data_2KK5 # _model_server_result.job_id ILmAWKwVV92a7Lci9d6lJA _model_server_result.datetime_utc '2025-03-04 06:16:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2kk5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":7}' # _entry.id 2KK5 # _exptl.entry_id 2KK5 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 251.237 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 9,10-dioxo-9,10-dihydroanthracene-2-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A O3' DG 5 A DG 5 1_555 A P 2AU 6 A 2AU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.609 ? covale ? covale2 A C2' 2AU 6 A 2AU 6 1_555 C N2' AQC . A AQC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale3 B O3' DG 5 B DG 5 1_555 B P 2AU 6 B 2AU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.61 ? covale ? covale4 B C2' 2AU 6 B 2AU 6 1_555 D N2' AQC . B AQC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? hydrog WATSON-CRICK hydrog1 A N3 DC 2 A DC 2 1_555 B N1 DG 5 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 2 A DC 2 1_555 B O6 DG 5 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 2 A DC 2 1_555 B N2 DG 5 B DG 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 3 A DG 3 1_555 B N3 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 3 A DG 3 1_555 B O2 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 3 A DG 3 1_555 B N4 DC 4 B DC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 4 A DC 4 1_555 B N1 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 4 A DC 4 1_555 B O6 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 4 A DC 4 1_555 B N2 DG 3 B DG 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 5 A DG 5 1_555 B N3 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 5 A DG 5 1_555 B O2 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 5 A DG 5 1_555 B N4 DC 2 B DC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C15 H9 N O3' _chem_comp.formula_weight 251.237 _chem_comp.id AQC _chem_comp.mon_nstd_flag . _chem_comp.name 9,10-dioxo-9,10-dihydroanthracene-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C4A AQC doub 37 n y C4A C10 AQC sing 38 n n C4A C1A AQC sing 39 n y C1 C1A AQC doub 40 n y C1A C9 AQC sing 41 n n C9 C8A AQC sing 42 n n C9 O9 AQC doub 43 n n C5A C8A AQC doub 44 n y C8A C8 AQC sing 45 n y C10 C5A AQC sing 46 n n C5A C5 AQC sing 47 n y O10 C10 AQC doub 48 n n H4 C4 AQC sing 49 n n C3 C4 AQC sing 50 n y H3 C3 AQC sing 51 n n C3 C2 AQC doub 52 n y C1L C2 AQC sing 53 n n C2 C1 AQC sing 54 n y C1 H1 AQC sing 55 n n C8 C7 AQC doub 56 n y C8 H8 AQC sing 57 n n H5 C5 AQC sing 58 n n C5 C6 AQC doub 59 n y C6 C7 AQC sing 60 n y C7 H7 AQC sing 61 n n C6 H6 AQC sing 62 n n N2' C1L AQC sing 63 n n C1L O1L AQC doub 64 n n HN2' N2' AQC sing 65 n n N2' HN2A AQC sing 66 n n # _atom_sites.entry_id 2KK5 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 AQC A 1 7 7 AQC AQC . D 2 AQC B 1 7 7 AQC AQC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4A AQC . . . C 2 -4.483 -1.183 6.61 1 0 ? C4A AQC 7 A 1 HETATM 2 C C1A AQC . . . C 2 -5.385 -1.485 5.565 1 0 ? C1A AQC 7 A 1 HETATM 3 C C9 AQC . . . C 2 -6.148 -0.403 4.866 1 0 ? C9 AQC 7 A 1 HETATM 4 C C8A AQC . . . C 2 -5.911 1.003 5.32 1 0 ? C8A AQC 7 A 1 HETATM 5 C C5A AQC . . . C 2 -5.007 1.296 6.363 1 0 ? C5A AQC 7 A 1 HETATM 6 C C10 AQC . . . C 2 -4.251 0.22 7.061 1 0 ? C10 AQC 7 A 1 HETATM 7 C C4 AQC . . . C 2 -3.786 -2.216 7.241 1 0 ? C4 AQC 7 A 1 HETATM 8 C C3 AQC . . . C 2 -3.979 -3.537 6.84 1 0 ? C3 AQC 7 A 1 HETATM 9 C C2 AQC . . . C 2 -4.877 -3.847 5.798 1 0 ? C2 AQC 7 A 1 HETATM 10 C C1 AQC . . . C 2 -5.572 -2.812 5.172 1 0 ? C1 AQC 7 A 1 HETATM 11 C C8 AQC . . . C 2 -6.6 2.047 4.694 1 0 ? C8 AQC 7 A 1 HETATM 12 C C5 AQC . . . C 2 -4.813 2.624 6.755 1 0 ? C5 AQC 7 A 1 HETATM 13 C C7 AQC . . . C 2 -6.395 3.365 5.097 1 0 ? C7 AQC 7 A 1 HETATM 14 C C6 AQC . . . C 2 -5.5 3.651 6.128 1 0 ? C6 AQC 7 A 1 HETATM 15 C C1L AQC . . . C 2 -5.155 -5.241 5.291 1 0 ? C1L AQC 7 A 1 HETATM 16 N N2' AQC . . . C 2 -4.49 -6.269 5.883 1 0 ? N2' AQC 7 A 1 HETATM 17 O O9 AQC . . . C 2 -6.927 -0.658 3.964 1 0 ? O9 AQC 7 A 1 HETATM 18 O O10 AQC . . . C 2 -3.473 0.469 7.961 1 0 ? O10 AQC 7 A 1 HETATM 19 O O1L AQC . . . C 2 -5.946 -5.435 4.383 1 0 ? O1L AQC 7 A 1 HETATM 20 H H4 AQC . . . C 2 -3.1 -1.961 8.04 1 0 ? H4 AQC 7 A 1 HETATM 21 H H3 AQC . . . C 2 -3.421 -4.309 7.35 1 0 ? H3 AQC 7 A 1 HETATM 22 H H1 AQC . . . C 2 -6.261 -3.045 4.372 1 0 ? H1 AQC 7 A 1 HETATM 23 H H8 AQC . . . C 2 -7.285 1.804 3.903 1 0 ? H8 AQC 7 A 1 HETATM 24 H H5 AQC . . . C 2 -4.118 2.828 7.553 1 0 ? H5 AQC 7 A 1 HETATM 25 H H7 AQC . . . C 2 -6.928 4.166 4.611 1 0 ? H7 AQC 7 A 1 HETATM 26 H H6 AQC . . . C 2 -5.34 4.672 6.44 1 0 ? H6 AQC 7 A 1 HETATM 27 H HN2' AQC . . . C 2 -3.785 -6.052 6.697 1 0 ? HN2' AQC 7 A 1 # _model_server_stats.io_time_ms 4 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 834 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 27 #