data_2KSQ # _model_server_result.job_id mk0i6e4S9BcgDREFR3VqDg _model_server_result.datetime_utc '2024-11-21 13:45:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ksq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":183}' # _entry.id 2KSQ # _exptl.entry_id 2KSQ _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 264.385 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C1 MYR 1 A MYR 1 1_555 A N GLY 2 A GLY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A SG CYS 55 A CYS 55 1_555 B S1 MTN . A MTN 182 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.03 ? covale ? covale3 A SG CYS 55 A CYS 55 1_555 B S1 MTN . A MTN 182 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? covale ? covale4 A SG CYS 55 A CYS 55 1_555 B S1 MTN . A MTN 182 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.032 ? covale ? covale5 A SG CYS 59 A CYS 59 1_555 C S1 MTN . A MTN 183 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.029 ? covale ? covale6 A SG CYS 59 A CYS 59 1_555 C S1 MTN . A MTN 183 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.028 ? covale ? covale7 A SG CYS 59 A CYS 59 1_555 C S1 MTN . A MTN 183 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.03 ? covale ? covale8 A SG CYS 83 A CYS 83 1_555 D S1 MTN . A MTN 184 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.03 ? covale ? covale9 A SG CYS 83 A CYS 83 1_555 D S1 MTN . A MTN 184 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? covale ? covale10 A SG CYS 83 A CYS 83 1_555 D S1 MTN . A MTN 184 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.031 ? covale ? covale11 A SG CYS 117 A CYS 117 1_555 E S1 MTN . A MTN 185 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.03 ? covale ? covale12 A SG CYS 117 A CYS 117 1_555 E S1 MTN . A MTN 185 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? covale ? covale13 A SG CYS 117 A CYS 117 1_555 E S1 MTN . A MTN 185 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.029 ? covale ? covale14 A SG CYS 176 A CYS 176 1_555 F S1 MTN . A MTN 186 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.029 ? covale ? covale15 A SG CYS 176 A CYS 176 1_555 F S1 MTN . A MTN 186 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.03 ? covale ? covale16 A SG CYS 176 A CYS 176 1_555 F S1 MTN . A MTN 186 1_555 ? ? ? ? C ? ? ? ? ? ? ? 2.029 ? # _chem_comp.formula 'C10 H18 N O3 S2' _chem_comp.formula_weight 264.385 _chem_comp.id MTN _chem_comp.mon_nstd_flag . _chem_comp.name 'S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms MTSL # _atom_sites.entry_id 2KSQ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MTN A 1 182 55 MTN MTN . C 2 MTN A 1 183 59 MTN MTN . D 2 MTN A 1 184 83 MTN MTN . E 2 MTN A 1 185 117 MTN MTN . F 2 MTN A 1 186 176 MTN MTN . G 3 GTP A 1 187 182 GTP GTP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MTN . A . C 2 -19.106 -9.553 -9.445 1 0 ? O1 MTN 183 A 1 HETATM 2 O O1 MTN . B . C 2 -18.892 -9.608 -9.557 1 0 ? O1 MTN 183 A 1 HETATM 3 O O1 MTN . C . C 2 -18.543 -13.053 -7.899 1 0 ? O1 MTN 183 A 1 HETATM 4 N N1 MTN . A . C 2 -18.833 -8.706 -8.472 1 0 ? N1 MTN 183 A 1 HETATM 5 N N1 MTN . B . C 2 -17.858 -10.419 -9.458 1 0 ? N1 MTN 183 A 1 HETATM 6 N N1 MTN . C . C 2 -17.767 -12.077 -7.469 1 0 ? N1 MTN 183 A 1 HETATM 7 C C1 MTN . A . C 2 -19.321 -9.28 -7.218 1 0 ? C1 MTN 183 A 1 HETATM 8 C C1 MTN . B . C 2 -16.732 -9.811 -10.167 1 0 ? C1 MTN 183 A 1 HETATM 9 C C1 MTN . C . C 2 -17.638 -12.204 -6.017 1 0 ? C1 MTN 183 A 1 HETATM 10 C C2 MTN . A . C 2 -18.097 -9.805 -6.518 1 0 ? C2 MTN 183 A 1 HETATM 11 C C2 MTN . B . C 2 -15.842 -9.246 -9.09 1 0 ? C2 MTN 183 A 1 HETATM 12 C C2 MTN . C . C 2 -16.246 -11.729 -5.7 1 0 ? C2 MTN 183 A 1 HETATM 13 C C3 MTN . A . C 2 -16.992 -9.329 -7.103 1 0 ? C3 MTN 183 A 1 HETATM 14 C C3 MTN . B . C 2 -16.202 -9.732 -7.897 1 0 ? C3 MTN 183 A 1 HETATM 15 C C3 MTN . C . C 2 -15.522 -11.642 -6.82 1 0 ? C3 MTN 183 A 1 HETATM 16 C C4 MTN . A . C 2 -15.624 -10.012 -7.13 1 0 ? C4 MTN 183 A 1 HETATM 17 C C4 MTN . B . C 2 -15.999 -9.042 -6.546 1 0 ? C4 MTN 183 A 1 HETATM 18 C C4 MTN . C . C 2 -13.999 -11.758 -6.919 1 0 ? C4 MTN 183 A 1 HETATM 19 S S1 MTN . A . C 2 -14.853 -10.017 -5.47 1 0 ? S1 MTN 183 A 1 HETATM 20 S S1 MTN . B . C 2 -14.863 -9.997 -5.477 1 0 ? S1 MTN 183 A 1 HETATM 21 S S1 MTN . C . C 2 -13.186 -11.103 -5.416 1 0 ? S1 MTN 183 A 1 HETATM 22 C C5 MTN . A . C 2 -17.411 -8.424 -8.244 1 0 ? C5 MTN 183 A 1 HETATM 23 C C5 MTN . B . C 2 -17.369 -10.675 -8.097 1 0 ? C5 MTN 183 A 1 HETATM 24 C C5 MTN . C . C 2 -16.392 -12.075 -7.983 1 0 ? C5 MTN 183 A 1 HETATM 25 C C6 MTN . A . C 2 -17.276 -6.948 -7.863 1 0 ? C6 MTN 183 A 1 HETATM 26 C C6 MTN . B . C 2 -16.924 -12.137 -8.023 1 0 ? C6 MTN 183 A 1 HETATM 27 C C6 MTN . C . C 2 -16.052 -13.496 -8.436 1 0 ? C6 MTN 183 A 1 HETATM 28 C C7 MTN . A . C 2 -16.531 -8.709 -9.463 1 0 ? C7 MTN 183 A 1 HETATM 29 C C7 MTN . B . C 2 -18.42 -10.416 -7.016 1 0 ? C7 MTN 183 A 1 HETATM 30 C C7 MTN . C . C 2 -16.183 -11.113 -9.156 1 0 ? C7 MTN 183 A 1 HETATM 31 C C8 MTN . A . C 2 -20.302 -10.438 -7.408 1 0 ? C8 MTN 183 A 1 HETATM 32 C C8 MTN . B . C 2 -15.916 -10.803 -10.997 1 0 ? C8 MTN 183 A 1 HETATM 33 C C8 MTN . C . C 2 -18.631 -11.345 -5.232 1 0 ? C8 MTN 183 A 1 HETATM 34 C C9 MTN . A . C 2 -19.979 -8.18 -6.381 1 0 ? C9 MTN 183 A 1 HETATM 35 C C9 MTN . B . C 2 -17.248 -8.687 -11.07 1 0 ? C9 MTN 183 A 1 HETATM 36 C C9 MTN . C . C 2 -17.801 -13.673 -5.62 1 0 ? C9 MTN 183 A 1 HETATM 37 H H2 MTN . A . C 2 -18.069 -10.485 -5.786 1 0 ? H2 MTN 183 A 1 HETATM 38 H H2 MTN . B . C 2 -15.152 -8.53 -9.195 1 0 ? H2 MTN 183 A 1 HETATM 39 H H2 MTN . C . C 2 -15.905 -11.419 -4.812 1 0 ? H2 MTN 183 A 1 HETATM 40 H H41 MTN . A . C 2 -15.731 -11.038 -7.458 1 0 ? H41 MTN 183 A 1 HETATM 41 H H41 MTN . B . C 2 -15.577 -8.056 -6.699 1 0 ? H41 MTN 183 A 1 HETATM 42 H H41 MTN . C . C 2 -13.717 -12.796 -7.034 1 0 ? H41 MTN 183 A 1 HETATM 43 H H42 MTN . A . C 2 -14.978 -9.478 -7.806 1 0 ? H42 MTN 183 A 1 HETATM 44 H H42 MTN . B . C 2 -16.951 -8.957 -6.049 1 0 ? H42 MTN 183 A 1 HETATM 45 H H42 MTN . C . C 2 -13.659 -11.191 -7.769 1 0 ? H42 MTN 183 A 1 HETATM 46 H H61 MTN . A . C 2 -17.606 -6.332 -8.686 1 0 ? H61 MTN 183 A 1 HETATM 47 H H61 MTN . B . C 2 -17.267 -12.663 -8.902 1 0 ? H61 MTN 183 A 1 HETATM 48 H H61 MTN . C . C 2 -15.47 -13.988 -7.669 1 0 ? H61 MTN 183 A 1 HETATM 49 H H62 MTN . A . C 2 -16.242 -6.727 -7.64 1 0 ? H62 MTN 183 A 1 HETATM 50 H H62 MTN . B . C 2 -17.343 -12.598 -7.141 1 0 ? H62 MTN 183 A 1 HETATM 51 H H62 MTN . C . C 2 -15.48 -13.456 -9.351 1 0 ? H62 MTN 183 A 1 HETATM 52 H H63 MTN . A . C 2 -17.883 -6.744 -6.993 1 0 ? H63 MTN 183 A 1 HETATM 53 H H63 MTN . B . C 2 -15.845 -12.182 -7.975 1 0 ? H63 MTN 183 A 1 HETATM 54 H H63 MTN . C . C 2 -16.964 -14.049 -8.605 1 0 ? H63 MTN 183 A 1 HETATM 55 H H71 MTN . A . C 2 -16.994 -9.473 -10.071 1 0 ? H71 MTN 183 A 1 HETATM 56 H H71 MTN . B . C 2 -19.305 -10.996 -7.227 1 0 ? H71 MTN 183 A 1 HETATM 57 H H71 MTN . C . C 2 -15.181 -10.71 -9.117 1 0 ? H71 MTN 183 A 1 HETATM 58 H H72 MTN . A . C 2 -15.56 -9.05 -9.136 1 0 ? H72 MTN 183 A 1 HETATM 59 H H72 MTN . B . C 2 -18.671 -9.366 -7.003 1 0 ? H72 MTN 183 A 1 HETATM 60 H H72 MTN . C . C 2 -16.898 -10.305 -9.09 1 0 ? H72 MTN 183 A 1 HETATM 61 H H73 MTN . A . C 2 -16.418 -7.807 -10.045 1 0 ? H73 MTN 183 A 1 HETATM 62 H H73 MTN . B . C 2 -18.022 -10.704 -6.053 1 0 ? H73 MTN 183 A 1 HETATM 63 H H73 MTN . C . C 2 -16.323 -11.643 -10.085 1 0 ? H73 MTN 183 A 1 HETATM 64 H H81 MTN . A . C 2 -20.857 -10.294 -8.324 1 0 ? H81 MTN 183 A 1 HETATM 65 H H81 MTN . B . C 2 -14.929 -10.401 -11.17 1 0 ? H81 MTN 183 A 1 HETATM 66 H H81 MTN . C . C 2 -18.889 -11.844 -4.309 1 0 ? H81 MTN 183 A 1 HETATM 67 H H82 MTN . A . C 2 -20.986 -10.471 -6.574 1 0 ? H82 MTN 183 A 1 HETATM 68 H H82 MTN . B . C 2 -16.407 -10.972 -11.944 1 0 ? H82 MTN 183 A 1 HETATM 69 H H82 MTN . C . C 2 -19.525 -11.197 -5.821 1 0 ? H82 MTN 183 A 1 HETATM 70 H H83 MTN . A . C 2 -19.754 -11.368 -7.462 1 0 ? H83 MTN 183 A 1 HETATM 71 H H83 MTN . B . C 2 -15.835 -11.739 -10.462 1 0 ? H83 MTN 183 A 1 HETATM 72 H H83 MTN . C . C 2 -18.184 -10.388 -5.011 1 0 ? H83 MTN 183 A 1 HETATM 73 H H91 MTN . A . C 2 -20.998 -8.459 -6.156 1 0 ? H91 MTN 183 A 1 HETATM 74 H H91 MTN . B . C 2 -16.725 -7.772 -10.839 1 0 ? H91 MTN 183 A 1 HETATM 75 H H91 MTN . C . C 2 -18.85 -13.931 -5.615 1 0 ? H91 MTN 183 A 1 HETATM 76 H H92 MTN . A . C 2 -19.974 -7.254 -6.936 1 0 ? H92 MTN 183 A 1 HETATM 77 H H92 MTN . B . C 2 -18.307 -8.549 -10.902 1 0 ? H92 MTN 183 A 1 HETATM 78 H H92 MTN . C . C 2 -17.388 -13.828 -4.636 1 0 ? H92 MTN 183 A 1 HETATM 79 H H93 MTN . A . C 2 -19.429 -8.052 -5.46 1 0 ? H93 MTN 183 A 1 HETATM 80 H H93 MTN . B . C 2 -17.08 -8.949 -12.104 1 0 ? H93 MTN 183 A 1 HETATM 81 H H93 MTN . C . C 2 -17.281 -14.298 -6.333 1 0 ? H93 MTN 183 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 71 _model_server_stats.query_time_ms 6025 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 81 #