data_2KGK # _model_server_result.job_id gu_-kDBixz1AIvSUT6ox-A _model_server_result.datetime_utc '2025-03-01 05:41:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2kgk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":174}' # _entry.id 2KGK # _exptl.entry_id 2KGK _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 312.366 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H20 N4 O2' _chem_comp.formula_weight 312.366 _chem_comp.id N22 _chem_comp.mon_nstd_flag . _chem_comp.name 5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-ethylpyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 N22 sing 235 n n C7 C5 N22 sing 236 n n C5 N4 N22 doub 237 n y C5 C6 N22 sing 238 n y N4 C3 N22 sing 239 n y C3 N8 N22 sing 240 n n C3 N2 N22 doub 241 n y N2 C1 N22 sing 242 n y C1 N7 N22 sing 243 n n C1 C6 N22 doub 244 n y C6 C9 N22 sing 245 n n C9 C10 N22 trip 246 n n C10 C11 N22 sing 247 n n C11 C13 N22 sing 248 n n C13 C18 N22 doub 249 n y C13 C14 N22 sing 250 n y C18 C17 N22 sing 251 n y C17 O2 N22 sing 252 n n C17 C16 N22 doub 253 n y O2 C4 N22 sing 254 n n C16 C15 N22 sing 255 n y C15 C14 N22 doub 256 n y C14 O10 N22 sing 257 n n O10 C2 N22 sing 258 n n C8 H8 N22 sing 259 n n C8 H8A N22 sing 260 n n C8 H8B N22 sing 261 n n C7 H7 N22 sing 262 n n C7 H7A N22 sing 263 n n N8 HN8 N22 sing 264 n n N8 HN8A N22 sing 265 n n N7 HN7 N22 sing 266 n n N7 HN7A N22 sing 267 n n C11 H11 N22 sing 268 n n C11 H11A N22 sing 269 n n C18 H18 N22 sing 270 n n C4 H4 N22 sing 271 n n C4 H4A N22 sing 272 n n C4 H4B N22 sing 273 n n C16 H16 N22 sing 274 n n C15 H15 N22 sing 275 n n C2 H2 N22 sing 276 n n C2 H2A N22 sing 277 n n C2 H2B N22 sing 278 n n # _atom_sites.entry_id 2KGK _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 173 163 NAP NAP . C 3 N22 A 1 174 164 N22 N22 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8 N22 . . . C 3 23.543 2.339 -12.354 1 20 ? C8 N22 174 A 1 HETATM 2 C C7 N22 . . . C 3 22.851 3.704 -12.392 1 20 ? C7 N22 174 A 1 HETATM 3 C C5 N22 . . . C 3 21.385 3.588 -11.971 1 20 ? C5 N22 174 A 1 HETATM 4 N N4 N22 . . . C 3 20.753 2.431 -12.213 1 20 ? N4 N22 174 A 1 HETATM 5 C C3 N22 . . . C 3 19.468 2.249 -11.875 1 20 ? C3 N22 174 A 1 HETATM 6 N N8 N22 . . . C 3 18.881 1.084 -12.135 1 20 ? N8 N22 174 A 1 HETATM 7 N N2 N22 . . . C 3 18.77 3.225 -11.279 1 20 ? N2 N22 174 A 1 HETATM 8 C C1 N22 . . . C 3 19.345 4.405 -11.01 1 20 ? C1 N22 174 A 1 HETATM 9 N N7 N22 . . . C 3 18.649 5.371 -10.419 1 20 ? N7 N22 174 A 1 HETATM 10 C C6 N22 . . . C 3 20.675 4.611 -11.353 1 20 ? C6 N22 174 A 1 HETATM 11 C C9 N22 . . . C 3 21.308 5.864 -11.076 1 20 ? C9 N22 174 A 1 HETATM 12 C C10 N22 . . . C 3 21.849 6.936 -10.838 1 20 ? C10 N22 174 A 1 HETATM 13 C C11 N22 . . . C 3 22.498 8.221 -10.55 1 20 ? C11 N22 174 A 1 HETATM 14 C C13 N22 . . . C 3 22.936 8.919 -11.84 1 20 ? C13 N22 174 A 1 HETATM 15 C C18 N22 . . . C 3 22.002 9.027 -12.863 1 20 ? C18 N22 174 A 1 HETATM 16 C C17 N22 . . . C 3 22.328 9.654 -14.06 1 20 ? C17 N22 174 A 1 HETATM 17 O O2 N22 . . . C 3 21.401 9.755 -15.05 1 20 ? O2 N22 174 A 1 HETATM 18 C C4 N22 . . . C 3 20.847 8.464 -15.32 1 20 ? C4 N22 174 A 1 HETATM 19 C C16 N22 . . . C 3 23.6 10.181 -14.244 1 20 ? C16 N22 174 A 1 HETATM 20 C C15 N22 . . . C 3 24.541 10.077 -13.226 1 20 ? C15 N22 174 A 1 HETATM 21 C C14 N22 . . . C 3 24.208 9.448 -12.032 1 20 ? C14 N22 174 A 1 HETATM 22 O O10 N22 . . . C 3 25.135 9.351 -11.041 1 20 ? O10 N22 174 A 1 HETATM 23 C C2 N22 . . . C 3 26.076 8.325 -11.368 1 20 ? C2 N22 174 A 1 HETATM 24 H HN8 N22 . . . C 3 19.394 0.355 -12.587 1 20 ? HN8 N22 174 A 1 HETATM 25 H HN8A N22 . . . C 3 17.925 0.939 -11.878 1 20 ? HN8A N22 174 A 1 HETATM 26 H HN7 N22 . . . C 3 17.652 5.392 -10.502 1 20 ? HN7 N22 174 A 1 HETATM 27 H HN7A N22 . . . C 3 19.121 6.076 -9.891 1 20 ? HN7A N22 174 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 4260 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #