data_2KOQ # _model_server_result.job_id PWpWvDvuGo61phyXbLYeYA _model_server_result.datetime_utc '2024-10-19 10:18:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2koq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":101}' # _entry.id 2KOQ # _exptl.entry_id 2KOQ _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 500.544 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S-[2-[3-[[(2S)-2-hydroxy-3,3-dimethyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3R)-3-hydroxyoctanethioate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OG _struct_conn.ptnr1_label_comp_id SER _struct_conn.ptnr1_label_seq_id 40 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id SER _struct_conn.ptnr1_auth_seq_id 40 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id P24 _struct_conn.ptnr2_label_comp_id SHW _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SHW _struct_conn.ptnr2_auth_seq_id 101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.577 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C19 H37 N2 O9 P S' _chem_comp.formula_weight 500.544 _chem_comp.id SHW _chem_comp.mon_nstd_flag . _chem_comp.name 'S-[2-[3-[[(2S)-2-hydroxy-3,3-dimethyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] (3R)-3-hydroxyoctanethioate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2KOQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id SHW _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 101 _pdbx_nonpoly_scheme.pdb_mon_id SHW _pdbx_nonpoly_scheme.auth_mon_id SHW _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SHW . . . B 2 5.14 6.045 3.415 1 0.93 ? C1 SHW 101 A 1 HETATM 2 O O1 SHW . . . B 2 6.211 5.414 3.652 1 1.7 ? O1 SHW 101 A 1 HETATM 3 S S1 SHW . . . B 2 4.98 7.784 3.365 1 1.36 ? S1 SHW 101 A 1 HETATM 4 C C2 SHW . . . B 2 3.845 5.324 3.075 1 0.71 ? C2 SHW 101 A 1 HETATM 5 C C3 SHW . . . B 2 3.45 4.155 4.006 1 0.77 ? C3 SHW 101 A 1 HETATM 6 O O3 SHW . . . B 2 4.457 3.123 4.005 1 1.17 ? O3 SHW 101 A 1 HETATM 7 C C4 SHW . . . B 2 2.111 3.575 3.524 1 0.78 ? C4 SHW 101 A 1 HETATM 8 C C5 SHW . . . B 2 2.101 3.183 2.05 1 0.8 ? C5 SHW 101 A 1 HETATM 9 C C6 SHW . . . B 2 0.72 2.784 1.58 1 0.8 ? C6 SHW 101 A 1 HETATM 10 C C7 SHW . . . B 2 0.715 2.512 0.085 1 0.89 ? C7 SHW 101 A 1 HETATM 11 C C8 SHW . . . B 2 -0.693 2.227 -0.376 1 0.85 ? C8 SHW 101 A 1 HETATM 12 O O23 SHW . . . B 2 10.863 10.735 2.722 1 2.15 ? O23 SHW 101 A 1 HETATM 13 P P24 SHW . . . B 2 11.875 9.844 2.097 1 1.48 ? P24 SHW 101 A 1 HETATM 14 O O26 SHW . . . B 2 13.033 10.453 1.392 1 2.11 ? O26 SHW 101 A 1 HETATM 15 O O27 SHW . . . B 2 12.457 8.897 3.218 1 1.55 ? O27 SHW 101 A 1 HETATM 16 C C28 SHW . . . B 2 11.5 8.162 4.077 1 2.06 ? C28 SHW 101 A 1 HETATM 17 C C29 SHW . . . B 2 12.253 7.379 5.186 1 2.78 ? C29 SHW 101 A 1 HETATM 18 C C30 SHW . . . B 2 13.101 6.305 4.515 1 3.46 ? C30 SHW 101 A 1 HETATM 19 C C31 SHW . . . B 2 13.175 8.334 5.95 1 3.5 ? C31 SHW 101 A 1 HETATM 20 C C32 SHW . . . B 2 11.256 6.721 6.251 1 2.71 ? C32 SHW 101 A 1 HETATM 21 O O33 SHW . . . B 2 10.536 7.717 6.996 1 3.03 ? O33 SHW 101 A 1 HETATM 22 C C34 SHW . . . B 2 10.23 5.738 5.687 1 2.54 ? C34 SHW 101 A 1 HETATM 23 O O35 SHW . . . B 2 10.181 5.403 4.508 1 2.73 ? O35 SHW 101 A 1 HETATM 24 N N36 SHW . . . B 2 9.377 5.326 6.59 1 2.45 ? N36 SHW 101 A 1 HETATM 25 C C37 SHW . . . B 2 8.259 4.395 6.347 1 2.39 ? C37 SHW 101 A 1 HETATM 26 C C38 SHW . . . B 2 7.048 4.689 7.247 1 2.3 ? C38 SHW 101 A 1 HETATM 27 C C39 SHW . . . B 2 6.518 6.129 7.117 1 1.73 ? C39 SHW 101 A 1 HETATM 28 O O40 SHW . . . B 2 5.901 6.681 8.038 1 2.01 ? O40 SHW 101 A 1 HETATM 29 N N41 SHW . . . B 2 6.797 6.722 5.969 1 1.26 ? N41 SHW 101 A 1 HETATM 30 C C42 SHW . . . B 2 6.433 8.065 5.605 1 1.07 ? C42 SHW 101 A 1 HETATM 31 C C43 SHW . . . B 2 6.459 8.301 4.104 1 1.2 ? C43 SHW 101 A 1 HETATM 32 H H2 SHW . . . B 2 3.057 6.062 3.067 1 0.84 ? H2 SHW 101 A 1 HETATM 33 H H2A SHW . . . B 2 3.951 4.93 2.075 1 0.81 ? H2A SHW 101 A 1 HETATM 34 H H3 SHW . . . B 2 3.334 4.522 5.015 1 1.03 ? H3 SHW 101 A 1 HETATM 35 H HO3 SHW . . . B 2 5.29 3.501 3.699 1 1.33 ? HO3 SHW 101 A 1 HETATM 36 H H4 SHW . . . B 2 1.338 4.312 3.682 1 1.32 ? H4 SHW 101 A 1 HETATM 37 H H4A SHW . . . B 2 1.881 2.696 4.108 1 1.33 ? H4A SHW 101 A 1 HETATM 38 H H5 SHW . . . B 2 2.776 2.351 1.911 1 1.33 ? H5 SHW 101 A 1 HETATM 39 H H5A SHW . . . B 2 2.439 4.022 1.461 1 1.35 ? H5A SHW 101 A 1 HETATM 40 H H6 SHW . . . B 2 0.028 3.584 1.794 1 1.37 ? H6 SHW 101 A 1 HETATM 41 H H6A SHW . . . B 2 0.415 1.888 2.102 1 1.43 ? H6A SHW 101 A 1 HETATM 42 H H7 SHW . . . B 2 1.323 1.648 -0.131 1 1.58 ? H7 SHW 101 A 1 HETATM 43 H H7A SHW . . . B 2 1.089 3.379 -0.439 1 1.52 ? H7A SHW 101 A 1 HETATM 44 H H8 SHW . . . B 2 -1.32 3.079 -0.16 1 1.51 ? H8 SHW 101 A 1 HETATM 45 H H8A SHW . . . B 2 -1.074 1.361 0.144 1 1.34 ? H8A SHW 101 A 1 HETATM 46 H H8B SHW . . . B 2 -0.694 2.037 -1.439 1 1.17 ? H8B SHW 101 A 1 HETATM 47 H H28 SHW . . . B 2 10.802 8.884 4.47 1 2.39 ? H28 SHW 101 A 1 HETATM 48 H H28A SHW . . . B 2 10.963 7.464 3.453 1 2.13 ? H28A SHW 101 A 1 HETATM 49 H H30 SHW . . . B 2 12.459 5.639 3.959 1 3.73 ? H30 SHW 101 A 1 HETATM 50 H H30A SHW . . . B 2 13.637 5.746 5.268 1 3.96 ? H30A SHW 101 A 1 HETATM 51 H H30B SHW . . . B 2 13.806 6.773 3.843 1 3.68 ? H30B SHW 101 A 1 HETATM 52 H H31 SHW . . . B 2 13.701 7.788 6.719 1 3.99 ? H31 SHW 101 A 1 HETATM 53 H H31A SHW . . . B 2 12.586 9.117 6.404 1 3.72 ? H31A SHW 101 A 1 HETATM 54 H H31B SHW . . . B 2 13.888 8.77 5.266 1 3.81 ? H31B SHW 101 A 1 HETATM 55 H H32 SHW . . . B 2 11.812 6.155 6.983 1 2.83 ? H32 SHW 101 A 1 HETATM 56 H HO33 SHW . . . B 2 9.638 7.663 6.652 1 3.03 ? HO33 SHW 101 A 1 HETATM 57 H HN36 SHW . . . B 2 9.523 5.687 7.496 1 2.61 ? HN36 SHW 101 A 1 HETATM 58 H H37 SHW . . . B 2 7.945 4.503 5.319 1 2.12 ? H37 SHW 101 A 1 HETATM 59 H H37A SHW . . . B 2 8.596 3.385 6.519 1 2.9 ? H37A SHW 101 A 1 HETATM 60 H H38 SHW . . . B 2 6.261 3.999 6.978 1 2.44 ? H38 SHW 101 A 1 HETATM 61 H H38A SHW . . . B 2 7.334 4.513 8.273 1 2.7 ? H38A SHW 101 A 1 HETATM 62 H HN41 SHW . . . B 2 7.292 6.209 5.293 1 1.38 ? HN41 SHW 101 A 1 HETATM 63 H H42 SHW . . . B 2 5.475 8.352 6.008 1 1.5 ? H42 SHW 101 A 1 HETATM 64 H H42A SHW . . . B 2 7.186 8.728 6.006 1 1.16 ? H42A SHW 101 A 1 HETATM 65 H H43 SHW . . . B 2 7.316 7.836 3.642 1 1.54 ? H43 SHW 101 A 1 HETATM 66 H H43A SHW . . . B 2 6.538 9.371 3.963 1 1.74 ? H43A SHW 101 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 5514 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 66 #