . . . B 2 9.404 11.462 -9.707 1 10.54 ? H2A SXM 87 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 5763 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 49 #