data_2KRD
#
_model_server_result.job_id            1Qo5_TonnooMU0B0lw3Pqg 
_model_server_result.datetime_utc      '2025-08-02 05:01:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2krd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":91}' 
#
_entry.id    2KRD 
#
_exptl.entry_id    2KRD 
_exptl.method      'SOLUTION NMR' 
#
_entity.details                     ? 
_entity.formula_weight              340.868 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-(6-AMINOHEXYL)-5-CHLORO-1-NAPHTHALENESULFONAMIDE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 65 C ASP 65 1_555 C CA CA . C CA 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? 
metalc ? metalc2 A OD1 ASP 67 C ASP 67 1_555 C CA CA . C CA 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc3 A OG SER 69 C SER 69 1_555 C CA CA . C CA 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? 
metalc ? metalc4 A O THR 71 C THR 71 1_555 C CA CA . C CA 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? 
metalc ? metalc5 A OE1 GLU 76 C GLU 76 1_555 C CA CA . C CA 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? 
metalc ? metalc6 A OE2 GLU 76 C GLU 76 1_555 C CA CA . C CA 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? 
#
_chem_comp.formula           'C16 H21 Cl N2 O2 S' 
_chem_comp.formula_weight    340.868 
_chem_comp.id                WW7 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-(6-AMINOHEXYL)-5-CHLORO-1-NAPHTHALENESULFONAMIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S1 O1 WW7 doub 325 n n 
S1 O2 WW7 doub 326 n n 
S1 N1 WW7 sing 327 n n 
S1 C1 WW7 sing 328 n n 
N1 C11 WW7 sing 329 n n 
N1 HN1 WW7 sing 330 n n 
C4 C3 WW7 doub 331 n y 
C4 C10 WW7 sing 332 n y 
C4 H4 WW7 sing 333 n n 
C3 C2 WW7 sing 334 n y 
C3 H3 WW7 sing 335 n n 
C2 C1 WW7 doub 336 n y 
C2 H2 WW7 sing 337 n n 
C1 C9 WW7 sing 338 n y 
C9 C10 WW7 doub 339 n y 
C9 C8 WW7 sing 340 n y 
C10 C5 WW7 sing 341 n y 
CL1 C5 WW7 sing 342 n n 
C5 C6 WW7 doub 343 n y 
C6 C7 WW7 sing 344 n y 
C6 H6 WW7 sing 345 n n 
C7 C8 WW7 doub 346 n y 
C7 H7 WW7 sing 347 n n 
C8 H8 WW7 sing 348 n n 
C11 C12 WW7 sing 349 n n 
C11 H111 WW7 sing 350 n n 
C11 H112 WW7 sing 351 n n 
C12 C13 WW7 sing 352 n n 
C12 H121 WW7 sing 353 n n 
C12 H122 WW7 sing 354 n n 
C14 C13 WW7 sing 355 n n 
C14 C15 WW7 sing 356 n n 
C14 H141 WW7 sing 357 n n 
C14 H142 WW7 sing 358 n n 
C13 H131 WW7 sing 359 n n 
C13 H132 WW7 sing 360 n n 
C15 C16 WW7 sing 361 n n 
C15 H151 WW7 sing 362 n n 
C15 H152 WW7 sing 363 n n 
C16 N2 WW7 sing 364 n n 
C16 H161 WW7 sing 365 n n 
C16 H162 WW7 sing 366 n n 
N2 HN21 WW7 sing 367 n n 
N2 HN22 WW7 sing 368 n n 
#
_atom_sites.entry_id                     2KRD 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CA C 1 90 90 CA CA . 
D 4 WW7 I 1 91 91 WW7 WW7 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S1 WW7 . . . D 4 59.531 5.896 -0.924 1 18 ? S1 WW7 91 I 1 
HETATM 2 O O1 WW7 . . . D 4 60.337 5.254 0.062 1 19 ? O1 WW7 91 I 1 
HETATM 3 O O2 WW7 . . . D 4 58.142 6.117 -0.596 1 20 ? O2 WW7 91 I 1 
HETATM 4 N N1 WW7 . . . D 4 60.225 7.485 -1.247 1 21 ? N1 WW7 91 I 1 
HETATM 5 C C4 WW7 . . . D 4 59.749 3.519 -5.08 1 11 ? C4 WW7 91 I 1 
HETATM 6 C C3 WW7 . . . D 4 60.228 4.914 -4.938 1 13 ? C3 WW7 91 I 1 
HETATM 7 C C2 WW7 . . . D 4 60.15 5.629 -3.639 1 15 ? C2 WW7 91 I 1 
HETATM 8 C C1 WW7 . . . D 4 59.59 4.972 -2.438 1 17 ? C1 WW7 91 I 1 
HETATM 9 C C9 WW7 . . . D 4 59.095 3.568 -2.531 1 9 ? C9 WW7 91 I 1 
HETATM 10 C C10 WW7 . . . D 4 59.178 2.815 -3.901 1 10 ? C10 WW7 91 I 1 
HETATM 11 CL CL1 WW7 . . . D 4 58.711 0.466 -5.437 1 1 ? CL1 WW7 91 I 1 
HETATM 12 C C5 WW7 . . . D 4 58.675 1.404 -3.982 1 2 ? C5 WW7 91 I 1 
HETATM 13 C C6 WW7 . . . D 4 58.114 0.748 -2.778 1 3 ? C6 WW7 91 I 1 
HETATM 14 C C7 WW7 . . . D 4 58.043 1.48 -1.479 1 5 ? C7 WW7 91 I 1 
HETATM 15 C C8 WW7 . . . D 4 58.53 2.881 -1.357 1 7 ? C8 WW7 91 I 1 
HETATM 16 C C11 WW7 . . . D 4 61.221 8.066 -0.322 1 23 ? C11 WW7 91 I 1 
HETATM 17 C C12 WW7 . . . D 4 62.456 7.175 -0.069 1 26 ? C12 WW7 91 I 1 
HETATM 18 C C14 WW7 . . . D 4 63.704 8.149 -2.091 1 32 ? C14 WW7 91 I 1 
HETATM 19 C C13 WW7 . . . D 4 63.2 6.861 -1.394 1 29 ? C13 WW7 91 I 1 
HETATM 20 C C15 WW7 . . . D 4 64.441 7.782 -3.414 1 35 ? C15 WW7 91 I 1 
HETATM 21 C C16 WW7 . . . D 4 63.488 7.04 -4.392 1 38 ? C16 WW7 91 I 1 
HETATM 22 N N2 WW7 . . . D 4 62.314 7.835 -4.746 1 41 ? N2 WW7 91 I 1 
HETATM 23 H HN1 WW7 . . . D 4 59.462 8.131 -1.245 1 22 ? HN1 WW7 91 I 1 
HETATM 24 H H4 WW7 . . . D 4 59.812 3.054 -5.962 1 12 ? H4 WW7 91 I 1 
HETATM 25 H H3 WW7 . . . D 4 60.609 5.381 -5.724 1 14 ? H3 WW7 91 I 1 
HETATM 26 H H2 WW7 . . . D 4 60.482 6.568 -3.575 1 16 ? H2 WW7 91 I 1 
HETATM 27 H H6 WW7 . . . D 4 57.78 -0.195 -2.836 1 4 ? H6 WW7 91 I 1 
HETATM 28 H H7 WW7 . . . D 4 57.661 1.021 -0.677 1 6 ? H7 WW7 91 I 1 
HETATM 29 H H8 WW7 . . . D 4 58.475 3.358 -0.487 1 8 ? H8 WW7 91 I 1 
HETATM 30 H H111 WW7 . . . D 4 60.77 8.248 0.549 1 24 ? H111 WW7 91 I 1 
HETATM 31 H H112 WW7 . . . D 4 61.534 8.929 -0.727 1 25 ? H112 WW7 91 I 1 
HETATM 32 H H121 WW7 . . . D 4 62.155 6.317 0.339 1 27 ? H121 WW7 91 I 1 
HETATM 33 H H122 WW7 . . . D 4 63.071 7.658 0.573 1 28 ? H122 WW7 91 I 1 
HETATM 34 H H141 WW7 . . . D 4 64.323 8.63 -1.476 1 33 ? H141 WW7 91 I 1 
HETATM 35 H H142 WW7 . . . D 4 62.913 8.737 -2.294 1 34 ? H142 WW7 91 I 1 
HETATM 36 H H131 WW7 . . . D 4 62.581 6.385 -2.012 1 30 ? H131 WW7 91 I 1 
HETATM 37 H H132 WW7 . . . D 4 63.992 6.278 -1.192 1 31 ? H132 WW7 91 I 1 
HETATM 38 H H151 WW7 . . . D 4 65.224 7.202 -3.205 1 36 ? H151 WW7 91 I 1 
HETATM 39 H H152 WW7 . . . D 4 64.759 8.636 -3.844 1 37 ? H152 WW7 91 I 1 
HETATM 40 H H161 WW7 . . . D 4 63.175 6.186 -3.956 1 39 ? H161 WW7 91 I 1 
HETATM 41 H H162 WW7 . . . D 4 63.997 6.814 -5.231 1 40 ? H162 WW7 91 I 1 
HETATM 42 H HN21 WW7 . . . D 4 61.724 7.325 -5.372 1 44 ? HN21 WW7 91 I 1 
HETATM 43 H HN22 WW7 . . . D 4 62.62 8.685 -5.176 1 43 ? HN22 WW7 91 I 1 
HETATM 44 H HAB WW7 . . . D 4 61.79 8.071 -3.927 1 42 ? HAB WW7 91 I 1 
#
_model_server_stats.io_time_ms              40 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    320 
_model_server_stats.query_time_ms           6369 
_model_server_stats.encode_time_ms          35 
_model_server_stats.element_count           44 
#