data_2KO7 # _model_server_result.job_id 86f75kPW1BPaGpzmKPCFcg _model_server_result.datetime_utc '2025-03-03 16:25:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ko7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":130}' # _entry.id 2KO7 # _exptl.entry_id 2KO7 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 367.437 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl (4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}-2,6-dioxopiperidin-1-yl)acetate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H29 N O6' _chem_comp.formula_weight 367.437 _chem_comp.id JZF _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl (4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}-2,6-dioxopiperidin-1-yl)acetate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 JZF sing 158 n n N1 C6 JZF sing 159 n n N1 C15 JZF sing 160 n n O1 C10 JZF doub 161 n n C2 O2 JZF doub 162 n n C2 C3 JZF sing 163 n n C3 C4 JZF sing 164 n n C3 H13 JZF sing 165 n n C3 H23 JZF sing 166 n n O3 C6 JZF doub 167 n n C4 C5 JZF sing 168 n n C4 C7 JZF sing 169 n n C4 H4 JZF sing 170 n n O4 C21 JZF doub 171 n n C5 C6 JZF sing 172 n n C5 H15 JZF sing 173 n n C5 H25 JZF sing 174 n n O5 C16 JZF sing 175 n n O5 C21 JZF sing 176 n n C7 C8 JZF sing 177 n n C7 H17 JZF sing 178 n n C7 H27 JZF sing 179 n n C8 C9 JZF sing 180 n n C8 OH JZF sing 181 n n C8 H8 JZF sing 182 n n C9 C10 JZF sing 183 n n C9 C14 JZF sing 184 n n C9 H9 JZF sing 185 n n OH H1OH JZF sing 186 n n C10 C11 JZF sing 187 n n C11 C12 JZF sing 188 n n C11 C18 JZF sing 189 n n C11 H11 JZF sing 190 n n C12 C13 JZF sing 191 n n C12 H112 JZF sing 192 n n C12 H212 JZF sing 193 n n C13 C14 JZF sing 194 n n C13 C19 JZF sing 195 n n C13 H13A JZF sing 196 n n C14 H114 JZF sing 197 n n C14 H214 JZF sing 198 n n C15 C21 JZF sing 199 n n C15 H115 JZF sing 200 n n C15 H215 JZF sing 201 n n C16 C17 JZF sing 202 n n C16 H116 JZF sing 203 n n C16 H216 JZF sing 204 n n C17 H117 JZF sing 205 n n C17 H217 JZF sing 206 n n C17 H317 JZF sing 207 n n C18 H118 JZF sing 208 n n C18 H218 JZF sing 209 n n C18 H318 JZF sing 210 n n C19 H119 JZF sing 211 n n C19 H219 JZF sing 212 n n C19 H319 JZF sing 213 n n # _atom_sites.entry_id 2KO7 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id JZF _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 130 _pdbx_nonpoly_scheme.auth_seq_num 130 _pdbx_nonpoly_scheme.pdb_mon_id JZF _pdbx_nonpoly_scheme.auth_mon_id JZF _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 JZF . . . B 2 -20.479 -5.59 0.582 1 0 ? N1 JZF 130 A 1 HETATM 2 O O1 JZF . . . B 2 -19.672 -3.057 -4.78 1 0 ? O1 JZF 130 A 1 HETATM 3 C C2 JZF . . . B 2 -20.949 -4.982 -0.552 1 0 ? C2 JZF 130 A 1 HETATM 4 O O2 JZF . . . B 2 -22.133 -4.976 -0.824 1 0 ? O2 JZF 130 A 1 HETATM 5 C C3 JZF . . . B 2 -19.98 -4.308 -1.508 1 0 ? C3 JZF 130 A 1 HETATM 6 O O3 JZF . . . B 2 -18.776 -6.117 1.968 1 0 ? O3 JZF 130 A 1 HETATM 7 C C4 JZF . . . B 2 -18.75 -3.759 -0.772 1 0 ? C4 JZF 130 A 1 HETATM 8 O O4 JZF . . . B 2 -23.284 -7.731 0.891 1 0 ? O4 JZF 130 A 1 HETATM 9 C C5 JZF . . . B 2 -18.133 -4.886 0.072 1 0 ? C5 JZF 130 A 1 HETATM 10 O O5 JZF . . . B 2 -21.199 -8.257 0.168 1 0 ? O5 JZF 130 A 1 HETATM 11 C C6 JZF . . . B 2 -19.16 -5.569 0.953 1 0 ? C6 JZF 130 A 1 HETATM 12 C C7 JZF . . . B 2 -17.754 -2.993 -1.7 1 0 ? C7 JZF 130 A 1 HETATM 13 C C8 JZF . . . B 2 -18.239 -1.87 -2.67 1 0 ? C8 JZF 130 A 1 HETATM 14 C C9 JZF . . . B 2 -17.661 -1.881 -4.13 1 0 ? C9 JZF 130 A 1 HETATM 15 O OH JZF . . . B 2 -18.137 -0.58 -2.056 1 0 ? OH JZF 130 A 1 HETATM 16 C C10 JZF . . . B 2 -18.562 -2.664 -5.089 1 0 ? C10 JZF 130 A 1 HETATM 17 C C11 JZF . . . B 2 -18.039 -2.776 -6.517 1 0 ? C11 JZF 130 A 1 HETATM 18 C C12 JZF . . . B 2 -17.777 -1.364 -7.097 1 0 ? C12 JZF 130 A 1 HETATM 19 C C13 JZF . . . B 2 -16.873 -0.504 -6.182 1 0 ? C13 JZF 130 A 1 HETATM 20 C C14 JZF . . . B 2 -17.448 -0.464 -4.745 1 0 ? C14 JZF 130 A 1 HETATM 21 C C15 JZF . . . B 2 -21.452 -6.278 1.471 1 0 ? C15 JZF 130 A 1 HETATM 22 C C16 JZF . . . B 2 -20.927 -8.002 -1.229 1 0 ? C16 JZF 130 A 1 HETATM 23 C C17 JZF . . . B 2 -21.117 -9.318 -1.999 1 0 ? C17 JZF 130 A 1 HETATM 24 C C18 JZF . . . B 2 -19.01 -3.549 -7.439 1 0 ? C18 JZF 130 A 1 HETATM 25 C C19 JZF . . . B 2 -15.398 -0.972 -6.214 1 0 ? C19 JZF 130 A 1 HETATM 26 C C21 JZF . . . B 2 -22.095 -7.486 0.822 1 0 ? C21 JZF 130 A 1 HETATM 27 H H13 JZF . . . B 2 -20.496 -3.486 -2.01 1 0 ? H13 JZF 130 A 1 HETATM 28 H H23 JZF . . . B 2 -19.699 -5.026 -2.273 1 0 ? H23 JZF 130 A 1 HETATM 29 H H4 JZF . . . B 2 -19.13 -3.014 -0.066 1 0 ? H4 JZF 130 A 1 HETATM 30 H H15 JZF . . . B 2 -17.34 -4.474 0.701 1 0 ? H15 JZF 130 A 1 HETATM 31 H H25 JZF . . . B 2 -17.684 -5.653 -0.554 1 0 ? H25 JZF 130 A 1 HETATM 32 H H17 JZF . . . B 2 -16.952 -2.587 -1.08 1 0 ? H17 JZF 130 A 1 HETATM 33 H H27 JZF . . . B 2 -17.272 -3.749 -2.327 1 0 ? H27 JZF 130 A 1 HETATM 34 H H8 JZF . . . B 2 -19.309 -2.075 -2.762 1 0 ? H8 JZF 130 A 1 HETATM 35 H H9 JZF . . . B 2 -16.705 -2.405 -4.103 1 0 ? H9 JZF 130 A 1 HETATM 36 H H1OH JZF . . . B 2 -17.194 -0.365 -1.935 1 0 ? H1OH JZF 130 A 1 HETATM 37 H H11 JZF . . . B 2 -17.099 -3.332 -6.489 1 0 ? H11 JZF 130 A 1 HETATM 38 H H112 JZF . . . B 2 -18.734 -0.85 -7.222 1 0 ? H112 JZF 130 A 1 HETATM 39 H H212 JZF . . . B 2 -17.327 -1.444 -8.09 1 0 ? H212 JZF 130 A 1 HETATM 40 H H13A JZF . . . B 2 -16.887 0.519 -6.567 1 0 ? H13A JZF 130 A 1 HETATM 41 H H114 JZF . . . B 2 -16.791 0.144 -4.131 1 0 ? H114 JZF 130 A 1 HETATM 42 H H214 JZF . . . B 2 -18.408 0.058 -4.783 1 0 ? H214 JZF 130 A 1 HETATM 43 H H115 JZF . . . B 2 -22.257 -5.597 1.759 1 0 ? H115 JZF 130 A 1 HETATM 44 H H215 JZF . . . B 2 -20.966 -6.621 2.388 1 0 ? H215 JZF 130 A 1 HETATM 45 H H116 JZF . . . B 2 -21.624 -7.246 -1.602 1 0 ? H116 JZF 130 A 1 HETATM 46 H H216 JZF . . . B 2 -19.9 -7.643 -1.337 1 0 ? H216 JZF 130 A 1 HETATM 47 H H117 JZF . . . B 2 -21.424 -10.117 -1.323 1 0 ? H117 JZF 130 A 1 HETATM 48 H H217 JZF . . . B 2 -21.882 -9.2 -2.771 1 0 ? H217 JZF 130 A 1 HETATM 49 H H317 JZF . . . B 2 -20.183 -9.611 -2.483 1 0 ? H317 JZF 130 A 1 HETATM 50 H H118 JZF . . . B 2 -18.705 -3.455 -8.485 1 0 ? H118 JZF 130 A 1 HETATM 51 H H218 JZF . . . B 2 -19.02 -4.611 -7.184 1 0 ? H218 JZF 130 A 1 HETATM 52 H H318 JZF . . . B 2 -20.029 -3.163 -7.345 1 0 ? H318 JZF 130 A 1 HETATM 53 H H119 JZF . . . B 2 -14.861 -0.711 -5.302 1 0 ? H119 JZF 130 A 1 HETATM 54 H H219 JZF . . . B 2 -15.353 -2.058 -6.333 1 0 ? H219 JZF 130 A 1 HETATM 55 H H319 JZF . . . B 2 -14.87 -0.525 -7.059 1 0 ? H319 JZF 130 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 5782 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 55 #